BLASTX nr result
ID: Rheum21_contig00021445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021445
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] gi|1... 312 3e-83
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 308 5e-82
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 308 5e-82
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 307 1e-81
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 306 2e-81
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 305 4e-81
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 303 1e-80
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 303 1e-80
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 303 1e-80
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 303 2e-80
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] gi... 279 2e-73
gb|ADE10202.1| viral replicase [Hydrangea ringspot virus] 248 6e-64
ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|5... 244 6e-63
ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|A... 233 2e-59
ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mo... 232 3e-59
gb|AFM77886.1| replicase [Hosta virus X] 223 3e-56
ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CA... 223 3e-56
ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X] g... 219 3e-55
gb|AAF67818.1|AF111193_1 replicase [Potato virus X] 219 4e-55
gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X] 219 4e-55
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
gi|1173174|sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA
replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase gi|311645|emb|CAA79761.1| 156K-protein
[Plantago asiatica mosaic virus]
Length = 1385
Score = 312 bits (799), Expect = 3e-83
Identities = 148/149 (99%), Positives = 149/149 (100%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1127 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 1186
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1187 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFDI 1246
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSFALLK
Sbjct: 1247 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 1275
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 308 bits (789), Expect = 5e-82
Identities = 146/149 (97%), Positives = 148/149 (99%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDALSPNNIMINCEKTPQDLSRWVL+YWDFSKP+YANDFTAFDQSQDGAMLQFE
Sbjct: 1110 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLSYWDFSKPAYANDFTAFDQSQDGAMLQFE 1169
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF I
Sbjct: 1170 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNI 1229
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSFALLK
Sbjct: 1230 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 1258
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 308 bits (789), Expect = 5e-82
Identities = 145/149 (97%), Positives = 149/149 (100%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFR+ALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFREALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 307 bits (786), Expect = 1e-81
Identities = 144/149 (96%), Positives = 148/149 (99%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 306 bits (783), Expect = 2e-81
Identities = 143/149 (95%), Positives = 148/149 (99%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCE+TPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCERTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 305 bits (781), Expect = 4e-81
Identities = 143/149 (95%), Positives = 147/149 (98%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGP FDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPAFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 303 bits (777), Expect = 1e-80
Identities = 143/149 (95%), Positives = 147/149 (98%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 303 bits (777), Expect = 1e-80
Identities = 143/149 (95%), Positives = 147/149 (98%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 303 bits (777), Expect = 1e-80
Identities = 143/149 (95%), Positives = 147/149 (98%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLN WDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1122 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNCWDFSKPSYANDFTAFDQSQDGAMLQFE 1181
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1182 ILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 1241
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEGTAQIYAGDDCAIAQVCPEKPSF+LLK
Sbjct: 1242 PEGTAQIYAGDDCAIAQVCPEKPSFSLLK 1270
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 303 bits (775), Expect = 2e-80
Identities = 142/149 (95%), Positives = 147/149 (98%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFRDAL PNNIMINCEKTPQDLSRWVLN+WDFSKPSYANDFTAFDQSQDGAMLQFE
Sbjct: 453 RYMRRFRDALRPNNIMINCEKTPQDLSRWVLNHWDFSKPSYANDFTAFDQSQDGAMLQFE 512
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 513 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLTIMRLTGEGPTFDANTECNIAYTHTRFDI 572
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEG AQIYAGDDCAI+QVCPEKPSF+LLK
Sbjct: 573 PEGAAQIYAGDDCAISQVCPEKPSFSLLK 601
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
gi|23491554|dbj|BAC16785.1| RNA-dependent RNA polymerase
[Tulip virus X]
Length = 1361
Score = 279 bits (714), Expect = 2e-73
Identities = 129/149 (86%), Positives = 140/149 (93%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR+RDAL PNNIMINCE+TP DLSRWV N+WDF+KP YANDFTAFDQSQDGAMLQFE
Sbjct: 1103 RYMRRYRDALGPNNIMINCERTPADLSRWVRNHWDFTKPXYANDFTAFDQSQDGAMLQFE 1162
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAK+FNLPEWVIEGYLDIKL+P+IF GTL+IMRLTGEGPTFDANTECNIAYTHTRF I
Sbjct: 1163 ILKAKFFNLPEWVIEGYLDIKLTPQIFTGTLAIMRLTGEGPTFDANTECNIAYTHTRFHI 1222
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
P+ AQ+YAGDDCAIA+VC EKPSFALLK
Sbjct: 1223 PDHVAQLYAGDDCAIAEVCQEKPSFALLK 1251
>gb|ADE10202.1| viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 248 bits (633), Expect = 6e-64
Identities = 117/148 (79%), Positives = 131/148 (88%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFR+ L PN+I INCE TP+DLSR++ NYWDF SYANDFTAFDQSQDGAMLQFE
Sbjct: 1129 RYMRRFREVLGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDGAMLQFE 1188
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAK+FN+PE +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1189 ILKAKHFNIPEEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDI 1248
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALL 5
P GTAQ+YAGDD AIA V PE+PSF L+
Sbjct: 1249 PPGTAQLYAGDDSAIACVPPERPSFKLI 1276
>ref|YP_224084.1| viral replicase [Hydrangea ringspot virus] gi|56792005|gb|AAW30448.1|
viral replicase [Hydrangea ringspot virus]
Length = 1386
Score = 244 bits (624), Expect = 6e-63
Identities = 116/148 (78%), Positives = 130/148 (87%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRRFR+AL PN+I INCE TP+DLSR++ NYWDF SYANDFTAFDQSQD AMLQFE
Sbjct: 1129 RYMRRFREALGPNHIKINCEATPKDLSRFIQNYWDFKPASYANDFTAFDQSQDAAMLQFE 1188
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAK+FN+P +I+GYLDIKL+ KIFLG L IMRLTGEGPTFDANTECNIAYTHTRF+I
Sbjct: 1189 ILKAKHFNIPGEIIQGYLDIKLNAKIFLGVLGIMRLTGEGPTFDANTECNIAYTHTRFDI 1248
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALL 5
P GTAQ+YAGDD AIA V PE+PSF L+
Sbjct: 1249 PPGTAQLYAGDDSAIACVPPERPSFKLI 1276
>ref|YP_002647027.1| replicase [Allium virus X] gi|224579235|gb|ACN58194.1| replicase
[Allium virus X]
Length = 1701
Score = 233 bits (594), Expect = 2e-59
Identities = 107/149 (71%), Positives = 125/149 (83%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR R+A P IMINCEK PQ LS W+ NYW F+ +YANDFT FDQSQDGAMLQFE
Sbjct: 1450 RYMRRMREAFQPPEIMINCEKDPQTLSHWIQNYWKFNSYAYANDFTQFDQSQDGAMLQFE 1509
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAK+ ++PEWV+EGYLDIK + K+F G LSIMRLTGEGPTFDANTECNIAYTH RF++
Sbjct: 1510 ILKAKHHSIPEWVLEGYLDIKTNAKVFSGVLSIMRLTGEGPTFDANTECNIAYTHLRFDV 1569
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
P+GTAQ+YAGDD A++ + PE+PSFA K
Sbjct: 1570 PKGTAQLYAGDDSALSCLPPERPSFADFK 1598
>ref|NP_042695.1| RNA-dependent RNA polymerase [Cassava common mosaic virus]
gi|773405|gb|AAC54775.1| ORF 1; putative RNA dependent
RNA polymerase [Cassava common mosaic virus]
gi|1587823|prf||2207297A ORF 1
Length = 1449
Score = 232 bits (592), Expect = 3e-59
Identities = 112/149 (75%), Positives = 123/149 (82%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR RD P +IMINCE+TP DLS W LNYW+F KPSYANDFTAFDQSQDGAMLQFE
Sbjct: 1196 RYMRRIRDIYMPEHIMINCERTPTDLSYWALNYWNFDKPSYANDFTAFDQSQDGAMLQFE 1255
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKAK+ N+PEWV+EGYLDIKL +IFLGTLSIMRLTGE TFDANTECNIAYTHTRF+I
Sbjct: 1256 ILKAKHHNIPEWVLEGYLDIKLDSRIFLGTLSIMRLTGEYQTFDANTECNIAYTHTRFDI 1315
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
PEG AQ D A+ C EKPSF L++
Sbjct: 1316 PEGVAQ-----DSAMDATCLEKPSFKLIE 1339
>gb|AFM77886.1| replicase [Hosta virus X]
Length = 1473
Score = 223 bits (567), Expect = 3e-56
Identities = 104/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR RD P +I+INCEKTP +S +V WDFS +YANDFTAFDQSQDGAMLQFE
Sbjct: 1202 RYMRRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFE 1261
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
I+KAK+ N+PE +I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +
Sbjct: 1262 IIKAKFHNIPEDIILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNV 1321
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSF 14
PE AQ+YAGDD A+++VCPEK SF
Sbjct: 1322 PENVAQVYAGDDSALSKVCPEKDSF 1346
>ref|YP_002308464.1| replicase [Hosta virus X] gi|58415284|emb|CAF04078.1| replicase
[Hosta virus X]
Length = 1507
Score = 223 bits (567), Expect = 3e-56
Identities = 104/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR RD P +I+INCEKTP +S +V WDFS +YANDFTAFDQSQDGAMLQFE
Sbjct: 1236 RYMRRIRDRFCPKHILINCEKTPTQISDFVKAQWDFSDFAYANDFTAFDQSQDGAMLQFE 1295
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
I+KAK+ N+PE +I GY+DIK + KIFLGTL+IMRLTGEGPTFDANTECNIAYTH RF +
Sbjct: 1296 IIKAKFHNIPEDIILGYMDIKTNAKIFLGTLAIMRLTGEGPTFDANTECNIAYTHLRFNV 1355
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSF 14
PE AQ+YAGDD A+++VCPEK SF
Sbjct: 1356 PENVAQVYAGDDSALSKVCPEKDSF 1380
>ref|NP_148778.1| RNA-dependent RNA polymerase [Cactus virus X]
gi|14582654|gb|AAK69579.1|AF308158_1 RNA-dependent RNA
polymerase [Cactus virus X]
Length = 1543
Score = 219 bits (558), Expect = 3e-55
Identities = 99/149 (66%), Positives = 123/149 (82%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMRR R+ P NIMINCE+TP++L+ W +W+F++ SYAND+TAFDQSQDGAMLQFE
Sbjct: 1289 RYMRRVREVFQPKNIMINCERTPEELTSWAAEHWNFNRNSYANDYTAFDQSQDGAMLQFE 1348
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
ILKA++ ++PE IEGYLD+K S FLG L IMRLTGEGPTFDANTECNIA+ HT+ +I
Sbjct: 1349 ILKARHHSIPEVYIEGYLDLKCSSMTFLGILKIMRLTGEGPTFDANTECNIAFAHTKLKI 1408
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
P GTAQ+YAGDDCA+A V +KPSF +++
Sbjct: 1409 PIGTAQLYAGDDCALATVPEDKPSFKMIE 1437
>gb|AAF67818.1|AF111193_1 replicase [Potato virus X]
Length = 1456
Score = 219 bits (557), Expect = 4e-55
Identities = 102/149 (68%), Positives = 121/149 (81%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMR FR A P + INCE TP+D+S W LN W+F +PS AND+TAFDQSQDGAMLQFE
Sbjct: 1199 RYMRWFRQAFQPKEVFINCETTPEDMSAWALNNWNFGRPSLANDYTAFDQSQDGAMLQFE 1258
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
+LKAK+ +PE +I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+I
Sbjct: 1259 VLKAKHHCIPEEIIQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDI 1318
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
P GTAQ+YAGDD A+ V KPSF L+
Sbjct: 1319 PAGTAQVYAGDDSALDCVPEVKPSFHRLE 1347
>gb|ABP87980.1| RNA dependent RNA polymerase [Potato virus X]
Length = 1456
Score = 219 bits (557), Expect = 4e-55
Identities = 103/149 (69%), Positives = 121/149 (81%)
Frame = -3
Query: 448 RYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFE 269
RYMR FR A P + INCE TP+D+S WVLN WDF +PS AND+TAFDQSQDGAMLQFE
Sbjct: 1199 RYMRWFRQAFQPKEVFINCETTPEDMSAWVLNNWDFGRPSLANDYTAFDQSQDGAMLQFE 1258
Query: 268 ILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEI 89
+LKAK+ +PE +I+ Y+DIK + +IFLGTLSIMRLTGEGPTFDANTECNIAYTHT+F+I
Sbjct: 1259 VLKAKHHCIPEEIIQAYIDIKTNAQIFLGTLSIMRLTGEGPTFDANTECNIAYTHTKFDI 1318
Query: 88 PEGTAQIYAGDDCAIAQVCPEKPSFALLK 2
P GTAQ+YAGDD A+ V K SF L+
Sbjct: 1319 PAGTAQVYAGDDSALDCVPEVKHSFHRLE 1347