BLASTX nr result
ID: Rheum21_contig00021561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021561
(777 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding prot... 61 5e-07
ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot... 61 5e-07
emb|CBI21552.3| unnamed protein product [Vitis vinifera] 61 5e-07
gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indi... 61 5e-07
emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera] 61 5e-07
ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group] g... 61 5e-07
gb|ACI43571.1| RBP50 [Cucurbita maxima] 60 6e-07
ref|XP_006665040.1| PREDICTED: polypyrimidine tract-binding prot... 60 8e-07
ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding prot... 60 1e-06
ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding prot... 60 1e-06
ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding prot... 60 1e-06
ref|XP_006386305.1| hypothetical protein POPTR_0002s06660g [Popu... 59 1e-06
ref|XP_002302167.2| polypyrimidine tract-binding family protein ... 59 1e-06
gb|EMT30091.1| Polypyrimidine tract-binding protein-3-like prote... 59 1e-06
gb|EMS55211.1| Polypyrimidine tract-binding protein-like protein... 59 1e-06
gb|EMJ02235.1| hypothetical protein PRUPE_ppa005775mg [Prunus pe... 59 1e-06
gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays] 59 1e-06
gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays] g... 59 1e-06
gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays] 59 1e-06
gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays] 59 1e-06
>ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -2
Query: 713 RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVKALECY 534
R L V IH L Y I+ EV + VF G +E I TF A F + + +Q R+ AV A+
Sbjct: 67 RILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINAL 126
Query: 533 DGRYIYDGCCLMEL 492
GR IYDGCC +++
Sbjct: 127 QGRNIYDGCCQLDI 140
>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -2
Query: 713 RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVKALECY 534
R L V IH L Y I+ EV + VF G +E I TF A F + + +Q R+ AV A+
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINAL 162
Query: 533 DGRYIYDGCCLMEL 492
GR IYDGCC +++
Sbjct: 163 QGRNIYDGCCQLDI 176
>emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -2
Query: 713 RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVKALECY 534
R L V IH L Y I+ EV + VF G +E I TF A F + + +Q R+ AV A+
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINAL 162
Query: 533 DGRYIYDGCCLMEL 492
GR IYDGCC +++
Sbjct: 163 QGRNIYDGCCQLDI 176
>gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = -2
Query: 728 QKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVK 549
Q+E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ A++
Sbjct: 96 QEEPNRILLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQ 155
Query: 548 ALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 156 AYGALHGRNIYDGCCQLDI 174
>emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -2
Query: 713 RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVKALECY 534
R L V IH L Y I+ EV + VF G +E I TF A F + + +Q R+ AV A+
Sbjct: 103 RILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINAL 162
Query: 533 DGRYIYDGCCLMEL 492
GR IYDGCC +++
Sbjct: 163 QGRNIYDGCCQLDI 176
>ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa
Japonica Group] gi|215697244|dbj|BAG91238.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 439
Score = 60.8 bits (146), Expect = 5e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = -2
Query: 728 QKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVK 549
Q+E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ A++
Sbjct: 92 QEEPNRILLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQ 151
Query: 548 ALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 152 AYGALHGRNIYDGCCQLDI 170
>gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 60.5 bits (145), Expect = 6e-07
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ A+
Sbjct: 93 RGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAI 152
Query: 551 KALECYDGRYIYDGCCLMELSLEVPASGPLIKIEAPIEDSR-QDFVAEVLQGKPSTTPA 378
A GR IYDGCC +++ L +++ + R +DF L +P P+
Sbjct: 153 SARTALQGRNIYDGCCQLDIQF-----SNLDELQVNYNNERSRDFTNPSLPSEPKGRPS 206
>ref|XP_006665040.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Oryza brachyantha]
Length = 443
Score = 60.1 bits (144), Expect = 8e-07
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = -2
Query: 728 QKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVK 549
Q+E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R A++
Sbjct: 96 QEEPNRILLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRPSAIQ 155
Query: 548 ALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 156 AYGALHGRNIYDGCCQLDI 174
>ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 59.7 bits (143), Expect = 1e-06
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 93 RGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAV 152
Query: 551 KALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 153 SARTALQGRNIYDGCCQLDI 172
>ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 59.7 bits (143), Expect = 1e-06
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 57 RGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAV 116
Query: 551 KALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 117 SARTALQGRNIYDGCCQLDI 136
>ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 59.7 bits (143), Expect = 1e-06
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 95 RGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAV 154
Query: 551 KALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 155 SARTALQGRNIYDGCCQLDI 174
>ref|XP_006386305.1| hypothetical protein POPTR_0002s06660g [Populus trichocarpa]
gi|550344425|gb|ERP64102.1| hypothetical protein
POPTR_0002s06660g [Populus trichocarpa]
Length = 437
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 93 RGDEPNRILLVTIHHMLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQCAV 152
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 153 QARTSLQGRNIYDGCCQLDI 172
>ref|XP_002302167.2| polypyrimidine tract-binding family protein [Populus trichocarpa]
gi|550344424|gb|EEE81440.2| polypyrimidine tract-binding
family protein [Populus trichocarpa]
Length = 436
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 93 RGDEPNRILLVTIHHMLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQCAV 152
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 153 QARTSLQGRNIYDGCCQLDI 172
>gb|EMT30091.1| Polypyrimidine tract-binding protein-3-like protein [Aegilops
tauschii]
Length = 506
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = -2
Query: 728 QKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVK 549
Q E R L V +H + Y ++ EV + VF G +E I TF A F + + FQ R+ A++
Sbjct: 126 QDEPNRILLVTVHHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQ 185
Query: 548 ALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 186 AAGALHGRNIYDGCCQLDI 204
>gb|EMS55211.1| Polypyrimidine tract-binding protein-like protein 3 [Triticum
urartu]
Length = 528
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = -2
Query: 728 QKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAVK 549
Q E R L V +H + Y ++ EV + VF G +E I TF A F + + FQ R+ A++
Sbjct: 96 QDEPNRILLVTVHHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQ 155
Query: 548 ALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 156 AAGALHGRNIYDGCCQLDI 174
>gb|EMJ02235.1| hypothetical protein PRUPE_ppa005775mg [Prunus persica]
Length = 444
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
R E R L V IH + Y I+ EV + VF G +E I TF A F + + +Q R+ AV
Sbjct: 93 RGDEPNRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQSRQSAV 152
Query: 551 KALECYDGRYIYDGCCLMEL 492
A GR IYDGCC +++
Sbjct: 153 AARTALQGRNIYDGCCQLDI 172
>gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
++ E R L V IH + Y I+ EV + VF G +E I TF A F + + F R+ AV
Sbjct: 96 QESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAV 155
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 156 EAFGSLHGRNIYDGCCQLDI 175
>gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein
ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
++ E R L V IH + Y I+ EV + VF G +E I TF A F + + F R+ AV
Sbjct: 96 QESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAV 155
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 156 EAFGSLHGRNIYDGCCQLDI 175
>gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
++ E R L V IH + Y I+ EV + VF G +E I TF A F + + F R+ AV
Sbjct: 96 QESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAV 155
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 156 EAFGSLHGRNIYDGCCQLDI 175
>gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -2
Query: 731 RQKEA*RTLRVKIHLLEYTISCEVSNHVFLRIGNIESIETFGNDA*FHSSVCFQERKLAV 552
++ E R L V IH + Y I+ EV + VF G +E I TF A F + + F R+ AV
Sbjct: 98 QESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAV 157
Query: 551 KALECYDGRYIYDGCCLMEL 492
+A GR IYDGCC +++
Sbjct: 158 EAFGSLHGRNIYDGCCQLDI 177