BLASTX nr result
ID: Rheum21_contig00021268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021268
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA46901.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 63 5e-08
gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 63 5e-08
sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carbox... 62 1e-07
gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 62 1e-07
gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 61 1e-07
sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carbox... 61 2e-07
ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidops... 61 2e-07
ref|XP_002868775.1| ribulose bisphosphate carboxylase small chai... 61 2e-07
ref|XP_002888576.1| ribulose bisphosphate carboxylase small chai... 60 2e-07
gb|ABK25403.1| unknown [Picea sitchensis] 60 2e-07
ref|XP_006391132.1| hypothetical protein EUTSA_v10019199mg [Eutr... 60 3e-07
gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 60 3e-07
ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1... 60 4e-07
ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Caps... 60 4e-07
ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Caps... 60 4e-07
ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Caps... 60 4e-07
gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thaliana] 60 4e-07
gb|AAK49590.1|AF372874_1 F1O19.10/F1O19.10 [Arabidopsis thaliana] 60 4e-07
pdb|1IR1|S Chain S, Crystal Structure Of Spinach Ribulose-1,5-Bi... 60 4e-07
sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carbo... 60 4e-07
>gb|ABA46901.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 181
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP+AFV IGFDNNRQVQCISFI HKP
Sbjct: 146 EECKKEYPRAFVGIIGFDNNRQVQCISFIAHKP 178
>gb|ABA46900.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYPKAF+R IGFDNNRQVQCISFI KP
Sbjct: 145 EECKKEYPKAFIRIIGFDNNRQVQCISFIAFKP 177
>sp|O24045.1|RBS_MUSAC RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2258433|gb|AAB63287.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Musa acuminata]
Length = 180
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 145 EECKKEYPHAFIRIIGFDNNRQVQCISFIAYKP 177
>gb|ABQ42552.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
gi|238801314|gb|ACR56377.1| chloroplast
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 145 EECKKEYPHAFIRIIGFDNNRQVQCISFIAYKP 177
>gb|ABA46899.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Musa acuminata AAA Group]
Length = 180
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDNNRQVQC+SFI +KP
Sbjct: 145 EECKKEYPHAFIRIIGFDNNRQVQCVSFIAYKP 177
>sp|P13951.1|RBS_SINAL RecName: Full=Ribulose bisphosphate carboxylase small chain;
Short=RuBisCO small subunit gi|1345574|emb|CAA34458.1|
unnamed protein product [Sinapis alba]
Length = 82
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
+E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 44 QECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 76
>ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata] gi|297314612|gb|EFH45035.1| ribulose
bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
+E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 143 QECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
lyrata subsp. lyrata] gi|297314611|gb|EFH45034.1|
ribulose bisphosphate carboxylase small chain 1B
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
+E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 143 QECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002888576.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
lyrata subsp. lyrata] gi|297334417|gb|EFH64835.1|
ribulose bisphosphate carboxylase small chain 1A
[Arabidopsis lyrata subsp. lyrata]
Length = 180
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP+AF+R IGFDN+RQVQCISFI +KP
Sbjct: 143 EECKKEYPEAFIRIIGFDNSRQVQCISFIAYKP 175
>gb|ABK25403.1| unknown [Picea sitchensis]
Length = 188
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KK YP A++RC+GFDN RQ QCI+FIVHKP
Sbjct: 152 EECKKAYPNAYIRCLGFDNKRQTQCIAFIVHKP 184
>ref|XP_006391132.1| hypothetical protein EUTSA_v10019199mg [Eutrema salsugineum]
gi|557087566|gb|ESQ28418.1| hypothetical protein
EUTSA_v10019199mg [Eutrema salsugineum]
Length = 182
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN+RQVQCISFI +KP
Sbjct: 147 EECKKEYPNAFIRIIGFDNSRQVQCISFIAYKP 179
>gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Artemisia annua]
Length = 90
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
+E KKEYP AF+R IGFDN RQVQCISFI HKP
Sbjct: 55 QEAKKEYPNAFIRIIGFDNVRQVQCISFIAHKP 87
>ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana] gi|27735223|sp|P10795.2|RBS1A_ARATH RecName:
Full=Ribulose bisphosphate carboxylase small chain 1A,
chloroplastic; Short=RuBisCO small subunit 1A; Flags:
Precursor gi|11762170|gb|AAG40363.1|AF325011_1 000C10C11
[Arabidopsis thaliana]
gi|15294200|gb|AAK95277.1|AF410291_1 F1O19.10/F1O19.10
[Arabidopsis thaliana] gi|4204274|gb|AAD10655.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15451002|gb|AAK96772.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15809842|gb|AAL06849.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|16604426|gb|AAL24219.1| At1g67090/F1O19.10
[Arabidopsis thaliana] gi|16649141|gb|AAL24422.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065072|gb|AAL32690.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065270|gb|AAL32789.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17473628|gb|AAL38277.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260064|gb|AAM13379.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260080|gb|AAM13387.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20453287|gb|AAM19882.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|23198308|gb|AAN15681.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|25083492|gb|AAN72087.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|110741032|dbj|BAE98610.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|110741446|dbj|BAE98685.1| ribulose
bisphosphate carboxylase like protein, small subunit
[Arabidopsis thaliana] gi|110741475|dbj|BAE98695.1|
ribulose bisphosphate carboxylase like protein, small
subunit [Arabidopsis thaliana]
gi|110741865|dbj|BAE98874.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|332196473|gb|AEE34594.1| ribulose
bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana]
Length = 180
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 143 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Capsella rubella]
gi|482554525|gb|EOA18718.1| hypothetical protein
CARUB_v10007296mg [Capsella rubella]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 143 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006285696.1| hypothetical protein CARUB_v10007166mg [Capsella rubella]
gi|482554401|gb|EOA18594.1| hypothetical protein
CARUB_v10007166mg [Capsella rubella]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 143 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>ref|XP_006284616.1| hypothetical protein CARUB_v10005847mg [Capsella rubella]
gi|482553321|gb|EOA17514.1| hypothetical protein
CARUB_v10005847mg [Capsella rubella]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 143 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thaliana]
Length = 180
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 143 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>gb|AAK49590.1|AF372874_1 F1O19.10/F1O19.10 [Arabidopsis thaliana]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFDN RQVQCISFI +KP
Sbjct: 88 EECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 120
>pdb|1IR1|S Chain S, Crystal Structure Of Spinach Ribulose-1,5-Bisphosphate
CarboxylaseOXYGENASE (RUBISCO) COMPLEXED WITH CO2, MG2+
AND 2- Carboxyarabinitol-1,5-Bisphosphate
gi|20150192|pdb|1IR1|T Chain T, Crystal Structure Of
Spinach Ribulose-1,5-Bisphosphate CarboxylaseOXYGENASE
(RUBISCO) COMPLEXED WITH CO2, MG2+ AND 2-
Carboxyarabinitol-1,5-Bisphosphate
gi|20150194|pdb|1IR1|U Chain U, Crystal Structure Of
Spinach Ribulose-1,5-Bisphosphate CarboxylaseOXYGENASE
(RUBISCO) COMPLEXED WITH CO2, MG2+ AND 2-
Carboxyarabinitol-1,5-Bisphosphate
gi|20150196|pdb|1IR1|V Chain V, Crystal Structure Of
Spinach Ribulose-1,5-Bisphosphate CarboxylaseOXYGENASE
(RUBISCO) COMPLEXED WITH CO2, MG2+ AND 2-
Carboxyarabinitol-1,5-Bisphosphate
Length = 123
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFD+NRQVQC+SFI +KP
Sbjct: 88 EECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKP 120
>sp|Q43832.1|RBS2_SPIOL RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|1297052|emb|CAA66201.1|
ribulose-bisphosphate carboxylase [Spinacia oleracea]
Length = 180
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 297 EEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 199
EE KKEYP AF+R IGFD+NRQVQC+SFI +KP
Sbjct: 145 EECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKP 177