BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021199
         (617 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618320.1| Phytoalexin-deficient 4-2 protein [Medicago ...    57   9e-07
gb|ABM55238.1| integrase [Beta vulgaris]                               56   9e-06
gb|ABH08430.1| putative integrase [Beta vulgaris]                      56   9e-06

>ref|XP_003618320.1| Phytoalexin-deficient 4-2 protein [Medicago truncatula]
           gi|355493335|gb|AES74538.1| Phytoalexin-deficient 4-2
           protein [Medicago truncatula]
          Length = 905

 Score = 57.0 bits (136), Expect(2) = 9e-07
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = +3

Query: 60  GLENNKPPFLPIGGKFQH*NDLFTDWMKSNDYQCWRVIEVGE--EKVAEDVIKGTTPWSQ 233
           G  +N+PP    G  +         +++S D   W VI  G+      E +IK  + WS 
Sbjct: 10  GGSSNRPPLFD-GSNYYFWKGKMELFLRSQDNDMWTVITDGDFVPLTKEGIIKVKSAWST 68

Query: 234 DDFIIMEKNSKARMFINNAIGIEDASKLHSCISAEDMWIALEQMYMGSSDLRE 392
           D+   +  NSKAR+F++ A+ +E++ ++  C +A+++W  L+  + G+S ++E
Sbjct: 69  DEKAQVLLNSKARLFLSCALTMEESERVDECKNAKEVWDTLKVHHEGTSHVKE 121



 Score = 21.9 bits (45), Expect(2) = 9e-07
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 413 KDFYNFAMIDGETVSSYQSRFEEITTRLAAHGIDEKEILPKEKIFVIIDGLP 568
           + F  F M + ET+    +RF  I   + + G   K     E+I  I+  LP
Sbjct: 129 RKFEVFEMSENETIDEMYARFTTIVNEMRSLG---KAYSTHERIRKILRCLP 177


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
 Frame = +3

Query: 54  EVGLENNKPPFLPIGGKFQH*NDLFTDWMKSNDYQCWRVIEVGEEKVA------EDVIKG 215
           E G    +PP    G  + +  +    ++K+ +YQ WRVIEVG+ +V       E  +K 
Sbjct: 8   EEGYSTQRPPMFN-GKYYNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKP 66

Query: 216 TTPWSQDDFIIMEKNSKARMFINNAIGIEDASKLHSCISAEDMWIALEQMYMGSSDLR 389
            + + + DF  ME N+ A   ++  +G  + +++  C SA+ +W  LE  + G+++++
Sbjct: 67  LSDYDKSDFEKMEVNAMAIKLLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVK 124


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
 Frame = +3

Query: 54  EVGLENNKPPFLPIGGKFQH*NDLFTDWMKSNDYQCWRVIEVGEEKVA------EDVIKG 215
           E G    +PP    G  + +  +    ++K+ +YQ WRVIEVG+ +V       E  +K 
Sbjct: 8   EEGYSTQRPPMFN-GKYYNYWKNRMEIFIKAENYQVWRVIEVGDFEVTTTNDKNEVTLKP 66

Query: 216 TTPWSQDDFIIMEKNSKARMFINNAIGIEDASKLHSCISAEDMWIALEQMYMGSSDLR 389
            + + + DF  ME N+ A   ++  +G  + +++  C SA+ +W  LE  + G+++++
Sbjct: 67  LSDYDKSDFEKMEVNAMAIKLLHCGLGPHEHNRIMGCKSAKQIWDLLEVTHEGTNEVK 124