BLASTX nr result

ID: Rheum21_contig00021129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021129
         (229 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164396.1| PREDICTED: U-box domain-containing protein 1...    56   4e-06
gb|ADN33842.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]     56   4e-06
ref|XP_004135239.1| PREDICTED: U-box domain-containing protein 1...    56   6e-06

>ref|XP_004164396.1| PREDICTED: U-box domain-containing protein 19-like [Cucumis
           sativus]
          Length = 683

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/71 (39%), Positives = 44/71 (61%)
 Frame = -3

Query: 215 VSFVFLKELQEQISKNXXXXXXXXXXXXVHMVFQRIWFLLEDCTLQDARFLMLVKSSEVA 36
           +   F +ELQ++ S +            +H++FQ+I +LLEDC L+ AR  ML+KS  +A
Sbjct: 64  ILLAFFEELQDR-SSDEFSDLIVLVMSELHLIFQKILYLLEDCALEGARLFMLMKSELIA 122

Query: 35  NRYRVVVRDFA 3
           NR+R++VR  A
Sbjct: 123 NRFRLLVRSVA 133


>gb|ADN33842.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 671

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = -3

Query: 128 HMVFQRIWFLLEDCTLQDARFLMLVKSSEVANRYRVVVRDFA 3
           H++FQ+I +LLEDC L+ AR  ML+KS  +ANR+RV++R  A
Sbjct: 80  HLIFQKILYLLEDCALEGARLFMLMKSEHIANRFRVLIRSVA 121


>ref|XP_004135239.1| PREDICTED: U-box domain-containing protein 19-like [Cucumis
           sativus]
          Length = 683

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -3

Query: 203 FLKELQEQISKNXXXXXXXXXXXXVHMVFQRIWFLLEDCTLQDARFLMLVKSSEVANRYR 24
           F +ELQ++ S +            +H++FQ+I +LLEDC L+ AR  ML+KS  +ANR+R
Sbjct: 68  FFEELQDR-SSDEFSDLIVLVMSELHLIFQKILYLLEDCALEGARLFMLMKSELIANRFR 126

Query: 23  VVVRDFA 3
           ++VR  A
Sbjct: 127 LLVRSVA 133


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