BLASTX nr result

ID: Rheum21_contig00021233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021233
         (265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305656.1| PREDICTED: putative pentatricopeptide repeat...   136   3e-30
ref|XP_006430161.1| hypothetical protein CICLE_v10013825mg [Citr...   135   6e-30
ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_002323422.2| hypothetical protein POPTR_0016s07840g [Popu...   130   1e-28
gb|EMJ04502.1| hypothetical protein PRUPE_ppa025850mg, partial [...   130   1e-28
emb|CBI30318.3| unnamed protein product [Vitis vinifera]              128   7e-28
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
gb|EXB39656.1| hypothetical protein L484_017129 [Morus notabilis]     127   1e-27
ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
gb|EOY08299.1| Pentatricopeptide repeat superfamily protein [The...   126   3e-27
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...   126   3e-27
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]   124   1e-26
ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c...   122   7e-26
ref|XP_004504658.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu...   108   7e-22
ref|XP_006403786.1| hypothetical protein EUTSA_v10010201mg [Eutr...   107   1e-21
gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus pe...   107   1e-21
ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21

>ref|XP_004305656.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Fragaria vesca subsp. vesca]
          Length = 601

 Score =  136 bits (342), Expect = 3e-30
 Identities = 64/86 (74%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSHSGL  EGL+ FSLM + Y +R  VKHYTC+VDLLGRAGKL+EA+KL++ M
Sbjct: 332 FISLLYACSHSGLTEEGLQFFSLMWDKYAVRAGVKHYTCVVDLLGRAGKLDEALKLVESM 391

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
           EVEKDEGLWSALLGACR+ GDL LAE
Sbjct: 392 EVEKDEGLWSALLGACRVHGDLDLAE 417


>ref|XP_006430161.1| hypothetical protein CICLE_v10013825mg [Citrus clementina]
           gi|557532218|gb|ESR43401.1| hypothetical protein
           CICLE_v10013825mg [Citrus clementina]
          Length = 586

 Score =  135 bits (340), Expect = 6e-30
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GLV EGLRLFS M +D+ +RPDVKHYTCMVDLLGRAG+L+EA+KLI+ M
Sbjct: 318 FVSLLYACSHTGLVEEGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKLIESM 377

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDEGLW ALLGACR+  ++ LAE
Sbjct: 378 SVEKDEGLWGALLGACRIHKNVDLAE 403


>ref|XP_004246881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Solanum lycopersicum]
          Length = 519

 Score =  133 bits (334), Expect = 3e-29
 Identities = 60/86 (69%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSHSGLV EG +LF+ MQ +Y ++PD+KH+TCMVDLLGRAGK++E++KLI+DM
Sbjct: 251 FVSLLYACSHSGLVEEGKQLFNSMQKEYGVKPDIKHFTCMVDLLGRAGKIDESLKLIEDM 310

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDEGLW ALLGACR+ G + LAE
Sbjct: 311 AVEKDEGLWGALLGACRIHGCVELAE 336


>ref|XP_002323422.2| hypothetical protein POPTR_0016s07840g [Populus trichocarpa]
           gi|550321072|gb|EEF05183.2| hypothetical protein
           POPTR_0016s07840g [Populus trichocarpa]
          Length = 574

 Score =  130 bits (328), Expect = 1e-28
 Identities = 59/86 (68%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GLV++GL+LFSLM   Y +RPDVKHYTCMVDLLGRAG+L++A++LI++M
Sbjct: 306 FISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
           EVEKDEG+W A LGACR+   + LAE
Sbjct: 366 EVEKDEGIWCAFLGACRIHRQVDLAE 391


>gb|EMJ04502.1| hypothetical protein PRUPE_ppa025850mg, partial [Prunus persica]
          Length = 554

 Score =  130 bits (328), Expect = 1e-28
 Identities = 58/86 (67%), Positives = 76/86 (88%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSHSGL+ EGLR+FSLM +++ +R D+KHYTCMVDLLGRAG+L+EA++L++ M
Sbjct: 286 FVSLLYACSHSGLIEEGLRIFSLMWDEFAVRADIKHYTCMVDLLGRAGRLDEALELVESM 345

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDE LW ALLGACR+ G++ LAE
Sbjct: 346 AVEKDERLWGALLGACRIHGNIDLAE 371


>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +3

Query: 6   LSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDME 185
           +S+LYACSH+GLV EGLR FSLM  DY +R DVKHYTC+VDLLGRAG+L+EA+KLI+ M 
Sbjct: 594 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 653

Query: 186 VEKDEGLWSALLGACRLIGDLSLAE 260
           VEKDEGLW A LGACR   D+ LAE
Sbjct: 654 VEKDEGLWGAFLGACRTHKDVVLAE 678


>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +3

Query: 6   LSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDME 185
           +S+LYACSH+GLV EGLR FSLM  DY +R DVKHYTC+VDLLGRAG+L+EA+KLI+ M 
Sbjct: 438 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 497

Query: 186 VEKDEGLWSALLGACRLIGDLSLAE 260
           VEKDEGLW A LGACR   D+ LAE
Sbjct: 498 VEKDEGLWGAFLGACRTHKDVVLAE 522


>gb|EXB39656.1| hypothetical protein L484_017129 [Morus notabilis]
          Length = 628

 Score =  127 bits (320), Expect = 1e-27
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GL+ EGLR FS M  +Y +RPDV+HYTCMVDLLGRAG+++EA  L++ M
Sbjct: 360 FVSLLYACSHAGLIEEGLRFFSSMWEEYSVRPDVRHYTCMVDLLGRAGRVDEAFGLVESM 419

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDEGLW ALLGACR+ G + +AE
Sbjct: 420 TVEKDEGLWCALLGACRIHGHVEMAE 445


>ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cicer arietinum]
          Length = 573

 Score =  127 bits (319), Expect = 2e-27
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GL+ +GLR F+ M  DY +RPD+KHYTC+VDL GRAG+L+EA KLI+ M
Sbjct: 305 FVSLLYACSHAGLIEDGLRFFNSMWEDYAVRPDIKHYTCVVDLFGRAGRLDEAAKLIETM 364

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            V KDE LWSALLGACR+ G++ LAE
Sbjct: 365 SVVKDERLWSALLGACRIHGNMELAE 390


>ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cicer arietinum]
          Length = 573

 Score =  127 bits (319), Expect = 2e-27
 Identities = 57/86 (66%), Positives = 72/86 (83%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GL+ +GLR F+ M  DY +RPD+KHYTC+VDL GRAG+L+EA KLI+ M
Sbjct: 305 FVSLLYACSHAGLIEDGLRFFNSMWEDYAVRPDIKHYTCVVDLFGRAGRLDEAAKLIETM 364

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            V KDE LWSALLGACR+ G++ LAE
Sbjct: 365 SVVKDERLWSALLGACRIHGNMELAE 390


>gb|EOY08299.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 809

 Score =  126 bits (317), Expect = 3e-27
 Identities = 55/86 (63%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+ YACSH+GLV+EGL+LF++M ++Y +RPDVKHYTCM+DLLGRAG+L+EA+ LI++M
Sbjct: 360 FVSLFYACSHAGLVDEGLQLFNMMWDEYAVRPDVKHYTCMIDLLGRAGRLDEALNLIENM 419

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            +EKDEGLW A+L ACR+   + LAE
Sbjct: 420 TIEKDEGLWGAMLAACRIHKHVELAE 445


>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform X1 [Glycine max]
           gi|571440956|ref|XP_006575303.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like isoform X2 [Glycine max]
          Length = 573

 Score =  126 bits (317), Expect = 3e-27
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GL+ EGLR F+ M  ++ +RPDVKHYTCMVDLLGRAG+L+EA++LI+ M
Sbjct: 305 FVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAM 364

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDE LWSALLGACR+   + LAE
Sbjct: 365 TVEKDERLWSALLGACRIHSKMELAE 390


>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  124 bits (311), Expect = 1e-26
 Identities = 59/84 (70%), Positives = 68/84 (80%)
 Frame = +3

Query: 9   SVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDMEV 188
           S+LYACSH+GLV EGLR FS M  DY +R DVKHYTC+VDLLGRAG+L+EA+KLI  M +
Sbjct: 367 SLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTI 426

Query: 189 EKDEGLWSALLGACRLIGDLSLAE 260
           EKDEGLW A LGACR   D+ LAE
Sbjct: 427 EKDEGLWGAFLGACRTHKDVVLAE 450



 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/85 (69%), Positives = 68/85 (80%)
 Frame = +3

Query: 6    LSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDME 185
            +S+LYACSH+GLV EGLR FS M  DY +R DVKHYTC+VDLLGRAG+L+EA+KLI  M 
Sbjct: 1042 VSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT 1101

Query: 186  VEKDEGLWSALLGACRLIGDLSLAE 260
             EKDEGLW A LGACR   D+ LAE
Sbjct: 1102 XEKDEGLWGAFLGACRTHKDVXLAE 1126


>ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
           gi|449500964|ref|XP_004161240.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+LYACSH+GL+ EG R FS M ++Y + PDVKHYTCMVDLLGRAG+L+EA+++I+ M
Sbjct: 356 FVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGM 415

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            VEKDE LW ALLGACR+   L LAE
Sbjct: 416 PVEKDEVLWGALLGACRIHRHLDLAE 441


>ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1530

 Score =  122 bits (305), Expect = 7e-26
 Identities = 56/86 (65%), Positives = 71/86 (82%)
 Frame = +3

Query: 3    FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
            F+S+LYACSH+GLV +GL L SLM   + +RPD+KH+TCMVDLLGRAG+L EA + I++M
Sbjct: 1386 FVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENM 1445

Query: 183  EVEKDEGLWSALLGACRLIGDLSLAE 260
             VEKDEGLWS+LLGACR+   + LAE
Sbjct: 1446 TVEKDEGLWSSLLGACRIHKRIDLAE 1471


>ref|XP_004504658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cicer arietinum]
          Length = 773

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = +3

Query: 6   LSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDME 185
           L +L+ACSH G+V +GLR+F+ M++ Y + P ++HY C+VDLLGR G LNEAV+ ID M 
Sbjct: 589 LCILFACSHGGMVEDGLRIFNQMESRYGVVPKMEHYACVVDLLGRVGHLNEAVEFIDRMR 648

Query: 186 VEKDEGLWSALLGACRLIGDLSLAET 263
           ++ DE +W ALLGACR+ G+  LAET
Sbjct: 649 IKPDEMVWQALLGACRIHGNFELAET 674


>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
           gi|550336888|gb|EEE92945.2| hypothetical protein
           POPTR_0006s22800g [Populus trichocarpa]
          Length = 604

 Score =  108 bits (270), Expect = 7e-22
 Identities = 50/86 (58%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+SVL ACSH+GL N+GL  F +M+  Y +RP  +HY+CMVDLLGRAG+LNEA +LI+ M
Sbjct: 318 FVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESM 377

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
           +V  D  LW ALLGAC++  ++ LAE
Sbjct: 378 QVRADGALWGALLGACKIHRNVELAE 403


>ref|XP_006403786.1| hypothetical protein EUTSA_v10010201mg [Eutrema salsugineum]
           gi|557104905|gb|ESQ45239.1| hypothetical protein
           EUTSA_v10010201mg [Eutrema salsugineum]
          Length = 628

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+L ACSH+G V EGL +F LM   Y  RP+VKHYTCM+DLLGRAG+L+EA ++I+ M
Sbjct: 361 FVSLLNACSHAGFVEEGLEIFDLMPK-YGTRPNVKHYTCMIDLLGRAGRLDEAREMIETM 419

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
            +EKDE LW + LGACR+  ++ +AE
Sbjct: 420 SIEKDETLWGSFLGACRIHKNVEMAE 445


>gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
          Length = 705

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+S+L ACSHSGLV+EG   F +MQ  Y I+P++KHY CMVDLLGRAG LN+A   ID+M
Sbjct: 437 FVSLLSACSHSGLVDEGQSYFHMMQEQYRIKPNLKHYGCMVDLLGRAGHLNKAYSFIDNM 496

Query: 183 EVEKDEGLWSALLGACRLIGDLSL 254
            V  D  +W ALLGACR+ G++ L
Sbjct: 497 PVRPDASVWGALLGACRIHGNVDL 520


>ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like isoform X1 [Solanum tuberosum]
           gi|565344726|ref|XP_006339455.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g27610-like isoform X2 [Solanum tuberosum]
          Length = 797

 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/86 (53%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   FLSVLYACSHSGLVNEGLRLFSLMQNDYYIRPDVKHYTCMVDLLGRAGKLNEAVKLIDDM 182
           F+ +L+ACSH+GLV++G + F+ M+ DY I+P   HY CM+DLLGRAGK+ EA KL+++M
Sbjct: 529 FIGLLFACSHTGLVDDGKKYFASMKKDYGIKPSPDHYACMIDLLGRAGKIQEAEKLVNEM 588

Query: 183 EVEKDEGLWSALLGACRLIGDLSLAE 260
           ++E D  +W ALL ACR+ G+  LAE
Sbjct: 589 DIEPDATVWKALLAACRVHGNTDLAE 614


Top