BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021379
         (1330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   2e-19
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    78   7e-12
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-11
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    75   5e-11
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    72   7e-10
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    70   2e-09
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A...    67   1e-08
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    67   2e-08
ref|XP_002454911.1| hypothetical protein SORBIDRAFT_03g001293 [S...    67   2e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    66   4e-08
ref|XP_006580409.1| PREDICTED: putative ribonuclease H protein A...    65   5e-08
gb|EPS59181.1| hypothetical protein M569_15629, partial [Genlise...    64   1e-07
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          64   1e-07
ref|XP_006469101.1| PREDICTED: putative ribonuclease H protein A...    64   1e-07
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...    64   1e-07
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    64   1e-07
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    64   1e-07
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]        64   2e-07
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    64   2e-07
ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [S...    64   2e-07

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  103 bits (257), Expect = 2e-19
 Identities = 65/198 (32%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
 Frame = -2

Query: 573  KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTL-----INI 409
            K+ NFLWK C+DGL T +RL + H+ VP  C  C+ P E + H  F+CP TL     +  
Sbjct: 1060 KIKNFLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLDIYSHLED 1119

Query: 408  RKQNIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTG 229
            + Q     S    L     + +   C +   LT      L+  WW VW  RN++IF    
Sbjct: 1120 KFQWPAYPSWFSTLQLSSFRSVLEACHIN--LTLEYLTKLSIVWWHVWYFRNKLIFNNES 1177

Query: 228  PTTIKDLTLYIKTLILNWNKT--KKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKIN 55
             T+    +  I + +  W K   + P  + P   K      R  +N+ W  P +   K+N
Sbjct: 1178 -TSFSQASFIIHSFMGKWEKANLEIPSFNTPL-PKDCKLPVRSGKNLIWSPPNEDVLKVN 1235

Query: 54   FDGSKLPNGPIGTGHIIR 1
            FDGSKL NG    G +IR
Sbjct: 1236 FDGSKLDNGQAAYGFVIR 1253


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 12/203 (5%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           +V   +W++C +  PT+ RL  + V  P AC  C +P+ED  H  F C   +      N+
Sbjct: 67  RVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANV 126

Query: 393 YIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTIK 214
           +    I    +      D+  +L   L+  +   + T  W +W  RN  ++Q    +++ 
Sbjct: 127 W--HLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVT 184

Query: 213 DLTLYIKTLILNWNKTK----------KPETDEP-SHQKHNPAQRRKTRNIKWEKPRQGF 67
            L    K L+  W K             P    P +H   N   R    NI+W KP+ G 
Sbjct: 185 ILE-RAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNR--YGNIRWRKPKSGR 241

Query: 66  YKINFDGS-KLPNGPIGTGHIIR 1
            K N D S    +  +G G  IR
Sbjct: 242 LKCNVDASFSTSSNKVGIGMCIR 264


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
 Frame = -2

Query: 573  KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
            K+ +FLW+ C   L  K RL  +H++V   C  C +P E +NH LF+C         + I
Sbjct: 1056 KLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFA------RAI 1109

Query: 393  YIESQIRKLNTDGKKPIDLFCDLQSVLTKH----EWVCLATTWWGVWIHRNQIIFQTTGP 226
            +  S    L  +   P+  F +    L KH    E+  + +  W  W  RN++IF+    
Sbjct: 1110 WQVSGFASLMMNA--PLSSFSERLEWLAKHATKEEFRTMCSFMWAGWFCRNKLIFE---- 1163

Query: 225  TTIKDLTLYIKTLILNWNKTKKPETD--EPSHQKHNPAQRRKTRNIKWEKPRQGFYKINF 52
              + D  L  K       +  K   D  E +      +      +  W  P  G +K+NF
Sbjct: 1164 NELSDAPLVAK-------RFSKLVADYCEYAGSVFRGSGGGCGSSALWSPPPTGMFKVNF 1216

Query: 51   DGSKLPNGPIGTGHIIR 1
            D    PNG +G G +IR
Sbjct: 1217 DAHLSPNGEVGLGVVIR 1233


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           KV NFLW+ C + LPT+ RL  K V     C  C++  ED NH  F C  +++  ++  +
Sbjct: 377 KVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGL 436

Query: 393 YIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTIK 214
           +    +   + +   P ++F  LQ  L + +    + T W +W HRN  ++      T +
Sbjct: 437 W-SPLMAVFDINVSFPTNVFAILQH-LDQQQKQIFSVTLWSIWKHRNNKVWNNI-TDTAQ 493

Query: 213 DLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGS-KL 37
           D+     +L+ +W   +      P     NP+      ++KW KP  G +  N D S   
Sbjct: 494 DICARAGSLLTSWRNAQNIRHPSP----QNPS---TPNDLKWVKPSPGRFTCNVDASFSQ 546

Query: 36  PNGPIGTGHIIR 1
               +G G  IR
Sbjct: 547 ARNRVGIGVCIR 558


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 71.6 bits (174), Expect = 7e-10
 Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
 Frame = -2

Query: 483 CDSCNNPYEDLNHFLFECPNTLINIRKQNIYIESQIRKLNTDGKKPIDLFCD-LQSVLTK 307
           C  C+NP E + H L +C     +  K+   I   + + N +G       CD LQ + TK
Sbjct: 83  CPLCSNPGESIYHALIDC-----SFVKEVWVISVLVSRGNRNGS-----ICDWLQEIFTK 132

Query: 306 HE---WVCLATTWWGVWIHRNQIIFQT--TGPTTIKDLTLYIKTLILNWNKTKKPETDEP 142
            +   W C+A   W +WIHRN++++ +    P  I D  +      L   +T  P  D  
Sbjct: 133 FDKSTWHCIAAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNN 192

Query: 141 SHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGSKL-PNGPIGTGHIIR 1
               HN A        KW+KP+ G  K N D S     G IG G+++R
Sbjct: 193 EVFNHNLA--------KWKKPKSGSLKCNVDASTFNQQGMIGAGYVLR 232


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
 Frame = -2

Query: 573  KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
            K++NF W+   + LPT+  L  +HV  P+ C  C +  E   H L EC      +  +++
Sbjct: 519  KILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVEC------VAARDV 572

Query: 393  YIESQIRKLNTDGKKPID------LFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTT 232
            + ES +  L  +    +D       +CD   V  K+  VC     WG+W  RN +++   
Sbjct: 573  WDESGLAMLQGNFGSFVDWLATMFAYCDF-VVFAKYLAVC-----WGLWWRRNDVVWNGR 626

Query: 231  GPTTIKDLTLYIKTLILNW---NKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYK 61
                 + +     T++ +W   N+T       PS+              KW+KP  G+ K
Sbjct: 627  -IWHSQQVVNGCFTMLESWFHANETLATAVTVPSYSS------------KWQKPDYGWIK 673

Query: 60   INFDGSKLPN-GPIG 19
            IN DG+  P+ G IG
Sbjct: 674  INVDGAVFPDKGAIG 688


>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X2 [Citrus sinensis]
          Length = 320

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           KV  FLW+   + LPT   L ++ V     C  C    E+++H L +        R  +I
Sbjct: 63  KVKIFLWRTTKNLLPTMENLWKRKVVQEPICQICKKELENISHALLDYKLAKKMWRHTHI 122

Query: 393 YIESQIRKLNTDGKKPIDLFCDLQSV---LTKHEWVCLATTWWGVWIHRNQIIFQTTGPT 223
             E Q   +        D    LQS+   LT  E    +  WWGVW  RN++I++   P 
Sbjct: 123 AAEVQNEAIQ-------DFLSMLQSLTKKLTTREIELASFVWWGVWNARNKVIYERKKPE 175

Query: 222 TIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGS 43
               +   +  ++  + + K+PE      Q+   ++ R+T   +WE P +G++KIN D +
Sbjct: 176 LAISIA-KVTAVMEAYQRVKEPE-----QQQLKQSEPRETH--QWEPPPEGWHKINVDAT 227

Query: 42  KLPNGPI-GTGHIIR 1
              N  I G G +I+
Sbjct: 228 IDKNQQIAGLGIVIK 242


>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
 Frame = -2

Query: 522 ARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNIYIESQIRKLNTDGKKPI 343
           + L  K V V   C  C+ P E + + L +C     +  K+   I   I + N +G    
Sbjct: 2   SNLVLKRVNVQDLCPLCSKPGESIYYALIDC-----SFVKEVWVISVLISRGNRNGS--- 53

Query: 342 DLFCD-LQSVLTKHE---WVCLATTWWGVWIHRNQIIF--QTTGPTTIKD--LTLYIKTL 187
              CD LQ + TK E   W C+A   W +WIHRN++++  +   PT I D  +T   K L
Sbjct: 54  --ICDWLQEMFTKFEKSTWGCIAVLVWNLWIHRNEVVWYSKRKQPTQIVDGAVTYLHKWL 111

Query: 186 ILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGSKL-PNGPIGTGH 10
           I    +T  P  D      HN A        KW+KP+ G+ K N D +     G IG   
Sbjct: 112 IA--QQTNPPSPDNSGLFHHNLA--------KWKKPKTGWPKCNIDAAIFNQQGMIGADC 161

Query: 9   IIR 1
           ++R
Sbjct: 162 VLR 164


>ref|XP_002454911.1| hypothetical protein SORBIDRAFT_03g001293 [Sorghum bicolor]
           gi|241926886|gb|EES00031.1| hypothetical protein
           SORBIDRAFT_03g001293 [Sorghum bicolor]
          Length = 446

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
 Frame = -2

Query: 576 HKVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPN-----TLIN 412
           +KV +F+W+ CH+  P +  L ++HV +   C  CN   ED  H   +C        L+N
Sbjct: 212 NKVKHFMWRFCHNSHPLRMNLKRRHVDIDTKCVVCNRFDEDGAHLFMKCKPMKRVWQLLN 271

Query: 411 IRKQNIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQII--FQ 238
           + +    + S+ R      ++ +    D+QS+     W+C        W  RN+I     
Sbjct: 272 MNELRELLMSK-RSAREVVEEIMIQKEDIQSLYCILLWIC--------WSERNRIREGEH 322

Query: 237 TTGPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKI 58
           +  P  +  L+   + +   W + KKP      H+ HNP   +     +WE+P + F K 
Sbjct: 323 SRDPEILAHLS---RVIAEEWRQEKKP------HKAHNPVVPQ-----RWERPERNFVKA 368

Query: 57  NFDGSKLPN-GPIGTGHIIR 1
           N D +  PN G  G G I+R
Sbjct: 369 NCDAAFDPNTGNGGWGCILR 388


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 12/203 (5%)
 Frame = -2

Query: 573  KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
            K+ +FLW+  ++ L   + LA +H+A   +C  C +  E +NH LF+CP   +      +
Sbjct: 1062 KIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPL 1121

Query: 393  YIESQIRKLNTDGKKPIDLFCDLQSVLTKHE--------WVCLATTWWGVWIHRNQIIF- 241
                        G+    LF ++  VL+ H+           +    W +W +RN ++F 
Sbjct: 1122 -------PAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFK 1174

Query: 240  --QTTGPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGF 67
              + T P  I   T  +      WN  K+P+    S          + R +KW+ P  G+
Sbjct: 1175 GREFTAPQVILKATEDMDA----WNNRKEPQPQVTS--------STRDRCVKWQPPSHGW 1222

Query: 66   YKINFDGSKLPN-GPIGTGHIIR 1
             K N DG+   + G  G G ++R
Sbjct: 1223 VKCNTDGAWSKDLGNCGVGWVLR 1245


>ref|XP_006580409.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 309

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
 Frame = -2

Query: 561 FLWKICHDGLPTKARLAQKHVAV-PLACDSCNNPYEDLNHFLFECPNTLINIRKQNIYIE 385
           F W++  D LPTK+ L ++HV V  L C  C N  ED +H  F C      I+ Q ++ E
Sbjct: 155 FAWRLIRDRLPTKSNLRRRHVEVNDLVCPFCRNKEEDASHLFFNC------IKTQPLWWE 208

Query: 384 SQIRKLNTDGKKPID---LFCD----LQSVLTKHEWVC--LATTWWGVWIHRNQIIFQTT 232
           S +  +NT G  PI+    F      +   +  + W C  +A T W +W  RN++IF   
Sbjct: 209 S-LSWINTSGAFPINPRQHFLQHENGMNGGIIYNRWKCWWVALT-WTIWQQRNRVIFLN- 265

Query: 231 GPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKH 127
              T     L   TL L W   K  E D   H  H
Sbjct: 266 --ETFNVSKLMDDTLFLVWTWLKAMEKDFIMHFNH 298


>gb|EPS59181.1| hypothetical protein M569_15629, partial [Genlisea aurea]
          Length = 367

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 55/201 (27%), Positives = 81/201 (40%), Gaps = 10/201 (4%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIR---- 406
           +V++F W+   D LP KA LA++ + V  +CD C    E   H    CP +    R    
Sbjct: 64  RVLSFGWRFARDILPVKANLARRRICVETSCDICGGVSESWFHAFISCPFSQAVWRLGGY 123

Query: 405 KQNIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHR-----NQIIF 241
             NI+        + +   P+D     Q  L + +   L  T W +W HR     NQ   
Sbjct: 124 AWNIH--------DPEPLHPLDWLVSNQRQLQEEKMAELLVTLWCLWRHRLDHRHNQ--- 172

Query: 240 QTTGPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKH-NPAQRRKTRNIKWEKPRQGFY 64
            TT P     +   I+  I         E    + Q H +P Q    +  +WE+P   F 
Sbjct: 173 ATTDPLRTHHM---IRCHI---------EASSSAFQVHIDPMQPPPLQQRQWERPPDDFL 220

Query: 63  KINFDGSKLPNGPIGTGHIIR 1
           K+NFD  +      G G +IR
Sbjct: 221 KLNFDSGRCGAAGTGMGGLIR 241


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 2/177 (1%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           ++   LW++  + L  +  L ++ + V   C  C  P E   H  F CP TL   ++ N+
Sbjct: 292 RIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAHLFFCCPYTLDIWKEVNV 351

Query: 393 YIESQIRKLNTDGKKPIDLFCD-LQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTI 217
            I+        +  + I L  D L ++    E    A T W +W  RN I+F+T     I
Sbjct: 352 QIQ-------VESSENILLAIDSLLNIRDPVEQSRRAATLWIIWRVRNSIVFRTGEEIVI 404

Query: 216 -KDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFD 49
            K+L    +     W      E         NP  R   R  KW  P  GFYKIN D
Sbjct: 405 CKELEKGFRF----WQDFMDTEG--------NPTVRGAPRTSKWNAPTAGFYKINVD 449


>ref|XP_006469101.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 684

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 7/194 (3%)
 Frame = -2

Query: 561 FLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECP------NTLINIRKQ 400
           FLW+  H  L TK  L+++H+ + + C+ C  P ED+ H L +C         L+  R  
Sbjct: 396 FLWQALHAKLKTKEELSRRHIPISIGCERCGAPIEDVIHVLRDCQCIMRVWLRLVPARNH 455

Query: 399 NIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCL-ATTWWGVWIHRNQIIFQTTGPT 223
             + +S +R   T   +      +   + +   W C+     W +W  RN   F   G  
Sbjct: 456 LSFFQSTLRDWITANLQ------NKWKIASPSTWECIFGVAIWRLWFWRNH--FMVDGKL 507

Query: 222 TIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGS 43
           T    T+Y+  +    N+  K      S Q      RRK   I W  P   + K+N DGS
Sbjct: 508 T-DSSTIYL-DITARANEIHKLNNSHISQQ-----PRRKEIFIGWIPPPWPWCKLNTDGS 560

Query: 42  KLPNGPIGTGHIIR 1
              +   G G I+R
Sbjct: 561 CRKSEGAGAGGILR 574


>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 498

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           KV++  W+ CHD LPT+A+L  K     L C SC +P E   H +  CP        Q I
Sbjct: 189 KVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACPIA------QTI 242

Query: 393 YIES--QIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIF----QTT 232
            + S   I  L +      +   +  + L+  ++  L    WG+W +RN +++    QT 
Sbjct: 243 LLGSHLNITVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNNMLWSDKQQTA 302

Query: 231 GPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINF 52
                  ++ Y +   +N+ + K  +T               ++ +KW  P     K+N 
Sbjct: 303 QEIICGTMSWYHEFTTINYPQQKPSKT---------------SQRVKWFPPAVDHLKLNV 347

Query: 51  DGSKLPNGPI-GTGHIIR 1
           DG+ +PN    G G I+R
Sbjct: 348 DGAFMPNETEGGVGGILR 365


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           K+ NF+W++C   LPT+ +L  K V  P AC +C+   ED+ H    C   +   +  ++
Sbjct: 179 KIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDL 238

Query: 393 YIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTIK 214
           + E Q   ++ D    + +F  LQ    +   + +  T W +W  RN  +++    +   
Sbjct: 239 WSEIQQAVIHFDTASAV-IFDLLQRFTLEQSQIFV--TMWSLWKRRNLKVWENKNESCAM 295

Query: 213 DLTLYIKTLILNW---NKTKKPETDEPSHQKHNP----------------------AQRR 109
            +    + ++  W     T+   T + +H + NP                      AQ+ 
Sbjct: 296 TVD-RARVMMEEWQLATATRSAPTHQHTHLQ-NPSAATAQQPVVHLQQSHVASAVSAQQS 353

Query: 108 KTRNIKWEKPRQGFYKINFD-GSKLPNGPIGTGHIIR 1
              +I WE+P +G +K N D G       IG G  +R
Sbjct: 354 LVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVR 390


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
 Frame = -2

Query: 573 KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
           K+ NF+W++C   LPT+ +L  K V  P AC +C+   ED+ H    C   +   +  ++
Sbjct: 272 KIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDL 331

Query: 393 YIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTIK 214
           + E Q   ++ D    + +F  LQ    +   + +  T W +W  RN  +++    +   
Sbjct: 332 WSEIQQAVIHFDTASAV-IFDLLQRFTLEQSQIFV--TMWSLWKRRNLKVWENKNESCAM 388

Query: 213 DLTLYIKTLILNW---NKTKKPETDEPSHQKHNP----------------------AQRR 109
            +    + ++  W     T+   T + +H + NP                      AQ+ 
Sbjct: 389 TVD-RARVMMEEWQLATATRSAPTHQHTHLQ-NPSAATAQQPVVHLQQSHVASAVSAQQS 446

Query: 108 KTRNIKWEKPRQGFYKINFD-GSKLPNGPIGTGHIIR 1
              +I WE+P +G +K N D G       IG G  +R
Sbjct: 447 LVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVR 483


>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
          Length = 1255

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 45/189 (23%), Positives = 80/189 (42%)
 Frame = -2

Query: 573  KVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIRKQNI 394
            K++ F W++C + LPTKA L +++V     C+ C+   E+ +H +   P     +   NI
Sbjct: 950  KILLFAWRLCRNILPTKALLRRRNVCRDSQCEVCDQEEENWHHAIATYP--WAKLVWSNI 1007

Query: 393  YIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQIIFQTTGPTTIK 214
            ++   +  L+     P+         LT  ++  +    W +W  RN++      P  + 
Sbjct: 1008 HLPWAL--LSASLSDPLIWVHHCFRALTASDFRKMLIGCWAIWSKRNEVRLFARSPDVMS 1065

Query: 213  DLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFDGSKLP 34
             +  +I T +        P   EP    H+P   R     +WE P  G +K+N D  +  
Sbjct: 1066 TVA-FINTYLATSTTAFDP---EPQPLPHSPTVTR-----RWEAPAHGTFKVNVDSGRAG 1116

Query: 33   NGPIGTGHI 7
            N  +  G I
Sbjct: 1117 NHTVCAGII 1125


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
 Frame = -2

Query: 579 MHKVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPNTLINIR-K 403
           M K+ +FLW+     L T  RL  + + +  +C  C+   E +NH LF CP   +  R  
Sbjct: 168 MPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLS 227

Query: 402 QNIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTW--WGVWIHRNQIIFQTTG 229
            +  I +Q+  ++ D ++ I    +     T  ++  L   W  W +W  RN ++F    
Sbjct: 228 DSSLIRNQL--MSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFR 285

Query: 228 PTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKINFD 49
            +  K + L  K    +W    +     PS     P ++     I+W  P   + K NFD
Sbjct: 286 ESPSKTV-LSAKAETHDWLNATQSHKKTPS-----PTRQIAENKIEWRNPPATYVKCNFD 339


>ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
           gi|241935612|gb|EES08757.1| hypothetical protein
           SORBIDRAFT_05g022920 [Sorghum bicolor]
          Length = 705

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
 Frame = -2

Query: 576 HKVINFLWKICHDGLPTKARLAQKHVAVPLACDSCNNPYEDLNHFLFECPN-----TLIN 412
           +KV +F+W+ CH+  P +  L ++HV +   C  CN   ED  H   +C        L+N
Sbjct: 456 NKVKHFMWRFCHNSHPLRMNLKRRHVDIDTKCVVCNRFDEDGAHLFMKCKPMKRVWQLLN 515

Query: 411 IRKQNIYIESQIRKLNTDGKKPIDLFCDLQSVLTKHEWVCLATTWWGVWIHRNQII--FQ 238
           + +    + S+ R      ++ +    D+QS+     W+C        W  RN+I     
Sbjct: 516 MNELRELLMSK-RSAREVVEEIMIQKEDIQSLCCILLWIC--------WSERNRIREGEH 566

Query: 237 TTGPTTIKDLTLYIKTLILNWNKTKKPETDEPSHQKHNPAQRRKTRNIKWEKPRQGFYKI 58
           +  P  +  L+   + +   W + KKP       + HNP   +     +WE+P + F K 
Sbjct: 567 SRDPEILAHLS---RVIAEEWRQEKKPP------EAHNPVVPQ-----RWERPERNFVKA 612

Query: 57  NFDGSKLPN-GPIGTGHIIR 1
           N D +  PN G  G G I+R
Sbjct: 613 NCDAAFDPNSGNGGWGCILR 632