BLASTX nr result
ID: Rheum21_contig00021497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021497
(778 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 268 2e-69
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 264 3e-68
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe... 261 2e-67
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 258 1e-66
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof... 250 3e-64
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 250 4e-64
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 250 4e-64
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus... 248 1e-63
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 248 1e-63
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 248 2e-63
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 248 2e-63
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 244 2e-62
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 241 3e-61
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 241 3e-61
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 238 2e-60
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 229 8e-58
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 223 7e-56
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 219 8e-55
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 218 2e-54
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 200 5e-49
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 268 bits (685), Expect = 2e-69
Identities = 132/202 (65%), Positives = 161/202 (79%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++D ME+KGL +VVSYNTII C RRAYQLF+EM +KG+ PDVVTFTILI AFL
Sbjct: 311 LMVDSMESKGLANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFL 370
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
GS+ VA+++L MT MGLLPDC+ T I+DHLCK K+ MA S F DMVE+GI PDVI
Sbjct: 371 SVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVI 430
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN IINGLCK+ RVSEA+ L+ MQ+RGLC DEVT+KLIIG LI+EN LPLACR WDQM
Sbjct: 431 SYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQM 490
Query: 546 MEKGYTLDRAVSQSLINAMHRR 611
MEKG+TL+ A+S++LINA++ +
Sbjct: 491 MEKGFTLEPALSETLINAINSK 512
Score = 92.8 bits (229), Expect = 1e-16
Identities = 54/172 (31%), Positives = 87/172 (50%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN++ISG C + +A + M R G PD+VT+ +L+ + A K++ M
Sbjct: 222 YNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTME 281
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
++G+ PD ++ LC+ + D A+ D +E + +V+ YN II CK RV
Sbjct: 282 RIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVR 341
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLD 569
A QLF M+ +G+ D VT+ ++I A + + +A R DQM G D
Sbjct: 342 RAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPD 393
Score = 83.6 bits (205), Expect = 7e-14
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL+ M+ G + D+ ++N ++ LC + A ++F+ M +G PDVVT+TILID
Sbjct: 101 LLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLC 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
A + M + G +PD + T ++ LC+ KVD+A+ ++ + + +
Sbjct: 161 KAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNL 220
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLII 488
+YN +I+G C++ R+ +A + M+ G D VTY +++
Sbjct: 221 IYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLL 261
Score = 79.3 bits (194), Expect = 1e-12
Identities = 47/169 (27%), Positives = 78/169 (46%)
Frame = +3
Query: 51 SYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHM 230
+Y+ IS LC ++ +L ++M + G +PD+ F I ++ E +A ++ M
Sbjct: 81 TYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRM 140
Query: 231 TQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRV 410
+ G PD V T +ID LCK K D A + M++KG +PD I ++ GLC+ +V
Sbjct: 141 VERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKV 200
Query: 411 SEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKG 557
A +L + + + Y +I R + A D M G
Sbjct: 201 DLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDG 249
Score = 76.6 bits (187), Expect = 9e-12
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
V YN I L A + +M +G T++ I A + ++ K+L
Sbjct: 45 VDYNRFIGVLARHSRLDLAEHYYHKMAPQGFSLYPFTYSRFISALCAVKNFLLVEKLLED 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G +PD ++ LC +V +A FR MVE+G PDV+ Y ++I+GLCK+ +
Sbjct: 105 MDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWK 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
A++ + M +G D + ++ L + LA ++ + + S
Sbjct: 165 FDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNS 224
Query: 588 LINAMHRRSTSE*YSDASDLNYR-FCTYPVPTYEL*DLFC 704
LI+ R + D R C + TY + ++C
Sbjct: 225 LISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYC 264
Score = 75.1 bits (183), Expect = 2e-11
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Frame = +3
Query: 21 METKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGS 197
M KG + D ++ ++ GLC+ AY+L + V + + + LI F G
Sbjct: 175 MIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGR 234
Query: 198 TIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNV 377
A+ I M + G PD V ++ + C +D A M G+ PD YN
Sbjct: 235 IDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNK 294
Query: 378 IINGLCKSSRVSEA-LQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
++ GLC++ R +A L + +M+S+GL A+ V+Y IIGA + + A + +++M +K
Sbjct: 295 LLKGLCRAHRPDKAYLLMVDSMESKGL-ANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQK 353
Query: 555 GYTLDRAVSQSLINA 599
G D LI A
Sbjct: 354 GIEPDVVTFTILIKA 368
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 264 bits (674), Expect = 3e-68
Identities = 129/205 (62%), Positives = 160/205 (78%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
++++ ME KGL DVVSYNTII LC + T+RAY+LF+EMG KG+ PDVVTFTILI AFL
Sbjct: 311 MMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFL 370
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EGS+ +A+K+L MT +GLLPD VL TTI+DHLCK K+ MA S F DMVE GI PDV+
Sbjct: 371 REGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVV 430
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +INGLC++SRVSEA+ L+ +M + G C DEVT+KLIIG LI E L +ACR WDQM
Sbjct: 431 SYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQM 490
Query: 546 MEKGYTLDRAVSQSLINAMHRRSTS 620
MEKG+TLD AVS++L+NA+H S
Sbjct: 491 MEKGFTLDGAVSETLVNAIHSNDAS 515
Score = 99.8 bits (247), Expect = 9e-19
Identities = 54/181 (29%), Positives = 94/181 (51%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN++I+G C + +A + M R G PD+VT+ +L++ E A ++ M
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+ G+ PD ++ LCK ++D A+ + +E + DV+ YN II LC +S
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTK 341
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
A +LF M +G+ D VT+ ++I A +RE + +A + DQM G DR + +++
Sbjct: 342 RAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIV 401
Query: 594 N 596
+
Sbjct: 402 D 402
Score = 90.9 bits (224), Expect = 4e-16
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVT--------------------- 158
D+V+Y +I+GLC + A ++++ M RKG PD
Sbjct: 148 DIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELT 207
Query: 159 --------------FTILIDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKN 296
+ LI+ F G A+ I+ M + G PD V ++++ C
Sbjct: 208 VGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDE 267
Query: 297 EKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEALQLFGN-MQSRGLCADEVT 473
++ A + + M G+ PDV YN ++ GLCK++R+ +A + N M+++GLC D V+
Sbjct: 268 LLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC-DVVS 326
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHRRSTS 620
Y II AL ++ A + +++M KG T D LI A R +S
Sbjct: 327 YNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSS 375
Score = 85.1 bits (209), Expect = 2e-14
Identities = 48/183 (26%), Positives = 86/183 (46%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L A Q + M +G + T++ I + ++ K+L
Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G +PD ++ LC ++D+A + MVEKG PD++ Y ++INGLC++ R
Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
A++++ NM +G DE + ++ L + + LA M +++ S
Sbjct: 165 FDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNS 224
Query: 588 LIN 596
LIN
Sbjct: 225 LIN 227
Score = 79.0 bits (193), Expect = 2e-12
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Frame = +3
Query: 39 LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKI 218
L+ +Y+ ISGLC ++ +L ++M R G VPD+ + I ++ E VA +
Sbjct: 77 LNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGV 136
Query: 219 LGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCK 398
+ M + G PD V T +I+ LC+ + D A +R+MV KG PD ++ GLC
Sbjct: 137 VQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCH 196
Query: 399 SSRVSEALQL-FGNMQSRGLCADEVTYKLIIG 491
+V A +L G M+ R + + LI G
Sbjct: 197 DGKVDLAYELTVGAMRGRIKFSKSIYNSLING 228
Score = 67.8 bits (164), Expect = 4e-09
Identities = 43/182 (23%), Positives = 76/182 (41%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
++Y IS + +A + F EM + + + I + + +A +
Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M G + + I LCK + + DM G +PD+ YN+ +N LC ++
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
+ AL + M +G D VTY ++I L R A W M+ KG++ D ++
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189
Query: 588 LI 593
L+
Sbjct: 190 LV 191
>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 261 bits (666), Expect = 2e-67
Identities = 128/201 (63%), Positives = 159/201 (79%), Gaps = 1/201 (0%)
Frame = +3
Query: 3 YLLLDI-METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDA 179
YLL+ ME KGL +VVSYNTII+ C + T RAY+LF+EMG+KG +PDVVTFTILI+A
Sbjct: 309 YLLMRTRMEPKGLCNVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEA 368
Query: 180 FLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPD 359
FL EGS+ +A K+L MT MGLLPD + TTI+DHLCK+ K+ MA+S F DM+EKGI PD
Sbjct: 369 FLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPD 428
Query: 360 VIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWD 539
+ +N +INGLCK+SRVSEA+ L+ MQ+RG C DEVT+KLIIG LIREN L +ACR WD
Sbjct: 429 AVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACRVWD 488
Query: 540 QMMEKGYTLDRAVSQSLINAM 602
QMMEKG+TLD AVS+ L+ +
Sbjct: 489 QMMEKGFTLDGAVSERLMKLL 509
Score = 94.4 bits (233), Expect = 4e-17
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Frame = +3
Query: 12 LDIMETKGLLDV--VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L I E KG + + YNT+I+G C + +A + M R G D+VT +L+
Sbjct: 206 LVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCC 265
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
E A K++ M + G+ PD ++ LC+ + D A+ R +E + +V+
Sbjct: 266 NEFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVV 325
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN II C++ R A +LF M +G D VT+ ++I A +RE + +A + DQM
Sbjct: 326 SYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQM 385
Query: 546 MEKGYTLDRAVSQSLIN 596
G DR ++++
Sbjct: 386 TVMGLLPDRIFYTTIVD 402
Score = 85.9 bits (211), Expect = 1e-14
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Frame = +3
Query: 39 LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKI 218
L +Y+ ISGLC R+ +L ++M R G VPD+ F I ++ E A ++
Sbjct: 77 LSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEV 136
Query: 219 LGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI----------- 365
M G PD V T +ID LCK + D A + M+ KG PD I
Sbjct: 137 FHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCD 196
Query: 366 ------------------------MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVT 473
MYN +ING C++ R+ +A + M+ G +D VT
Sbjct: 197 GGKVDLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVT 256
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLD 569
+ +++ E L A + +M G D
Sbjct: 257 HNVLLKYCCNEFMLEEAEKLMKKMERSGMEPD 288
Score = 84.3 bits (207), Expect = 4e-14
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTIL----------------- 170
DVVSY +I GLC +R +A ++ M RKG PD + T L
Sbjct: 148 DVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLV 207
Query: 171 ------------------IDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKN 296
I+ F G A+ I M + G D V ++ + C
Sbjct: 208 IGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNE 267
Query: 297 EKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA-LQLFGNMQSRGLCADEVT 473
++ A + M G+ PDV YN ++ GLC+++R +A L + M+ +GLC + V+
Sbjct: 268 FMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLC-NVVS 326
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHRRSTSE 623
Y II A R + A + +++M +KG D LI A R +S+
Sbjct: 327 YNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSD 376
Score = 69.7 bits (169), Expect = 1e-09
Identities = 42/165 (25%), Positives = 68/165 (41%)
Frame = +3
Query: 99 RAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTII 278
+A Q+F EM R + + I + +A M G + I
Sbjct: 27 QALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAFTYSRFI 86
Query: 279 DHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEALQLFGNMQSRGLC 458
LCK + RDM G +PD+ +N+ +N LC+ +R AL++F M +G
Sbjct: 87 SGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGRE 146
Query: 459 ADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
D V+Y ++I L + A W M+ KG+ D +L+
Sbjct: 147 PDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALV 191
Score = 69.3 bits (168), Expect = 1e-09
Identities = 44/187 (23%), Positives = 80/187 (42%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L A + EM +G T++ I + + K++
Sbjct: 45 IDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRD 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G +PD ++ LC+ + A F MV+KG PDV+ Y ++I+GLCK+ +
Sbjct: 105 MDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQ 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
+A+ ++ +M +G D + ++ L + LA M+ + +
Sbjct: 165 FDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLMYNT 224
Query: 588 LINAMHR 608
LIN R
Sbjct: 225 LINGFCR 231
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 258 bits (660), Expect = 1e-66
Identities = 119/199 (59%), Positives = 158/199 (79%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
++++ M+TKG+ DVVSYNT+I+ C +R TR+ Y+LF+EM KG+ PD+VTF ILIDAFL
Sbjct: 316 MMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFL 375
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EGST V +K+L MT+M +LPDC+ T ++DHLCKN KVD+A S FRDMVE G+ PDVI
Sbjct: 376 REGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVI 435
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN ++NG CK+SRV +A+ LF MQS+GL DEVTYKLI+G LIR + LACR WDQM
Sbjct: 436 SYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Query: 546 MEKGYTLDRAVSQSLINAM 602
ME+G+TL+R +S++L+NA+
Sbjct: 496 MERGFTLNRHLSETLVNAI 514
Score = 98.6 bits (244), Expect = 2e-18
Identities = 56/188 (29%), Positives = 93/188 (49%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LLLD+ + D+ ++NT ++ LC A +LF M KG PDVV++TI+IDA
Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC 165
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
A K+ + GL PD ++ LC +VD+A+ +++ G+ + +
Sbjct: 166 NAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +I+G C+ RV +A+++ M G D VTY +++ E + A R + M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 546 MEKGYTLD 569
G D
Sbjct: 286 ERSGVEPD 293
Score = 92.8 bits (229), Expect = 1e-16
Identities = 50/164 (30%), Positives = 83/164 (50%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN +I G C +A ++ M R G VPD+VT+ IL++ EG A +++ M
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+ G+ PD ++ CK VD A + ++ M DV+ YN +I CK+ R
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR 346
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+ +LF M +G+ D VT+ ++I A +RE + + + D+M
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390
Score = 90.9 bits (224), Expect = 4e-16
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Frame = +3
Query: 63 IISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMTQMG 242
++ GLC AY+L + + GV + + + LID F G A KI M++ G
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 243 LLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA- 419
+PD V ++++ C+ VD A M G+ PD+ YN ++ G CK++ V A
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314
Query: 420 LQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINA 599
L + MQ++G+C D V+Y +I A + +++M KG D LI+A
Sbjct: 315 LMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDA 373
Query: 600 MHRRSTS 620
R ++
Sbjct: 374 FLREGST 380
Score = 65.1 bits (157), Expect = 3e-08
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 8/210 (3%)
Frame = +3
Query: 3 YLLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPD-----VVTFTI 167
YL + E+ + V YN I L A+ + R+ V+P T++
Sbjct: 31 YLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYY----RRHVIPRGFSLLPFTYSR 86
Query: 168 LIDAFLMEGSTI---VARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMV 338
I A + I + +L M +G +PD T ++ LC+ +++ A F M
Sbjct: 87 FISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMP 146
Query: 339 EKGIMPDVIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLP 518
KG PDV+ Y +II+ LC + R EA +++ + +GL D ++ L +
Sbjct: 147 SKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVD 206
Query: 519 LACRFWDQMMEKGYTLDRAVSQSLINAMHR 608
LA +++ G ++ V +LI+ R
Sbjct: 207 LAYELVVGVIKGGVKVNSLVYNALIDGFCR 236
Score = 62.0 bits (149), Expect = 2e-07
Identities = 33/132 (25%), Positives = 65/132 (49%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL ++ + + L D + Y ++ LC + A+ +F++M GV PDV+++ L++ F
Sbjct: 386 LLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFC 445
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
+ A + M GL PD V I+ L + +K+ +A + M+E+G +
Sbjct: 446 KTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRH 505
Query: 366 MYNVIINGLCKS 401
+ ++N + S
Sbjct: 506 LSETLVNAIQSS 517
>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
Length = 516
Score = 250 bits (639), Expect = 3e-64
Identities = 120/200 (60%), Positives = 151/200 (75%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L+++ ME GL D VS+NTII C +AY+LF+EMGRKG+ PDVVTFT LI A L
Sbjct: 312 LMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKACL 371
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EGS+ +A+ +L M+ MGLLPDC+ T IIDHLCKN KV+MA S F DM+++G+ PDV+
Sbjct: 372 TEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVV 431
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +ING CKS+R SEA+ L+ MQ+RG DEVT+KLIIG LIRE L AC+ WDQM
Sbjct: 432 SYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQM 491
Query: 546 MEKGYTLDRAVSQSLINAMH 605
MEKG+TLD AVS++LINA+H
Sbjct: 492 MEKGFTLDGAVSETLINAIH 511
Score = 83.2 bits (204), Expect = 9e-14
Identities = 51/190 (26%), Positives = 87/190 (45%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN +ISG C R +A + M + G PD+VT+ +L++ E A K++ M
Sbjct: 223 YNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKME 282
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+ G+ PD +I C + D A + +E + D + +N II CK +
Sbjct: 283 RSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIG 342
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
+A +LF M +G+ D VT+ +I A + E + +A D+M G D ++I
Sbjct: 343 KAYKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAII 402
Query: 594 NAMHRRSTSE 623
+ + + E
Sbjct: 403 DHLCKNGKVE 412
Score = 80.9 bits (198), Expect = 5e-13
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL D+ + + D+ ++N ++ LC + A ++F + +KG PDVVT+TI+ID
Sbjct: 101 LLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLC 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
G A M G PD ++ LC KVD+A+ ++++ G I
Sbjct: 161 KAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEFST 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G C+ R+ +A + M G D VTY +++ E L A + +
Sbjct: 221 LLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKK 280
Query: 543 MMEKG 557
M G
Sbjct: 281 MERSG 285
Score = 65.5 bits (158), Expect = 2e-08
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Frame = +3
Query: 48 VSYNTIISGLC-DSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILG 224
+ YN I L DSR Y FQ M +G T++ I A + +L
Sbjct: 45 LDYNRFIGVLLRDSRFDLAEYYYFQ-MFPQGFSLTPFTYSRFISALCPVKNFNFIELLLN 103
Query: 225 HMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSS 404
M ++ +PD ++ LC+ +K+++A F +V+KG PDV+ Y ++I+GLCK+
Sbjct: 104 DMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAG 163
Query: 405 RVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQ 584
+ A+ + M +G D ++ L + LA ++++ G D S
Sbjct: 164 KFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGG---DIEFST 220
Query: 585 SLINAM 602
L NA+
Sbjct: 221 LLYNAL 226
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 250 bits (638), Expect = 4e-64
Identities = 123/200 (61%), Positives = 161/200 (80%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++D METKGL+DVVSYNTII LC + +++AY LF+EM +K +VPDVVTFTILI+A L
Sbjct: 311 LMVDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASL 370
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EG++ VA+ ++ MT MGL PD VL T+IID+LCK K+ +A S FRDMVE+G+ PDVI
Sbjct: 371 KEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVI 430
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I+G CK+SRV+EAL L+ +MQ+R L DE+T+KLIIG LI+E NL +AC WDQM
Sbjct: 431 SYNALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVACAIWDQM 490
Query: 546 MEKGYTLDRAVSQSLINAMH 605
MEKG+TLDR +SQ+LINA++
Sbjct: 491 MEKGFTLDRDLSQTLINAIN 510
Score = 99.4 bits (246), Expect = 1e-18
Identities = 60/197 (30%), Positives = 97/197 (49%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L L I+ + + YNT+I+G C + +A + M R G PD+VT+ + ++
Sbjct: 206 LTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCC 265
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
E A K++ M GL PD ++ CK ++D A+ D +E + DV+
Sbjct: 266 NELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVV 325
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN II LCK+ +A LF M+ + + D VT+ ++I A ++E N +A DQM
Sbjct: 326 SYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQM 385
Query: 546 MEKGYTLDRAVSQSLIN 596
G DR + S+I+
Sbjct: 386 TSMGLFPDRVLYTSIID 402
Score = 86.3 bits (212), Expect = 1e-14
Identities = 56/191 (29%), Positives = 89/191 (46%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKIL 221
D+V+YN ++ C+ A +L ++M G+ PD ++ L+ F A K++
Sbjct: 253 DLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLM 312
Query: 222 GHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKS 401
+ L D V TII LCK + A++ F +M +K I+PDV+ + ++I K
Sbjct: 313 VDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKE 372
Query: 402 SRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVS 581
S A L M S GL D V Y II L + L +A + M+E+G D
Sbjct: 373 GNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISY 432
Query: 582 QSLINAMHRRS 614
+LI+ + S
Sbjct: 433 NALISGFCKAS 443
Score = 79.0 bits (193), Expect = 2e-12
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL+ M+ G++ + +YN ++ LC A +L + MG KG PDVV++TI+I
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G A ++ M + GL PD ++ LC + +VD+A+ ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTE 220
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +ING C++ R+ +A + M+ G D VTY + + E L A + ++M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKM 280
Query: 546 MEKGYTLD 569
G D
Sbjct: 281 EGNGLEPD 288
Score = 78.2 bits (191), Expect = 3e-12
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L+ +M KG DVVSY +ISGLC A +++ M RKG+ PD L+
Sbjct: 136 LIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLC 195
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G +A ++ + + + + + T+I+ C+ ++D A + M G PD++
Sbjct: 196 GSGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLV 255
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YNV +N C + EA++L M+ GL D +Y ++ + N L A +
Sbjct: 256 TYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDK 315
Query: 546 MEKGYTLDRAVSQSLINAMHRRSTSE 623
ME +D ++I A+ + S+
Sbjct: 316 METKGLVDVVSYNTIIRALCKTDHSK 341
Score = 72.0 bits (175), Expect = 2e-10
Identities = 47/187 (25%), Positives = 84/187 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN II L + A + EM G + +T++ I + + ++L
Sbjct: 45 IDYNRIIGVLIRTSHFDLAEGYYNEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLND 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G++P+ ++ LC VD+A R M EKG PDV+ Y ++I+GLC+ R
Sbjct: 105 MDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGR 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
A++++ M +GL D K ++ L + LA ++ + + +
Sbjct: 165 FDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNT 224
Query: 588 LINAMHR 608
LIN R
Sbjct: 225 LINGFCR 231
Score = 68.2 bits (165), Expect = 3e-09
Identities = 46/180 (25%), Positives = 75/180 (41%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
Y T IS + A Q+F +M + + + +I + +A M
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+G + + + I LCK + D+ DM GI+P+ YN+ +N LC + V
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
AL+L M +G D V+Y ++I L R A W M+ KG D ++L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 250 bits (638), Expect = 4e-64
Identities = 126/207 (60%), Positives = 155/207 (74%), Gaps = 2/207 (0%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L+ + M KGL DVVSYNTII C DT AY+LF+EMG+KG+ PDVVTFTI I AFL
Sbjct: 312 LMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFL 371
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
+GS +A+K+L MT+MGL PDC+ TTIIDHLCK+ KV+MA S F DMVE+GI PDVI
Sbjct: 372 GKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVI 431
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+N +ING CK SRVSEA+ L+ MQ+RG DEVTYKLIIG LI E + +AC W QM
Sbjct: 432 SFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQM 491
Query: 546 MEKGYTLDRAVSQSLI--NAMHRRSTS 620
M+KG+TLDRA++Q+LI N++ STS
Sbjct: 492 MDKGFTLDRAIAQTLIRGNSIENASTS 518
Score = 95.1 bits (235), Expect = 2e-17
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Frame = +3
Query: 6 LLLDIMETKGL-LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAF 182
L++D+M++ + L + YN +ISG C + +A + M R G PD+VT+ + ++ F
Sbjct: 206 LIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYF 265
Query: 183 LMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDV 362
E A+K+L M + G+ PD ++ +CK D A+ + + + DV
Sbjct: 266 CDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDV 325
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
+ YN II CK + A +LF M +G+ D VT+ + I A + + + +A + DQ
Sbjct: 326 VSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQ 385
Query: 543 MMEKGYTLD 569
M E G + D
Sbjct: 386 MTEMGLSPD 394
Score = 81.3 bits (199), Expect = 3e-13
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Frame = +3
Query: 21 METKGL-LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGS 197
M T+G L +Y+ I+GLC ++ +L +M +PD+ F I + +EG
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 198 TIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNV 377
+A ++ + + G PD V T II +CK +K D A F+RDM+ KG PD
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 378 IINGLCKSSRVSEALQLFGN-MQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
I+ GLC +V A +L + M+S + + Y +I R + A M
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249
Query: 555 GYTLDRAVSQSLIN 596
G D +N
Sbjct: 250 GCEPDLVTYNVFLN 263
Score = 72.4 bits (176), Expect = 2e-10
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 2/189 (1%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL MET L D+ ++N + L A ++F+++ + G PDVVT+TI+I
Sbjct: 101 LLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVC 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
A + M G PD I+ LC KVD+A+ D+++ G +
Sbjct: 161 KIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLST 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G C++ R+ +A + M+ G D VTY + + E L A +
Sbjct: 221 LVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL 280
Query: 543 MMEKGYTLD 569
M G D
Sbjct: 281 MERSGIEPD 289
Score = 64.3 bits (155), Expect = 4e-08
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L + A + +MG +G T++ I + ++L
Sbjct: 45 IDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHD 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M + LPD + L ++D+A F +V+ G PDV+ Y +II+G+CK +
Sbjct: 105 METLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKK 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKG-YTLDRAVSQ 584
A+Q + +M +G D I+ L + LA +M+ G L V
Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYN 224
Query: 585 SLINAMHR 608
+LI+ R
Sbjct: 225 ALISGFCR 232
Score = 61.6 bits (148), Expect = 3e-07
Identities = 40/180 (22%), Positives = 72/180 (40%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
Y + I+G + +A Q+F EM + + + I + +A M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
G + I LCK + DM +PD+ +N+ ++ L R+
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
AL++F + G D VTY +II + + A +FW M+ KG++ D +++
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191
>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 248 bits (634), Expect = 1e-63
Identities = 118/202 (58%), Positives = 153/202 (75%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
+L++ M+TKG+ DVVSYNT+I+ C R TRR Y+LF+EM KG+ PD+VTF ILIDAFL
Sbjct: 314 MLVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFL 373
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EGS V +K+L MT++G+LPD + T ++DHLCK KVD A S FRDMVE G+ PDVI
Sbjct: 374 REGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVI 433
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN ++NG CK+SRV +A++L+ MQ GL DEVT+KLI+G LIR L LACR WDQM
Sbjct: 434 SYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLACRVWDQM 493
Query: 546 MEKGYTLDRAVSQSLINAMHRR 611
MEKG TLD+ +S++L+NA+ R
Sbjct: 494 MEKGLTLDKHLSETLVNAIQSR 515
Score = 99.0 bits (245), Expect = 2e-18
Identities = 56/188 (29%), Positives = 94/188 (50%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LLLD+ + D+ ++NT +S LC A +LF M +G PDVV++TI++DA
Sbjct: 104 LLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALC 163
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
A ++ +T GL PD ++ LC +VD+A+ +++ G+ +++
Sbjct: 164 KAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNIL 223
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +I+G C+ RV +A+++ M G D VTY ++ E L A R + M
Sbjct: 224 VYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETM 283
Query: 546 MEKGYTLD 569
G D
Sbjct: 284 ERSGVEPD 291
Score = 97.1 bits (240), Expect = 6e-18
Identities = 53/197 (26%), Positives = 99/197 (50%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++ +++ ++++ YN +I G C +A ++ M R G VPD+VT+ L++
Sbjct: 209 LVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCC 268
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EG A +++ M + G+ PD ++ CK VD A+ + ++ M DV+
Sbjct: 269 DEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVV 328
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I CK R +LF M +G+ D VT+ ++I A +RE ++ + + D+M
Sbjct: 329 SYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEM 388
Query: 546 MEKGYTLDRAVSQSLIN 596
G DR ++++
Sbjct: 389 TRLGILPDRIFYTAVVD 405
Score = 88.2 bits (217), Expect = 3e-15
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Frame = +3
Query: 63 IISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMTQMG 242
++ GLC AY+L + + GV +++ + LID F G A KI M++ G
Sbjct: 193 LVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNG 252
Query: 243 LLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA- 419
+PD V T++++ C +D A M G+ PD YN ++ CK++ V A
Sbjct: 253 CVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAY 312
Query: 420 LQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINA 599
L L MQ++G+C D V+Y +I A + +++M KG D LI+A
Sbjct: 313 LMLVERMQTKGMC-DVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDA 371
Query: 600 MHRRST 617
R +
Sbjct: 372 FLREGS 377
Score = 62.8 bits (151), Expect = 1e-07
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPD-----VVTFTILIDAFLMEGSTI-VA 209
V YN I L A+ + R+ V+P T++ I A + + +
Sbjct: 46 VDYNRFIGVLLRHSRLHLAHHYY----RRHVIPRGFSLLPFTYSRFISALCSAPNNLPLI 101
Query: 210 RKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIING 389
+L M +G +PD T + LC++ +++ A F M +G PDV+ Y +I++
Sbjct: 102 HDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDA 161
Query: 390 LCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLD 569
LCK+ R EA +++ + +GL D ++ L + LA +++ G ++
Sbjct: 162 LCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVN 221
Query: 570 RAVSQSLINAMHR 608
V +LI+ R
Sbjct: 222 ILVYNALIDGFCR 234
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 248 bits (634), Expect = 1e-63
Identities = 121/204 (59%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
Frame = +3
Query: 3 YLLL-DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDA 179
YL + ++ME KGL +VVS+NTII C TRRAY+LFQEM +KG++PDVVTFTILI A
Sbjct: 310 YLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTILIGA 369
Query: 180 FLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPD 359
FL EGS+ VA+K+L MT M LLPD + TTIIDHLCK+ K+ MA F DM+EKGI D
Sbjct: 370 FLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITAD 429
Query: 360 VIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWD 539
V++YN +I+GLC++SRV+EA+ L+ MQ+RG DEVTYK++IG LI++ L +AC WD
Sbjct: 430 VVLYNALISGLCRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACGVWD 489
Query: 540 QMMEKGYTLDRAVSQSLINAMHRR 611
+MMEKG+TLDR +S++LINA+H +
Sbjct: 490 EMMEKGFTLDRVLSETLINAVHSK 513
Score = 87.4 bits (215), Expect = 5e-15
Identities = 54/188 (28%), Positives = 92/188 (48%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL D+ + D+ ++N ++ LC A ++F M KG PDVV++TI+I
Sbjct: 102 LLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLC 161
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G A +I M G PD + T ++ LC KVD+A+ ++ G+ + +
Sbjct: 162 KAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNL 221
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +I+G C++ R+ +A + M+ G D VT+ +++ E L A + QM
Sbjct: 222 IYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQM 281
Query: 546 MEKGYTLD 569
+ G LD
Sbjct: 282 EKIGMKLD 289
Score = 81.3 bits (199), Expect = 3e-13
Identities = 51/182 (28%), Positives = 76/182 (41%)
Frame = +3
Query: 51 SYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHM 230
+Y+ ISGLC+ + +L ++M R G VPD+ F I ++ E A ++ M
Sbjct: 82 TYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRM 141
Query: 231 TQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRV 410
G PD V T +I LCK + D A + M+ KG PD I ++ GLC +V
Sbjct: 142 ADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKV 201
Query: 411 SEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSL 590
A L G+ + + Y +I R + A M G D L
Sbjct: 202 DLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVL 261
Query: 591 IN 596
+N
Sbjct: 262 LN 263
Score = 75.9 bits (185), Expect = 1e-11
Identities = 47/187 (25%), Positives = 82/187 (43%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
V YN I L A + EM +G T++ I + + K+L
Sbjct: 46 VDYNRFIGVLVKHSRYDLAEHYYYEMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRD 105
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G +PD ++ LC+ ++ A F M +KG PDV+ Y ++I+GLCK+ R
Sbjct: 106 MDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGR 165
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
A++++ M S+G D + ++ L + LA M+ G + + +
Sbjct: 166 FDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNA 225
Query: 588 LINAMHR 608
LI+ R
Sbjct: 226 LISGFCR 232
Score = 75.1 bits (183), Expect = 2e-11
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
+ D M KG DVVSY +I GLC + A +++ M KG PD + T L+
Sbjct: 137 VFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLC 196
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G +A ++ + G+ + ++ +I C+ ++D A + M G PD++
Sbjct: 197 GGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLV 256
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+NV++N C + EA +L M+ G+ D +Y + L ++N A F M
Sbjct: 257 THNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNM 316
Query: 546 ME 551
ME
Sbjct: 317 ME 318
Score = 72.0 bits (175), Expect = 2e-10
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKIL 221
D ++ ++ GLC AY L + GV + + + LI F A+ I
Sbjct: 184 DTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIK 243
Query: 222 GHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKS 401
M + G PD V ++++ C ++ A R M + G+ D YN + GLCK
Sbjct: 244 LFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKD 303
Query: 402 SRVSEALQLFGN-MQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAV 578
+R +A N M+ +GLC + V++ II A + A + + +M +KG D
Sbjct: 304 NRPEKAYLFMKNMMEPKGLC-NVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVT 362
Query: 579 SQSLINAMHRRSTSE 623
LI A R +S+
Sbjct: 363 FTILIGAFLREGSSD 377
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 248 bits (632), Expect = 2e-63
Identities = 122/200 (61%), Positives = 161/200 (80%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++D METKGL+DVVSYNTII LC + +++AY LF+EM +K ++PDVVTFTILI+A L
Sbjct: 311 LMVDKMETKGLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASL 370
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EG++ VA+ ++ MT MGL PD VL T+IID+LCK K+ +A S FRDMVE+G+ PDVI
Sbjct: 371 KEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVI 430
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I+G CK+SRV+EAL L+ +MQ+RGL DE+T+KLIIG LI+ NL +AC WDQM
Sbjct: 431 SYNALISGFCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVACAIWDQM 490
Query: 546 MEKGYTLDRAVSQSLINAMH 605
MEKG+TLDR +SQ+LINA++
Sbjct: 491 MEKGFTLDRDLSQTLINAIN 510
Score = 100 bits (249), Expect = 6e-19
Identities = 60/197 (30%), Positives = 99/197 (50%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L L I+ + + YNT+I+G C + +A + M R G PD+VT+ + ++
Sbjct: 206 LTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCC 265
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
E A K++ M +GL PD ++ CK ++D A+ D +E + DV+
Sbjct: 266 NELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVV 325
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN II LCK+ + +A LF M+ + + D VT+ ++I A ++E N +A DQM
Sbjct: 326 SYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQM 385
Query: 546 MEKGYTLDRAVSQSLIN 596
G DR + S+I+
Sbjct: 386 TSMGLFPDRVLYTSIID 402
Score = 79.0 bits (193), Expect = 2e-12
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL+ M+ G++ + +YN ++ LC A +L + MG KG PDVV++TI+I
Sbjct: 101 LLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLC 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G A ++ M + GL PD ++ LC + KVD+A+ ++ + +
Sbjct: 161 RIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTE 220
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +ING C++ R+ +A + M+ G D VTY + + E L A + ++M
Sbjct: 221 IYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKM 280
Score = 78.6 bits (192), Expect = 2e-12
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L+ +M KG DVVSY +ISGLC A +++ M RKG+ PD L+
Sbjct: 136 LIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLC 195
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G +A ++ + + + + + T+I+ C+ ++D A + M G PD++
Sbjct: 196 GSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLV 255
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YNV +N C + EA++L M+ GL D +Y ++ + N L A +
Sbjct: 256 TYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDK 315
Query: 546 MEKGYTLDRAVSQSLINAMHRRSTSE 623
ME +D ++I A+ + S+
Sbjct: 316 METKGLVDVVSYNTIIRALCKTDQSK 341
Score = 72.0 bits (175), Expect = 2e-10
Identities = 47/187 (25%), Positives = 84/187 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN II L + A + EM G + +T++ I + + ++L
Sbjct: 45 IDYNRIIGVLIRTSHFDLAEGYYNEMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLND 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G++P+ ++ LC VD+A R M EKG PDV+ Y ++I+GLC+ R
Sbjct: 105 MDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGR 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
A++++ M +GL D K ++ L + LA ++ + + +
Sbjct: 165 FDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNT 224
Query: 588 LINAMHR 608
LIN R
Sbjct: 225 LINGFCR 231
Score = 69.7 bits (169), Expect = 1e-09
Identities = 47/180 (26%), Positives = 75/180 (41%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
Y T IS + A Q+F EM + + + +I + +A M
Sbjct: 12 YRTRISSYVKTGLVNEALQVFDEMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+G + + + I LCK + D+ DM GI+P+ YN+ +N LC + V
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLI 593
AL+L M +G D V+Y ++I L R A W M+ KG D ++L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 248 bits (632), Expect = 2e-63
Identities = 124/194 (63%), Positives = 145/194 (74%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
M KG DVVSYNTII C + RRAY+LF+EMGRKG+ PDVVTFTILI AFL EG++
Sbjct: 317 MVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNS 376
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
+A+K+L M MGLLPD + TTIIDH CK+ KV+MA S F DMVEKGI PDV+ YN +
Sbjct: 377 DMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNAL 436
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
ING CKS RV E + L+ M RG DEVTYKLIIGAL+REN L ACR WDQMME+G
Sbjct: 437 INGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGL 496
Query: 561 TLDRAVSQSLINAM 602
TLDR +S+ LINA+
Sbjct: 497 TLDRGISEMLINAI 510
Score = 88.6 bits (218), Expect = 2e-15
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 36/192 (18%)
Frame = +3
Query: 39 LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKI 218
L +Y+ ISGLC +++ L ++M + VPD+ F I ++ E A ++
Sbjct: 77 LSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEV 136
Query: 219 LGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPD------------- 359
G M + G PD V T IID LCK +K D A F+ +M++KGI PD
Sbjct: 137 FGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCD 196
Query: 360 -----------------------VIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEV 470
++YN +I+G C++ R+ +AL + M G D V
Sbjct: 197 GGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLV 256
Query: 471 TYKLIIGALIRE 506
TY +++ E
Sbjct: 257 TYNVLLNYCCNE 268
Score = 66.6 bits (161), Expect = 9e-09
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKIL 221
DVV++ II GLC + A Q + M KG+ PD L G +A +++
Sbjct: 148 DVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELI 207
Query: 222 GHMTQMGLLP-DCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCK 398
+ GL ++ +I C+ ++D A + M G PD++ YNV++N C
Sbjct: 208 IGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCN 267
Query: 399 SSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFW-DQMMEKGY 560
EA++L M+ + D +Y ++ A + N+ A F +M+ KG+
Sbjct: 268 EFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF 322
Score = 65.1 bits (157), Expect = 3e-08
Identities = 43/179 (24%), Positives = 75/179 (41%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
Y T I+ + A ++F EM + + I + +A M
Sbjct: 12 YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+G + I LC+ ++ + +DM + +PD+ +N+ +N L + +R
Sbjct: 72 PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSL 590
AL++FG M RG D VT+ +II L + A +FW M++KG D +L
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVAL 190
Score = 58.5 bits (140), Expect = 2e-06
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L A+ + +M G T++ I +L
Sbjct: 45 IDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKD 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++ +PD ++ L + + + A F MVE+G PDV+ + +II+GLCK +
Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164
Query: 408 VSEALQLFGNMQSRGLCAD-----------------EVTYKLIIGAL 497
A+Q + NM +G+ D ++ Y+LIIG +
Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVI 211
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 244 bits (623), Expect = 2e-62
Identities = 114/197 (57%), Positives = 149/197 (75%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
M+TKG+ DVVSYNTII+ C +R R Y+LF+EM RKG+ PDV+TFT+LI+AF EG +
Sbjct: 317 MQTKGMCDVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGS 376
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
VA+K+L MT MG++PD + TTI+D LCK KVD+A F DMVE G+ PDV+ YN +
Sbjct: 377 DVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNAL 436
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
ING CK+SRV +A+ L+ MQ +GL D VT+KLI+G LIREN + AC+ WDQMMEKG+
Sbjct: 437 INGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEACKVWDQMMEKGF 496
Query: 561 TLDRAVSQSLINAMHRR 611
TLDR +S++L+NAM R
Sbjct: 497 TLDRRLSETLVNAMKSR 513
Score = 93.6 bits (231), Expect = 7e-17
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++ ++ ++ + YN +ISG C +A + M R G VPD+VT+ IL++
Sbjct: 207 LIVGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCC 266
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAF-SFFRDMVEKGIMPDV 362
E K++ M + G+ PD ++ CK +VD A+ + + M KG M DV
Sbjct: 267 DEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKG-MCDV 325
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
+ YN II CK+ R+ +LF M+ +G+ D +T+ ++I A +E +A + DQ
Sbjct: 326 VSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQ 385
Query: 543 MMEKGYTLDRAVSQSLINAM 602
M G D ++++ +
Sbjct: 386 MTTMGIVPDLIFYTTIVDRL 405
Score = 91.7 bits (226), Expect = 3e-16
Identities = 51/189 (26%), Positives = 90/189 (47%)
Frame = +3
Query: 3 YLLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAF 182
YLL D+ + D+ ++N ++ LC A QLF+ M KG PDVV++ I+++A
Sbjct: 101 YLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNAL 160
Query: 183 LMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDV 362
++ + + GL PD + ++ LC VD+A+ ++ G+ +
Sbjct: 161 CKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNC 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G C+ R+ +AL + G M G D VTY +++ E L + +
Sbjct: 221 LVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVES 280
Query: 543 MMEKGYTLD 569
M G D
Sbjct: 281 MERSGVEPD 289
Score = 81.3 bits (199), Expect = 3e-13
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKIL 221
DVVSYN I++ LC ++ ++++ + KG+ PD L+ G+ +A +++
Sbjct: 149 DVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELI 208
Query: 222 GHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIIN----- 386
+ G+ +C++ +I C+ ++D A + M G +PD++ YN+++N
Sbjct: 209 VGVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDE 268
Query: 387 ------------------------------GLCKSSRVSEA-LQLFGNMQSRGLCADEVT 473
G CK+++V A L + MQ++G+C D V+
Sbjct: 269 VMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMC-DVVS 327
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHRRSTSE 623
Y II A + + +++M KG D LI A + S+
Sbjct: 328 YNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSD 377
Score = 69.7 bits (169), Expect = 1e-09
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Frame = +3
Query: 111 LFQEMGRKGVVPD-----VVTFTILIDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTI 275
L Q R+ V+P+ T++ I A + + +L M +G +PD
Sbjct: 62 LAQSYYRRHVIPNGFSLTPFTYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIY 121
Query: 276 IDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEALQLFGNMQSRGL 455
++ LC+ +++ A FR M KG PDV+ YN+I+N LCK+ RV E +++ ++ +GL
Sbjct: 122 LNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGL 181
Query: 456 CADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHR 608
D ++ L N+ LA ++ G ++ V +LI+ R
Sbjct: 182 KPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISGFCR 232
Score = 57.0 bits (136), Expect = 7e-06
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
D++E DVVSYN +I+G C + A L+ EM KG+ PD VTF +++ + E
Sbjct: 420 DMVENGVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIREN 479
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIID 281
A K+ M + G D LS T+++
Sbjct: 480 KISEACKVWDQMMEKGFTLDRRLSETLVN 508
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 241 bits (614), Expect = 3e-61
Identities = 120/195 (61%), Positives = 145/195 (74%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
ME KGL D VSYNT+I C TRRAY+LF+EM R+G+ DVVTFTILI AFL EGS+
Sbjct: 316 MEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSS 375
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
+A K+L M M L PD +L TTIID LCK+ ++ A+ F DMVE+GI PDVI YN +
Sbjct: 376 AMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNAL 435
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
INGLCKSSRVSEA+ L+ MQ RG DEVT+KL+IG L++E L LACR WDQMMEKG+
Sbjct: 436 INGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 495
Query: 561 TLDRAVSQSLINAMH 605
TLD+ VS +LI A+H
Sbjct: 496 TLDKTVSAALIEAIH 510
Score = 99.8 bits (247), Expect = 9e-19
Identities = 57/199 (28%), Positives = 100/199 (50%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L + M+ K V+ YN +ISG C + RA + M R G PD+VT+ +++ +
Sbjct: 206 LTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYC 265
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
E A K++ M G+ PD ++ LC + ++D A+ F +E + D +
Sbjct: 266 DEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKV 325
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I CK + A +LF M+ RG+ D VT+ ++I A +RE + +A + +QM
Sbjct: 326 SYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQM 385
Query: 546 MEKGYTLDRAVSQSLINAM 602
+ DR + ++I+ +
Sbjct: 386 RGMNLSPDRILYTTIIDCL 404
Score = 84.0 bits (206), Expect = 5e-14
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPD------------------------ 149
D V+Y +I GLC ++ +A Q ++ M G+ PD
Sbjct: 148 DFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELT 207
Query: 150 -----------VVTFTILIDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKN 296
V+ + LI F G A I M + G PD V I+++ C
Sbjct: 208 VGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDE 267
Query: 297 EKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA-LQLFGNMQSRGLCADEVT 473
+D A +M GI PDV YN ++ GLC S+++ +A + + M+++GL D+V+
Sbjct: 268 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVS 326
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHRRSTS 620
Y +I A + A + +++M +G LD LI A R +S
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSS 375
Score = 80.5 bits (197), Expect = 6e-13
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 35/181 (19%)
Frame = +3
Query: 51 SYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHM 230
+Y+ ISGLC+ ++ L M + G +PD+ F I ++ E +A ++ M
Sbjct: 81 TYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKM 140
Query: 231 TQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPD----------------- 359
G PD V T +ID LCK +K D A + M+E GI PD
Sbjct: 141 VSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV 200
Query: 360 ------------------VIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLI 485
V++YN +I+G C++ R+ A+ + M+ G D VTY I
Sbjct: 201 DLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAI 260
Query: 486 I 488
+
Sbjct: 261 L 261
Score = 64.3 bits (155), Expect = 4e-08
Identities = 39/159 (24%), Positives = 70/159 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L +Q+M G T++ I + + +L +
Sbjct: 45 IDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDN 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G LPD ++ L ++D+A F MV KG PD + Y ++I+GLCK+ +
Sbjct: 105 MDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKK 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLA 524
+A+Q + +M G+ D ++ L + + LA
Sbjct: 165 FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 203
Score = 60.1 bits (144), Expect = 8e-07
Identities = 32/92 (34%), Positives = 50/92 (54%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
+ LD++E DV+SYN +I+GLC S A L++EM +G PD VTF +LI +
Sbjct: 416 VFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLV 475
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIID 281
E +A ++ M + G D +S +I+
Sbjct: 476 QEKKLELACRLWDQMMEKGFTLDKTVSAALIE 507
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 241 bits (614), Expect = 3e-61
Identities = 120/195 (61%), Positives = 145/195 (74%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
ME KGL D VSYNT+I C TRRAY+LF+EM R+G+ DVVTFTILI AFL EGS+
Sbjct: 316 MEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSS 375
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
+A K+L M M L PD +L TTIID LCK+ ++ A+ F DMVE+GI PDVI YN +
Sbjct: 376 AMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNAL 435
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
INGLCKSSRVSEA+ L+ MQ RG DEVT+KL+IG L++E L LACR WDQMMEKG+
Sbjct: 436 INGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGF 495
Query: 561 TLDRAVSQSLINAMH 605
TLD+ VS +LI A+H
Sbjct: 496 TLDKTVSAALIEAIH 510
Score = 102 bits (253), Expect = 2e-19
Identities = 57/194 (29%), Positives = 99/194 (51%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
M+ K V+ YN +ISG C + RRA + M R G PD+VT+ +++ + E
Sbjct: 211 MKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVML 270
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
A K++ M G+ PD ++ LC + ++D A+ F +E + D + YN +
Sbjct: 271 DEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTV 330
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
I CK + A +LF M+ RG+ D VT+ ++I A +RE + +A + +QM
Sbjct: 331 IEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNL 390
Query: 561 TLDRAVSQSLINAM 602
+ DR + ++I+ +
Sbjct: 391 SPDRILYTTIIDCL 404
Score = 83.2 bits (204), Expect = 9e-14
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPD------------------------ 149
D V+Y +I GLC ++ +A Q ++ M G+ PD
Sbjct: 148 DFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERT 207
Query: 150 -----------VVTFTILIDAFLMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKN 296
V+ + LI F G A I M + G PD V I+++ C
Sbjct: 208 VGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDE 267
Query: 297 EKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA-LQLFGNMQSRGLCADEVT 473
+D A +M GI PDV YN ++ GLC S+++ +A + + M+++GL D+V+
Sbjct: 268 VMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL-RDKVS 326
Query: 474 YKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLINAMHRRSTS 620
Y +I A + A + +++M +G LD LI A R +S
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSS 375
Score = 80.5 bits (197), Expect = 6e-13
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 35/181 (19%)
Frame = +3
Query: 51 SYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHM 230
+Y+ ISGLC+ ++ L M + G +PD+ F I ++ E +A ++ M
Sbjct: 81 TYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKM 140
Query: 231 TQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPD----------------- 359
G PD V T +ID LCK +K D A + M+E GI PD
Sbjct: 141 VSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKV 200
Query: 360 ------------------VIMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLI 485
V++YN +I+G C++ R+ A+ + M+ G D VTY I
Sbjct: 201 DLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAI 260
Query: 486 I 488
+
Sbjct: 261 L 261
Score = 64.3 bits (155), Expect = 4e-08
Identities = 39/159 (24%), Positives = 70/159 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
+ YN I L +Q+M G T++ I + + +L +
Sbjct: 45 IDYNRFIGVLIRHSRFDLVQFYYQQMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDN 104
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M ++G LPD ++ L ++D+A F MV KG PD + Y ++I+GLCK+ +
Sbjct: 105 MDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKK 164
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLA 524
+A+Q + +M G+ D ++ L + + LA
Sbjct: 165 FDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLA 203
Score = 60.1 bits (144), Expect = 8e-07
Identities = 32/92 (34%), Positives = 50/92 (54%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
+ LD++E DV+SYN +I+GLC S A L++EM +G PD VTF +LI +
Sbjct: 416 VFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGGLV 475
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIID 281
E +A ++ M + G D +S +I+
Sbjct: 476 QEKKLELACRLWDQMMEKGFTLDKTVSAALIE 507
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 238 bits (607), Expect = 2e-60
Identities = 116/203 (57%), Positives = 150/203 (73%)
Frame = +3
Query: 3 YLLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAF 182
Y L++ M KGL D VSYNT+I LC S TR+AY+LF+EMG+K V PDV TF LI AF
Sbjct: 309 YKLMNTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAF 368
Query: 183 LMEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDV 362
L+EGS +A+ +L MTQ L+PD + TT++D+ CK K++MA FRDM+E GI PDV
Sbjct: 369 LIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDV 428
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
+ YN +INGLCK+S+VSEA+ L+ MQ RG DEVT+KLIIG L+R+ L LAC+ WDQ
Sbjct: 429 VSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQ 488
Query: 543 MMEKGYTLDRAVSQSLINAMHRR 611
MMEKGYTLD+ +S++LI A+ R
Sbjct: 489 MMEKGYTLDKFLSETLIKAIRSR 511
Score = 88.2 bits (217), Expect = 3e-15
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Frame = +3
Query: 21 METKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGS 197
M KGL D+ + ++ GLCD AY+L + + + + F L+ F G
Sbjct: 175 MVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGR 234
Query: 198 TIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNV 377
A I M++ G PD + +++ C +++A + M G+ PDV YN
Sbjct: 235 ISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQ 294
Query: 378 IINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKG 557
++ GLCK++R+ +A +L M +GLC D V+Y +IGAL + A R +++M +K
Sbjct: 295 LLKGLCKANRLDKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKD 353
Query: 558 YTLDRAVSQSLINA 599
D +LI A
Sbjct: 354 VAPDVGTFATLIKA 367
Score = 85.5 bits (210), Expect = 2e-14
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Frame = +3
Query: 51 SYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHM 230
+Y+ IS LC+ ++ +L ++M + G +PD+ F I ++ E +A K M
Sbjct: 81 TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEM 140
Query: 231 TQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDV---------------- 362
G PD V T I+D LCK ++ D A F+R MV KG+ PD+
Sbjct: 141 VAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200
Query: 363 -------------------IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLI 485
+++N +++G CKS R+S+AL + M G D +TY ++
Sbjct: 201 DLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNIL 260
Query: 486 IGALIRENNLPLACRFWDQMMEKGYTLD 569
+ L LA + +M G D
Sbjct: 261 LNFFCDGLMLELAGKSMKKMERIGMEPD 288
Score = 62.4 bits (150), Expect = 2e-07
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN I L A + M +G T++ I A + + ++L M
Sbjct: 47 YNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMK 106
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
Q+G LPD ++ L + +++A FF +MV KG PDV+ Y +I++ LCK+ +
Sbjct: 107 QLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYD 166
Query: 414 EALQLFGNMQSRGLCAD-EVTYKLIIG 491
+A++ + M ++GL D + L++G
Sbjct: 167 KAVEFWRCMVNKGLSPDMKACTALVVG 193
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 229 bits (584), Expect = 8e-58
Identities = 110/198 (55%), Positives = 149/198 (75%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L++ ME +G DVVSY+T+I C + +TR+AY+LF+EM +KG+V +VVT+T LI AFL
Sbjct: 312 LMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFL 371
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EG++ VA+K+L MT++GL PD + TTI+DHLCK+ VD A+ F DM+E GI PD I
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAI 431
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I+GLC+S RV+EA++LF +MQS+ C DE+T+K IIG LIRE L A + WDQM
Sbjct: 432 SYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYKVWDQM 491
Query: 546 MEKGYTLDRAVSQSLINA 599
M+KG+TLDR VS +LI A
Sbjct: 492 MDKGFTLDRDVSDTLIKA 509
Score = 98.2 bits (243), Expect = 3e-18
Identities = 54/194 (27%), Positives = 95/194 (48%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
+I + L V YN +ISG C + +A L M + G PD+VT+ +L++ +
Sbjct: 210 EIKSARVKLSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHN 269
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYN 374
A ++ M + G+ PD ++ C+ D +S +E DV+ Y+
Sbjct: 270 MLKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVVSYS 329
Query: 375 VIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
+I C++S +A +LF M+ +G+ + VTY +I A +RE N +A + DQM E
Sbjct: 330 TLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 555 GYTLDRAVSQSLIN 596
G + DR ++++
Sbjct: 390 GLSPDRIFYTTILD 403
Score = 90.9 bits (224), Expect = 4e-16
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL MET G + D+ ++N + LC R+ A Q F M R+G PDVV++TILI+
Sbjct: 101 LLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLF 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
G A + M + G+ PD +++ LC KVD+A+ + ++ +
Sbjct: 161 RAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLST 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G C++ R+ +A L M G D VTY +++ N L A +
Sbjct: 221 VVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSE 280
Query: 543 MMEKGYTLD 569
M+ G D
Sbjct: 281 MVRSGIQPD 289
Score = 77.4 bits (189), Expect = 5e-12
Identities = 51/182 (28%), Positives = 80/182 (43%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
++Y + I+ L S A Q+F E+ + I + E +A +
Sbjct: 10 LAYRSRIAYLVKSGMIDNAVQVFDELRHSSFRVFSSDYNRFIGVLVKESRFELAEALYRD 69
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
MT MG + I LCK K D+ + RDM G +PD+ +N+ ++ LC+
Sbjct: 70 MTPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDLLCRERE 129
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
V A+Q F M RG D V+Y ++I L R + A FW++M+ G D S
Sbjct: 130 VGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPDNKACAS 189
Query: 588 LI 593
L+
Sbjct: 190 LV 191
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 223 bits (567), Expect = 7e-56
Identities = 107/197 (54%), Positives = 146/197 (74%)
Frame = +3
Query: 9 LLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLM 188
+L ME +G DVVSY+T+I C + +T++AY+LF+EM +KG+V +VVTFT LI AFL
Sbjct: 313 MLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLR 372
Query: 189 EGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIM 368
EG++ VA+K+L MT++GL PD + TTI+DHLCK+ VD A+ F DM+E I PD I
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAIS 432
Query: 369 YNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMM 548
YN +I+GLC+S RV+EA++LF +M+ + C DE+T+K IIG LIRE L A + WDQMM
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMM 492
Query: 549 EKGYTLDRAVSQSLINA 599
+KG+TLDR VS +LI A
Sbjct: 493 DKGFTLDRDVSDTLIKA 509
Score = 96.3 bits (238), Expect = 1e-17
Identities = 53/194 (27%), Positives = 96/194 (49%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
+I + L +V YN +ISG C + +A L M + G PD+VT+ +L++ +
Sbjct: 210 EIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYN 374
A ++ M + G+ D ++ C+ D +SF +E DV+ Y+
Sbjct: 270 MLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYS 329
Query: 375 VIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
+I C++S +A +LF M+ +G+ + VT+ +I A +RE N +A + DQM E
Sbjct: 330 TLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 555 GYTLDRAVSQSLIN 596
G + DR ++++
Sbjct: 390 GLSPDRIFYTTILD 403
Score = 89.7 bits (221), Expect = 1e-15
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL MET G + D+ ++N + LC A Q F M ++G PDVV++TILI+
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
G A +I M + G+ PD ++ LC KVD+A+ + ++ + +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSI 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G CK+ R+ +A L M G D VTY +++ N L A +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTE 280
Query: 543 MMEKGYTLD 569
M+ G LD
Sbjct: 281 MVRSGIQLD 289
Score = 75.9 bits (185), Expect = 1e-11
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = +3
Query: 63 IISGLCDSRDTRRAYQLF-QEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMTQM 239
++ GLC +R AY++ +E+ V +V + LI F G A + M+++
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI 249
Query: 240 GLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA 419
G PD V ++++ N + A +MV GI D YN ++ C+ S
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRC 309
Query: 420 LQ-LFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLIN 596
+ M+ RG C D V+Y +I R +N A + +++M +KG + SLI
Sbjct: 310 YSFMLKEMEPRGFC-DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIK 368
Query: 597 AMHRRSTS 620
A R S
Sbjct: 369 AFLREGNS 376
Score = 75.1 bits (183), Expect = 2e-11
Identities = 49/182 (26%), Positives = 81/182 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
++Y + I+ L S A Q+F EM + I + E +A I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M MG + I LCK +K ++ + RDM G +PD+ +N+ ++ LC+ ++
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
V A+Q F M RG D V+Y ++I L R + A W+ M+ G + D +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 588 LI 593
L+
Sbjct: 190 LV 191
Score = 64.3 bits (155), Expect = 4e-08
Identities = 40/157 (25%), Positives = 70/157 (44%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN I L A ++++M G T++ I + +L M
Sbjct: 47 YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDME 106
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+G +PD +D LC+ KV A F MV++G PDV+ Y ++INGL ++ +V+
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLA 524
+A++++ M G+ D ++ L + LA
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Score = 61.2 bits (147), Expect = 4e-07
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LLD M GL D + Y TI+ LC S + +AY +F +M + PD +++ LI
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLC 441
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G A K+ M PD + II L + +K+ A+ + M++KG D
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 366 MYNVIINGLCKSS 404
+ + +I C S
Sbjct: 502 VSDTLIKASCSMS 514
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 219 bits (558), Expect = 8e-55
Identities = 105/193 (54%), Positives = 144/193 (74%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
ME +G DVVSY+T+I C + +TR+AY+LF+EM +KG+V +VVT+T LI AFL EG +
Sbjct: 317 MEPRGFCDVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKS 376
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
VA+K+L MT++GL PD + TTI++HLCK+ +D A+ F DM+E I PD I YN +
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSL 436
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
I GLC++ RV+EA++LF +MQS+ C DE+T+K IIG LIREN + A + WDQMM+KG+
Sbjct: 437 ICGLCRACRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGF 496
Query: 561 TLDRAVSQSLINA 599
TLDR VS +LI A
Sbjct: 497 TLDRDVSDTLIKA 509
Score = 91.7 bits (226), Expect = 3e-16
Identities = 53/194 (27%), Positives = 93/194 (47%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
+I + L V YN +ISG C + +A L M + PD+VT+ +L++ +
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENN 269
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYN 374
A ++ M + G+ D ++ C+ D +SF +E DV+ Y+
Sbjct: 270 LLKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYS 329
Query: 375 VIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
+I C++S +A +LF M+ +G+ + VTY +I A +RE +A + DQM E
Sbjct: 330 TLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTEL 389
Query: 555 GYTLDRAVSQSLIN 596
G + DR +++N
Sbjct: 390 GLSPDRIFYTTILN 403
Score = 86.7 bits (213), Expect = 8e-15
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL MET G + D+ ++N + LC A Q F M ++G PDVV++TILI+
Sbjct: 101 LLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
G A +I M + G+ PD ++ LC KVD+A+ + ++ +
Sbjct: 161 RAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G CK+ R+ +A L M D VTY +++ N L A +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTE 280
Query: 543 MMEKGYTLD 569
M+ G LD
Sbjct: 281 MVRSGVELD 289
Score = 76.3 bits (186), Expect = 1e-11
Identities = 50/182 (27%), Positives = 81/182 (44%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
++Y + I+ L S A Q+F EM + I + E +A I
Sbjct: 10 LAYRSRIAKLVKSGIIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYWD 69
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M MG + I LCK +K D+ + RDM G +PD+ +N+ ++ LC+ ++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
V A+Q F M RG D V+Y ++I L R + A W++M+ G D +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAA 189
Query: 588 LI 593
L+
Sbjct: 190 LV 191
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 218 bits (554), Expect = 2e-54
Identities = 105/193 (54%), Positives = 143/193 (74%)
Frame = +3
Query: 21 METKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGST 200
ME +G DVVSY+T+I C + +TR+AY+LF+EM +KG+V +VVT+T LI AFL EG++
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 201 IVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVI 380
VA+K+L MT++GL PD + TTI+DHLCK+ VD A+ F DM+E I PD I YN +
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 381 INGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGY 560
I+GLC+S RV+EA++LF +M+ + C DE+T+K IIG LIR L A + WDQMM+KG+
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 561 TLDRAVSQSLINA 599
TLDR VS +LI A
Sbjct: 497 TLDRDVSDTLIKA 509
Score = 95.5 bits (236), Expect = 2e-17
Identities = 53/194 (27%), Positives = 95/194 (48%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
+I + L V YN +ISG C + +A L M + G PD+VT+ +L++ +
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYN 374
A ++ M + G+ D ++ C+ D ++F +E DV+ Y+
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 375 VIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
+I C++S +A +LF M+ +G+ + VTY +I A +RE N +A + DQM E
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 555 GYTLDRAVSQSLIN 596
G + DR ++++
Sbjct: 390 GLSPDRIFYTTILD 403
Score = 89.7 bits (221), Expect = 1e-15
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL MET G + D+ ++N + LC A Q F M ++G PDVV++TILI+
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKG-IMPDV 362
G A +I M + G+ PD ++ LC KVD+A+ + ++ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 363 IMYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQ 542
++YN +I+G CK+ R+ +A L M G D VTY +++ N L A +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 543 MMEKGYTLD 569
M+ G LD
Sbjct: 281 MVRSGIQLD 289
Score = 77.8 bits (190), Expect = 4e-12
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Frame = +3
Query: 63 IISGLCDSRDTRRAYQLF-QEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMTQM 239
++ GLC +R AY++ +E+ V V + LI F G A + +M+++
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 240 GLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVSEA 419
G PD V ++++ N + A +MV GI D YN ++ C+ S +
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 420 LQ-LFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQSLIN 596
+ M+ RG C D V+Y +I R +N A R +++M +KG ++ SLI
Sbjct: 310 YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 597 AMHRRSTS 620
A R S
Sbjct: 369 AFLREGNS 376
Score = 75.1 bits (183), Expect = 2e-11
Identities = 50/182 (27%), Positives = 80/182 (43%)
Frame = +3
Query: 48 VSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGH 227
++Y + I+ L S A Q+F EM + I + E +A I
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 228 MTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSR 407
M MG + I LCK +K D+ + DM G +PD+ +NV ++ LC+ ++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 408 VSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAVSQS 587
V A+Q F M RG D V+Y ++I L R + A W+ M+ G + D +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 588 LI 593
L+
Sbjct: 190 LV 191
Score = 64.3 bits (155), Expect = 4e-08
Identities = 40/157 (25%), Positives = 69/157 (43%)
Frame = +3
Query: 54 YNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKILGHMT 233
YN I L A ++ +M G T++ I + +L M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 234 QMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKSSRVS 413
+G +PD +D LC+ KV A F MV++G PDV+ Y ++INGL ++ +V+
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 414 EALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLA 524
+A++++ M G+ D ++ L + LA
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Score = 60.8 bits (146), Expect = 5e-07
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 9 LLDIMETKGLL-DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LLD M GL D + Y TI+ LC S + +AY +F +M + PD +++ LI
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
G A K+ M PD + II L + +K+ A+ + M++KG D
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 366 MYNVIINGLCKSS 404
+ + +I C S
Sbjct: 502 VSDTLIKASCSMS 514
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 200 bits (508), Expect = 5e-49
Identities = 94/206 (45%), Positives = 140/206 (67%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL+D ME+K + DVVSYNTI+ LC R AY+L +EM KG+ PDVVT++ LI+ F
Sbjct: 474 LLVDKMESKEIFDVVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFF 533
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
EG +A ++ + +G +PD V TT+ DHLCK+ +V+ A S F +M++ G+ PD+I
Sbjct: 534 REGHIDLAEELFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMI 593
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
YN +I+GLCK+ VSEA++++ M G DEVTY L+IG L+R+ L +AC+ WDQM
Sbjct: 594 SYNALIDGLCKAFMVSEAVEVYEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQM 653
Query: 546 MEKGYTLDRAVSQSLINAMHRRSTSE 623
MEKG LD V ++L++++ ++ +E
Sbjct: 654 MEKGLVLDTVVGEALVDSVRMKNATE 679
Score = 95.5 bits (236), Expect = 2e-17
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Frame = +3
Query: 27 TKGL-LDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTI 203
T+G+ L YN +I+G C +A + M R G PD+VT+ +++ E
Sbjct: 375 TRGIALTTPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVF 434
Query: 204 VARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVII 383
A K++ M + G+ PD ++ C ++D A+ D +E + DV+ YN I+
Sbjct: 435 EAEKLIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIV 494
Query: 384 NGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYT 563
LC+ R A +L M +G+ D VTY +I RE ++ LA ++Q+++ G+
Sbjct: 495 GALCRVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFV 554
Query: 564 LD 569
D
Sbjct: 555 PD 556
Score = 89.4 bits (220), Expect = 1e-15
Identities = 54/189 (28%), Positives = 93/189 (49%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
LL DI + D+ +YN ++ LC A L ++M R+ + P+ VT+TI+I+
Sbjct: 265 LLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLLEDMTRR-IKPNPVTYTIIINGLC 323
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
+ A ++ M + G PD + T++ LCK+ KVD+A+ ++ +GI
Sbjct: 324 RKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTP 383
Query: 366 MYNVIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQM 545
+YN +ING C R+ +A + M+ G D VTY ++ EN + A + ++M
Sbjct: 384 VYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKM 443
Query: 546 MEKGYTLDR 572
G D+
Sbjct: 444 KRYGINPDK 452
Score = 88.6 bits (218), Expect = 2e-15
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Frame = +3
Query: 42 DVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEGSTIVARKIL 221
D+++ T++ GLC AY + + +G+ + LI+ F G A+ I+
Sbjct: 346 DLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCSIGRIDKAQAIV 405
Query: 222 GHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYNVIINGLCKS 401
M + G PD V T++++ C V A M GI PD YN+++ G C +
Sbjct: 406 AFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSYNILLKGYCNA 465
Query: 402 SRVSEA-LQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEKGYTLDRAV 578
+++ +A L L M+S+ + D V+Y I+GAL R A + ++M KG + D
Sbjct: 466 NQLDKAYLLLVDKMESKEI-FDVVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVT 524
Query: 579 SQSLINAMHR 608
SLIN R
Sbjct: 525 YSSLINGFFR 534
Score = 76.3 bits (186), Expect = 1e-11
Identities = 49/194 (25%), Positives = 90/194 (46%)
Frame = +3
Query: 15 DIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFLMEG 194
+++E+K ++ Y+ I L A + ++ M RKG T++ I
Sbjct: 198 EMLESKCVVFSRDYSRFIGVLIKYCQFDLAKKYYERMVRKGYPLTTFTYSRFISGLSDAN 257
Query: 195 STIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVIMYN 374
K+L + +MG PD ++ LC+ K+D+A + DM + I P+ + Y
Sbjct: 258 DLEYIEKLLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLLEDMTRR-IKPNPVTYT 316
Query: 375 VIINGLCKSSRVSEALQLFGNMQSRGLCADEVTYKLIIGALIRENNLPLACRFWDQMMEK 554
+IINGLC+ R AL+++ M +G D + ++ L + + + LA +++ +
Sbjct: 317 IIINGLCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITR 376
Query: 555 GYTLDRAVSQSLIN 596
G L V +LIN
Sbjct: 377 GIALTTPVYNALIN 390
Score = 66.2 bits (160), Expect = 1e-08
Identities = 39/140 (27%), Positives = 69/140 (49%)
Frame = +3
Query: 6 LLLDIMETKGLLDVVSYNTIISGLCDSRDTRRAYQLFQEMGRKGVVPDVVTFTILIDAFL 185
L I++ + DVV+Y T+ LC S +A LF M + GV PD++++ LID
Sbjct: 544 LFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLC 603
Query: 186 MEGSTIVARKILGHMTQMGLLPDCVLSTTIIDHLCKNEKVDMAFSFFRDMVEKGIMPDVI 365
A ++ M G PD V +I L ++EK+ MA + M+EKG++ D +
Sbjct: 604 KAFMVSEAVEVYEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVLDTV 663
Query: 366 MYNVIINGLCKSSRVSEALQ 425
+ +++ + + + +Q
Sbjct: 664 VGEALVDSVRMKNATEKTVQ 683