BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021109
         (1120 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   236   1e-59
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   201   4e-49
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...   196   1e-47
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A...   196   2e-47
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   188   4e-45
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A...   184   7e-44
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...   179   2e-42
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...   177   7e-42
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   176   1e-41
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   174   8e-41
gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptas...   172   2e-40
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             170   8e-40
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             170   8e-40
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...   169   1e-39
ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein A...   167   9e-39
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             167   9e-39
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   157   7e-36
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe...   149   2e-33
ref|XP_006582462.1| PREDICTED: putative ribonuclease H protein A...   147   8e-33
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   147   1e-32

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  236 bits (602), Expect = 1e-59
 Identities = 132/369 (35%), Positives = 204/369 (55%), Gaps = 7/369 (1%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            YQ+++D+I  +L  W+ KTLS+ GR TL +S  +S+  Y MQ++ LP+  C+DID+  R 
Sbjct: 771  YQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRS 830

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG     R VHL++W+ I+     GG GIR M  AN A L KLGWRLL +  +LW+R+
Sbjct: 831  FLWGEQEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRI 890

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            LR+KYC NR D+DM   K++AS   RGI     ++ KG   ++GNG++TLFW HRW   +
Sbjct: 891  LRAKYCDNRCDIDMFKEKSNASSTWRGILSSIDVVRKGINSAVGNGAKTLFWHHRWATSE 950

Query: 573  PLLDCATGPISNENLGKTVAELW---RGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQ 403
            PL+  A+     E    TV E+W    G   D     + L       + +  ++D  E+ 
Sbjct: 951  PLISLASPIPPIELQDATVKEMWDLVSGWKVD--VFANYLPEATLKLIAAHELIDDEEAI 1008

Query: 402  DKVF*GVTSSGLFSNKSTINFLRPSQ---VNSPPFDWMLI*KAPVQQRIRHFLHLVVHEG 232
            D ++   + SG F+  S +N  R ++   +++ P  W  + K P  QR+R F+ L + + 
Sbjct: 1009 DDIYWNGSPSGGFTIGSAMNITRNAELANMDAHP-KWSAVWKIPTPQRVRFFIWLAIQDR 1067

Query: 231  FLCNGTRVKRHVSNSTACPRC-RLDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLL 55
             + N  R  R +++   C  C  ++E++ H+LR C   R  W KL G     +    +L 
Sbjct: 1068 LMTNSNRFLRRLTDDPRCLVCGEVEENTDHILRRCPVARILWRKL-GMLGEHNREEINLG 1126

Query: 54   DWL*SNLNA 28
             W+  NL+A
Sbjct: 1127 SWITKNLSA 1135


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  201 bits (511), Expect = 4e-49
 Identities = 129/378 (34%), Positives = 197/378 (52%), Gaps = 11/378 (2%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            +L++++ RL  W+ ++LSL GR TL K+VL+S+ ++VM   LLP    + +D+  R F+W
Sbjct: 631  VLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLW 690

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GS+ E +  HLLSW  I  P + GG G+R     N A +AK+GWRLL D E+LWARV+R 
Sbjct: 691  GSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRK 750

Query: 744  KY-CSNRSDVDMMTAKNHASFI*RGISHG-STLLAKGAQISIGNGSRTLFWLHRWVGDKP 571
            KY      D   +  +   S   R ++ G   ++ KG     G+G    FWL RW+  +P
Sbjct: 751  KYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRWLLQEP 810

Query: 570  LLDCATGPISNENLGKTVAELW-RGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKV 394
            L++  T  I      K  A+ W  G   +   L   L   ++ +L S+ V   + + D++
Sbjct: 811  LVELGTDMIPEGERIKVAADYWLPGSGWNLEILGLYLPETVKRRLLSVVVQVFLGNGDEI 870

Query: 393  F*GVTSSGLFSNKSTINFLRPSQVNSPPFD------WMLI*KAPVQQRIRHFLHLVVHEG 232
                T  G F+ +S  + L+    + P         W LI      +R+R F+ LV    
Sbjct: 871  SWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLI----TPERVRVFIWLVSQNV 926

Query: 231  FLCNGTRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLL 55
             + N  RV+RH+S +  C  C   +E+ LHVLRDC  +   W +L     +  FFS SLL
Sbjct: 927  IMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLL 986

Query: 54   DWL*SNLN-AQDRWSTLF 4
            +WL +N++  +  W TLF
Sbjct: 987  EWLFTNMDPVKGIWPTLF 1004


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score =  196 bits (499), Expect = 1e-47
 Identities = 123/378 (32%), Positives = 195/378 (51%), Gaps = 11/378 (2%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            IL+++++R+  W+ KTLS  GR TL K+VL+S+ ++ M T LLP+ + N +D++ R F+W
Sbjct: 16   ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GS+AE +  HL+ W  +  P   GG G+R  +  N A ++K+GWRLL +  +LW  VL+ 
Sbjct: 76   GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135

Query: 744  KY-CSNRSDVDMMTAKNHASFI*RGISHG-STLLAKGAQISIGNGSRTLFWLHRWVGDKP 571
            KY      D   +  K   S   R I+ G   +++ G     G+G +  FW  RWV  KP
Sbjct: 136  KYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKP 195

Query: 570  LLDCATGPISNENLGKTVAELW-RGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKV 394
            LL+   G    +       +LW  G   D   +    T++ R +L ++ +     ++D++
Sbjct: 196  LLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRL 255

Query: 393  F*GVTSSGLFSNKSTINFLRPSQVNSPPFD--WMLI*KAPVQQRIRHFLHLVVHEGFLCN 220
                +  G FS +S    L   +V  P     +  + K  V +R++ FL LV ++  +  
Sbjct: 256  SWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTE 315

Query: 219  GTRVKRHVSNSTACPRCRLD-ESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDWL* 43
              R +RH+S S  C  C+   ES LHVLRDC      W+++  +     FFS SL +WL 
Sbjct: 316  EERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLY 375

Query: 42   SNLNAQD-----RWSTLF 4
             NL  +       WST+F
Sbjct: 376  DNLGDRSGCEDIPWSTIF 393


>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 491

 Score =  196 bits (497), Expect = 2e-47
 Identities = 125/384 (32%), Positives = 189/384 (49%), Gaps = 14/384 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            Y  I+DK+  RL  W A  LSL GR TL +SVL ++ +Y MQTS +P GV N I+++ +R
Sbjct: 4    YHDIVDKVEKRLSGWNASQLSLAGRITLPQSVLQAIPVYTMQTSEIPAGVINKINQICKR 63

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            FIW  S E+R + L+ WD +  P   GG G++ + + N A + KL W L+++  +LW RV
Sbjct: 64   FIWSGSNENRKMSLIGWDKVCQPKLCGGLGLKNLGMMNKALMMKLAWGLVSEPTSLWCRV 123

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWV-GD 577
            L +KY    SD  +       S + + I    +   KG Q +I NG R  FWL  WV   
Sbjct: 124  LYTKYGVADSDFPLGLPTRSGSHLWKSIGKVWSDTLKGLQWNIVNGRRVRFWLDCWVTKH 183

Query: 576  KPLLDCATGPISNENLGKTVAEL------WRGDTCD*NALQDLLTSDLRAKLHSLCVVDR 415
            KPL   A  PI  E+L   + +       WR D     + + LL + +  ++ ++     
Sbjct: 184  KPLSSYALAPIPVESLMNLIVDFVDANGNWRWD-----SFEHLLPNCIILRIAAVQPPME 238

Query: 414  VESQDKVF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHE 235
             +  DK F   +  G FS KS    +  +++      W +  K     R++ F+ L +H+
Sbjct: 239  GKGDDKFFWANSQRGDFSVKSAYMAITKNEIGIEHSRWNIAWKWKGPPRVQTFIWLALHD 298

Query: 234  GFLCNGTRVKRHVSNSTACPRCRL-DESSLHVLRDCSFVREAWLKLGGKAANPSFFSASL 58
                     +RH+     C  C +  E++LHVLRDC   +  W +L        FFS++L
Sbjct: 299  RLKTKAEIGRRHIHIDWTCDHCGVASETTLHVLRDCFMAKRLWNQLLPSEWRQVFFSSNL 358

Query: 57   LDWL*SNLNAQD------RWSTLF 4
            LDWL  NL +         WS +F
Sbjct: 359  LDWLTLNLRSNQCMENGLEWSCMF 382


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 732

 Score =  188 bits (477), Expect = 4e-45
 Identities = 121/349 (34%), Positives = 181/349 (51%), Gaps = 8/349 (2%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            IL+K+  RL  W+ + LSL GR TL K+VL+S+ ++ M T  LPK   + +DK+ R F+W
Sbjct: 293  ILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLW 352

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GSS   R  HL+SW  +  P S GG GIR  +  N A L+K+GWRL+ D  +LWAR++R 
Sbjct: 353  GSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRC 412

Query: 744  KY-CSNRSDVDMMTAKNHASFI*RGISHG-STLLAKGAQISIGNGSRTLFWLHRWVGDKP 571
             Y   +  D      ++  S   R ++ G   ++  G    IG+G   LFW+ +W+ + P
Sbjct: 413  NYRVQDVRDGAWTKVRSVCSSTWRSVALGMREVVIPGLSWVIGDGREILFWMDKWLTNIP 472

Query: 570  LLDCATGPISNENLGKTVAELWR-GDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKV 394
            L +           G    +L R G   D   +   ++S  R +L S  + D   ++D++
Sbjct: 473  LAELLVQEPPAGWKGMRARDLRRNGIGWDMATIAPYISSYNRLQLQSFVLDDITGARDRI 532

Query: 393  F*GVTSSGLFSNKSTINFL----RPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFL 226
              G +  G F   +T +FL     P Q     FD +    AP  +R+R FL LV  +  +
Sbjct: 533  SWGESQDGRFKVSTTYSFLTRDEAPRQDMKRFFDRVWSVTAP--ERVRLFLWLVAQQAIM 590

Query: 225  CNGTRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAAN 82
             N  R +RH+S +T C  C+   ES +HVLRDC  +   WL+L    AN
Sbjct: 591  TNQERHRRHLSTTTICQVCKGAKESIIHVLRDCPAMEGIWLRLISDLAN 639


>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 407

 Score =  184 bits (466), Expect = 7e-44
 Identities = 118/378 (31%), Positives = 180/378 (47%), Gaps = 8/378 (2%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            Y  I D++ +RL +W++K LS+ GR TL +SV +++  Y MQT+  P  +C ++DK+ R 
Sbjct: 28   YDGIFDQVQSRLSSWKSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRN 87

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG +   + VHL++WD++  P   G  GI+  E  N A LAK+ WR+    + LWA +
Sbjct: 88   FLWGDTEIKKKVHLVNWDVVCQPKQLGDIGIKKTEDMNQAMLAKISWRMFQCDKGLWASM 147

Query: 753  LRSKYCSNRSDV-DMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGD 577
               KY  N     D        S   RGI  G+ LL    +  +G+G    FW   W   
Sbjct: 148  FAEKYLKNCCLFDDNYEVAVDCSSTWRGIIFGAKLLRSNLKWRLGDGKSIKFWHDYWFPA 207

Query: 576  KPLLDCATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDK 397
             PL++ A  P +  N   TV + W  D  D + L D++  ++  K+ ++ +   V   D 
Sbjct: 208  GPLINFAL-PSAFINHAATVCDFWIEDGWDVHKLLDVVPFEIVNKIVNVPIDFGVSGSDT 266

Query: 396  VF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLCNG 217
            +  G T++G F  KS  N L        P  W  I +  +  +++ FL   +H+  L N 
Sbjct: 267  LIWGATANGKFFVKSAYNSLFDMSAPLNP-QWNYIWRMKIPPKLKTFLWTFLHKKLLTNM 325

Query: 216  TRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDWL*S 40
             RV R  + S  CP C+  DES LH+ RDC      W       +    FS     W+ +
Sbjct: 326  QRVTRGFTASALCPICQSADESFLHLFRDCPRSVLIWNAFVKPGSISQSFSLDWNGWIQA 385

Query: 39   NLNAQD------RWSTLF 4
             L+         RW  LF
Sbjct: 386  QLHCHSFTSNNIRWCDLF 403


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score =  179 bits (453), Expect = 2e-42
 Identities = 114/363 (31%), Positives = 185/363 (50%), Gaps = 6/363 (1%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            IL ++++RL  W+ + LSL GR TL KSVL+S+ ++ M T  LPK   +  D++ + F+W
Sbjct: 223  ILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATLDGFDRISKSFVW 282

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GSS E +  HLL+W+ I      GG GIR     N A LAK+GWRLL D  +LWARV+  
Sbjct: 283  GSSTEKKKQHLLAWNKIYCTKQAGGLGIRSSRAMNTALLAKIGWRLLQDKSSLWARVI-- 340

Query: 744  KYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDKPLL 565
                      M+  +               ++  G    +G+G  T FW  +W+ + PL 
Sbjct: 341  ----------MLGMRE--------------VVIPGVSWVVGDGQTTRFWADKWLMNTPLR 376

Query: 564  DCATGPISNENLGKTVAELWR-GDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKVF* 388
            +   GP         V +LW+ G       +   +  D+R +L ++ V +    +D++  
Sbjct: 377  EDIIGPAPVGLEEARVCDLWQHGRGWLLENIAPYVAPDIRLRLKAVVVDNITGVRDRLSW 436

Query: 387  GVTSSGLFSNKSTINFLRPSQVNSPPFD----WMLI*KAPVQQRIRHFLHLVVHEGFLCN 220
            G +  G F+ KS  + L     N+P  D    +  + K    +R++ FL L VH+  + N
Sbjct: 437  GESLDGKFTVKSAYSSLMKD--NTPRSDLSRMYDRVWKVIAPERVKIFLWLGVHQVIMTN 494

Query: 219  GTRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDWL* 43
              R +RH+S++  C  C+  DE+ +H+LRDC  +   W ++  +    +FF+ +LL+W+ 
Sbjct: 495  MERQRRHLSDTGICQVCKGGDETIIHILRDCPAMYGIWTRIIPRRKRGTFFTQTLLEWVY 554

Query: 42   SNL 34
             NL
Sbjct: 555  DNL 557


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
            putative protein [Arabidopsis thaliana]
          Length = 947

 Score =  177 bits (449), Expect = 7e-42
 Identities = 114/380 (30%), Positives = 190/380 (50%), Gaps = 13/380 (3%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            +L+++++RL  W+ ++LS  GR TL KSVL+ + ++ M T  LP+     +DK+ R F+ 
Sbjct: 445  VLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLL 504

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GSSAE + +HL++WD +  P S GG GIR  +  N A ++K+GWRL+ D  +LWAR+LRS
Sbjct: 505  GSSAEKKKLHLVAWDRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRS 564

Query: 744  KYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDKPLL 565
            KY     +V                      +++G++  +GNG   LFW   W+  + L+
Sbjct: 565  KYRVGLREV----------------------VSRGSRWVVGNGRDILFWSDNWLSHEALI 602

Query: 564  DCATGPISNENLGKTVAELW-RGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKVF* 388
            + A   I N      V +LW  G     + ++  ++   R +L ++ V     ++D++  
Sbjct: 603  NRAVIEIPNSEKELRVKDLWANGLGWKLDKIEPYISYHTRLELAAVVVDSVTGARDRLSW 662

Query: 387  GVTSSGLFSNKSTINFLRPSQVNSPP----FD--WMLI*KAPVQQRIRHFLHLVVHEGFL 226
            G ++ G+F+ KS    L       P     FD  W ++      +R++ FL         
Sbjct: 663  GYSADGVFTVKSAYRLLTEDHDPRPNMAAFFDRLWRVV----ALERVKTFLW-------- 710

Query: 225  CNGTRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDW 49
                    H+ +++ C  C+  DE+ LHVL+DC  +   W +L     +  FF+ SL  W
Sbjct: 711  --------HIGDTSVCQVCKGGDETILHVLKDCPSIAGIWRRLVQVQRSYDFFNGSLFGW 762

Query: 48   L*SNLNAQD-----RWSTLF 4
            L  NL  ++      W+TLF
Sbjct: 763  LYVNLGMKNAETGYAWATLF 782


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score =  176 bits (447), Expect = 1e-41
 Identities = 117/378 (30%), Positives = 184/378 (48%), Gaps = 7/378 (1%)
 Frame = -2

Query: 1116 YYQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVR 937
            ++  I++KI N+L  W+ + LSL GR TL+K V++S+  Y MQ + +PK +C++I+K+ R
Sbjct: 194  HFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQR 253

Query: 936  RFIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWAR 757
             F+WG S + R  HL+SWD+   P   GG G +     N A L K+ W L+   + LW R
Sbjct: 254  GFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCR 313

Query: 756  VLRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGD 577
            VL SKY  N    + ++++ + S + + I        +     IG+G  T FWL +W+ +
Sbjct: 314  VLYSKYGRNNDLNNNISSQPYDSPLWKAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISN 373

Query: 576  KPLLDCATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDK 397
               L  ++     +        +      D N L D L  D+  ++ +L      +  D 
Sbjct: 374  NTSLFSSSTQSYVDTTISVRDAINTSGVWDLNFLMDNLHVDIVNQILALPTPSDFDGPDT 433

Query: 396  VF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLCNG 217
            +  G T++  F+ +S  N L+     +   DW  +       RI+ F+ L  H   L N 
Sbjct: 434  IGWGGTNTLKFTVQSAYN-LQQENPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNY 492

Query: 216  TRVKRHVSNSTACPRC-RLDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDWL*S 40
             R K  V  S  CP C R DE+ +HVLRDC    + WL+L       +FFS    +W+ +
Sbjct: 493  RRSKWGVGISPTCPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFN 552

Query: 39   NLNAQD------RWSTLF 4
            NLN +        W T F
Sbjct: 553  NLNKKGIGDNPATWQTTF 570


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  174 bits (440), Expect = 8e-41
 Identities = 116/375 (30%), Positives = 176/375 (46%), Gaps = 5/375 (1%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            Y  +L+K+ + +  WQAK L++ GR TL KSV++S  +Y MQ+SLLP  V N+I+K  R+
Sbjct: 768  YDGLLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRK 827

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+W    +   +  +SWD I  P   GG G R +   N A +AKLGW ++ D   LW R+
Sbjct: 828  FLWNKMDKSHYLARMSWDRICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRI 887

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            L+++Y    S +  +  KNH S I R I  G  LL KG    IGNG  T  W H WVG  
Sbjct: 888  LKARYWERGSFLSAV-GKNHHSPIWRDIVKGRELLEKGLVRRIGNGRSTSLWYHWWVGGG 946

Query: 573  PLLDCATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKV 394
            PL+D     I        V+ + +    D   +  LL  D+  ++  + +    E +D  
Sbjct: 947  PLVDVMGSNIPEFMSHWQVSNIIKRGRWDTKKISHLLPPDILKQIKEIPLASMSEVEDDF 1006

Query: 393  F*GVTSSGLFSNKSTINFL-RPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLCNG 217
                  +G FS KS    + R  +       W  + +  +  + +  +   +H       
Sbjct: 1007 TWNFEKNGTFSVKSAYYLINRREEETGGKGSWRGLWRKNIPFKYKLLIWNGIHNILPTAL 1066

Query: 216  TRVKRHVSNSTACPRC-RLDESSLHVLRDCSFVREAWLKL--GGKAANPS-FFSASLLDW 49
               KR  + +  C  C    E  +H+ RDC      W+++    K  N + FF+    +W
Sbjct: 1067 FLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVWIEILKHHKPNNQNLFFNLEWEEW 1126

Query: 48   L*SNLNAQDRWSTLF 4
            +  NLN  D W T F
Sbjct: 1127 IDFNLNQHDYWVTKF 1141


>gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptase), Polynucleotidyl
            transferase, Ribonuclease H fold-like protein [Theobroma
            cacao]
          Length = 616

 Score =  172 bits (436), Expect = 2e-40
 Identities = 118/373 (31%), Positives = 183/373 (49%), Gaps = 13/373 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            ++F+ DK+ ++L  W+A +LS  G  TL KSVL+++  YVMQ   +P   C  +++  + 
Sbjct: 66   FKFLEDKVRSKLSGWKAFSLSFAGILTLVKSVLSTIPYYVMQIVSIPLDSCKRMERYCQN 125

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG  A+H+ +HL+  + I  P      G++ + V N+A L KL W+L+T  ++LW  +
Sbjct: 126  FLWGGDADHKRIHLIRCNQICRPKEERSLGVKRLHVMNNAFLMKLLWQLVTRPKSLWVSI 185

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAK-------GAQISIGNGSRTLFWL 595
            +R KY  N         +  +S    G SH    L+K         +  +G+G    FW 
Sbjct: 186  IRGKYNFNMD-------RRSSSIYCHGASHTWNALSKLWNVFNNNLRWVLGDGLSIRFWK 238

Query: 594  HRWVGDKPLLD--CATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVV 421
              W+ D PLL+       +++EN       L  G+  +   L   L SDL  K+      
Sbjct: 239  DIWLEDTPLLEQGHTLNIVTSENCCVREFLLDTGE-WNHEKLATCLHSDLVNKILMFLPP 297

Query: 420  DRVESQDKVF*GVTSSGLFSNKSTINFLR---PSQVNSPPFDWMLI*KAPVQQRIRHFLH 250
                  D  +   ++SG+ +  ST   LR   P+ +      W +  K    QRIR FL 
Sbjct: 298  LLSFKPDTPYWASSASGVCTVASTYEVLREDYPNYIGQQSRKWAIAWKWDGPQRIRTFLM 357

Query: 249  LVVHEGFLCNGTRVKRHVSNSTACPRCRL-DESSLHVLRDCSFVREAWLKLGGKAANPSF 73
              +H   L N    +R++S+S  C  C + DES LH+LRDC   +E WLKLG +    +F
Sbjct: 358  QCLHGKLLTNLECRRRNMSSSATCALCSVSDESVLHLLRDCPHSKEVWLKLGSRMGYGNF 417

Query: 72   FSASLLDWL*SNL 34
            F   L DWL +NL
Sbjct: 418  FDLLLSDWLLTNL 430


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  170 bits (431), Expect = 8e-40
 Identities = 105/385 (27%), Positives = 192/385 (49%), Gaps = 15/385 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            +  ++DK+  +L +W+A +L++ GR  L ++ L ++  Y MQ   LP   CN+IDK  R 
Sbjct: 769  FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG     R +H ++W  I  P + GG G+R     N A L K+ W++ ++ + LW +V
Sbjct: 829  FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            LR KY  N +D   + ++++ S+  R I  G  +LA   + ++GNG +  FW   WVGD 
Sbjct: 889  LREKYVKN-ADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDG 947

Query: 573  PL---LDCATGP-ISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVES 406
            PL    DC   P +++  +   +    R DT    AL ++L +++   + +  +    E 
Sbjct: 948  PLASNTDCINQPHMTDIKVEDLITSQRRWDT---GALHNILPTNMIDMVRATPIAINSEQ 1004

Query: 405  QDKVF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFL 226
            +D +    +++G+ +  S  + +     +    DW  I +A   ++I+ F+  +V  G +
Sbjct: 1005 EDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLM 1062

Query: 225  CNGTRVKRHVSNSTACPRCRLDESSL-HVLRDCSFVREAWLKLGGKAANPSFFSAS---- 61
             N  R +R ++++ +CP C  ++ +L H+ R C      W      A  P  F  S    
Sbjct: 1063 VNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW----DSAVPPLTFQTSNHLH 1118

Query: 60   LLDWL*SNLNAQDR------WSTLF 4
            +  W+ +  ++Q +      WS +F
Sbjct: 1119 MHSWMKAACSSQQKDGYGTNWSLIF 1143


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  170 bits (431), Expect = 8e-40
 Identities = 105/385 (27%), Positives = 192/385 (49%), Gaps = 15/385 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            +  ++DK+  +L +W+A +L++ GR  L ++ L ++  Y MQ   LP   CN+IDK  R 
Sbjct: 769  FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 828

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG     R +H ++W  I  P + GG G+R     N A L K+ W++ ++ + LW +V
Sbjct: 829  FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 888

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            LR KY  N +D   + ++++ S+  R I  G  +LA   + ++GNG +  FW   WVGD 
Sbjct: 889  LREKYVKN-ADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDG 947

Query: 573  PL---LDCATGP-ISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVES 406
            PL    DC   P +++  +   +    R DT    AL ++L +++   + +  +    E 
Sbjct: 948  PLASNTDCINQPHMTDIKVEDLITSQRRWDT---GALHNILPTNMIDMVRATPIAINSEQ 1004

Query: 405  QDKVF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFL 226
            +D +    +++G+ +  S  + +     +    DW  I +A   ++I+ F+  +V  G +
Sbjct: 1005 EDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDW--IWRATCTEKIKLFMWKIVKNGLM 1062

Query: 225  CNGTRVKRHVSNSTACPRCRLDESSL-HVLRDCSFVREAWLKLGGKAANPSFFSAS---- 61
             N  R +R ++++ +CP C  ++ +L H+ R C      W      A  P  F  S    
Sbjct: 1063 VNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW----DSAVPPLTFQTSNHLH 1118

Query: 60   LLDWL*SNLNAQDR------WSTLF 4
            +  W+ +  ++Q +      WS +F
Sbjct: 1119 MHSWMKAACSSQQKDGYSTNWSLIF 1143


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 719

 Score =  169 bits (429), Expect = 1e-39
 Identities = 111/348 (31%), Positives = 166/348 (47%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1080 LRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIWGSSAEHRN 901
            L  W +KTLS+ GR TL +SV  S+ +Y MQT+ LP  +C  IDK    F+WG S E + 
Sbjct: 327  LSGWSSKTLSMAGRLTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKK 386

Query: 900  VHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRSKY---CSN 730
            +HL++W+ +  P   GG G++     N A LAK  WR+  +   LWA + R KY   C  
Sbjct: 387  IHLVNWESVCKPKHRGGLGLKKTADMNQAMLAKASWRIFQNDHGLWADIYRKKYLQDCCI 446

Query: 729  RSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDKPLLDCATG 550
             S   +  A    S   RGI HG  L+ +  +  IG+G++  FW                
Sbjct: 447  ESSNSIAPA--DCSNTWRGIVHGVELMRRNLKWRIGDGAKIKFW---------------- 488

Query: 549  PISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKVF*GVTSSG 370
                     T+ E W   + + + L+ +L   +  ++ S+     V   DK+    T++G
Sbjct: 489  -------NATIKEFWCDTSWNISLLKSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANG 541

Query: 369  LFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLCNGTRVKRHVSN 190
             FS KST N    S   S P  W  + K     +++ F+  V+H+  L N  RV+R  S 
Sbjct: 542  KFSVKSTYNSFFDSAGVSNPL-WTHLWKLNCPPKLKTFMWSVLHQKILTNVQRVRRGFST 600

Query: 189  STACPRCR-LDESSLHVLRDCSFVREAWLKLGGKAANPSFFSASLLDW 49
              +CP C+  DE+ LH+LRDC   +  W  +    +  + FS   LDW
Sbjct: 601  IASCPICKNADETLLHLLRDCPRSQAIWNSILRPGSITNSFS---LDW 645


>ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 360

 Score =  167 bits (422), Expect = 9e-39
 Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 3/341 (0%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            YQ ILDK+   L  W A  LSL GR TL +SV+ ++ +Y MQT+ +P G+   ID+  RR
Sbjct: 13   YQGILDKVNQHLLRWNAIHLSLAGRITLTQSVIQAIPIYAMQTTKIPFGIREKIDQACRR 72

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            FIW  +A+ + + L+ WD I      GG G++ + + N A L K+GW L+    +LW +V
Sbjct: 73   FIWSGAADKKKISLVKWDTICQLKPSGGLGLKQLNLMNDALLMKIGWVLIASPNSLWVKV 132

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            L SKY    + +         S++ + +      + KG +  IGNG+R  FW   WV ++
Sbjct: 133  LLSKYGLAPNALPSTLPTKCGSYMWKAVGGIWHEVLKGIKWDIGNGNRVRFWWDNWVTEE 192

Query: 573  -PLLDCATGPISNENLGKTVAELWRGD-TCD*NALQDLLTSDLRAKLHSLCVVDRVESQD 400
             PL   A  PI  + L + VA     + T +    ++L    L  K+ +       +  D
Sbjct: 193  YPLYTFALQPIRLQQLEECVARFITVEGTWNWRLFENLFPHHLLLKIAATKPPSVNDEDD 252

Query: 399  KVF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLCN 220
             ++   + S  F+  S    L   +V++    W ++ +    QRI+ FL +V        
Sbjct: 253  YMYWAYSKSEDFTTNSAYRALSKMEVHNEESFWRILWQWRGPQRIKTFLWVVGQNRLKTK 312

Query: 219  GTRVKRHVSNSTACPRCR-LDESSLHVLRDCSFVREAWLKL 100
                +RH+ +  +C +C  + E++LHVLRDC   +  W  L
Sbjct: 313  AELFRRHIVDDMSCAKCGCVVENTLHVLRDCPSAKHVWSSL 353


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  167 bits (422), Expect = 9e-39
 Identities = 108/388 (27%), Positives = 189/388 (48%), Gaps = 18/388 (4%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            +  ++DK+  +L +W+A +L++ GR  L ++ L ++  Y MQ   LP   CN+IDK  R 
Sbjct: 1301 FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 1360

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F+WG     R +H ++W  I  P + GG G+R     N A L K+ W++ ++ + LW +V
Sbjct: 1361 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 1420

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            LR KY  N +D   + ++++ S+  R I  G  +LA   + ++GNG +  FW   WVGD 
Sbjct: 1421 LREKYVKN-ADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDG 1479

Query: 573  PL---LDCATGP----ISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDR 415
            PL    DC   P    I  E+L  T    W     D  AL ++L  ++   + +  +   
Sbjct: 1480 PLASNTDCINQPHMTDIKVEDL-TTSQRRW-----DTGALHNILPINMIDMVRATPIAIN 1533

Query: 414  VESQDKVF*GVTSSGLFSNKSTINFLRPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHE 235
             E +D      +++G+ +  S  + +     +    DW  I +A   ++I+ F+  +V  
Sbjct: 1534 SEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHDW--IWRATCTEKIKLFMWKIVKN 1591

Query: 234  GFLCNGTRVKRHVSNSTACPRCRLDESSL-HVLRDCSFVREAWLKLGGKAANPSFFSAS- 61
            G + N  R +R ++++ +CP C  ++ +L H+ R C      W      A  P  F  S 
Sbjct: 1592 GLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLAEACW----DSAVPPLTFQTSN 1647

Query: 60   ---LLDWL*SNLNAQDR------WSTLF 4
               +  W+ +  ++Q +      WS +F
Sbjct: 1648 HLHMHSWMKAACSSQQKDGYGTNWSLIF 1675


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268307|emb|CAB78601.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 929

 Score =  157 bits (397), Expect = 7e-36
 Identities = 106/318 (33%), Positives = 164/318 (51%), Gaps = 7/318 (2%)
 Frame = -2

Query: 1104 ILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRRFIW 925
            +L+++++RL  W++++LSL GR TL K+VL S+ ++ M + LLP  +   +DK+ R F+W
Sbjct: 566  VLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLW 625

Query: 924  GSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARVLRS 745
            GS+ E R  HLLSW  +  P + GG G+R  +  N A LAK+GWRLL D  +LWARVLR 
Sbjct: 626  GSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARVLRR 685

Query: 744  KYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDKPLL 565
            KY         +T  + +S++    +  ST  + G  +  G           W+  +PL 
Sbjct: 686  KY--------KVTDVHDSSWLVPKATWSSTWRSIGVGLREGVAK-------GWILHEPLC 730

Query: 564  DCATGPISNENLGKTVAELW-RGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDKVF* 388
              AT  +S E L   V E W  G   D   L   L   +  +LH++ +   +  +D++  
Sbjct: 731  TRATCLLSPEELNARVEEFWTEGVGWDMVKLGQCLPRSVTDRLHAVVIKGVLGLRDRISW 790

Query: 387  GVTSSGLFSNKSTINFLRPSQVNSPPFD------WMLI*KAPVQQRIRHFLHLVVHEGFL 226
              TS G F+  S    L   + + P  +      W +I  AP  +R+R FL LV  +  +
Sbjct: 791  QGTSDGDFTVGSAYVLLTQEEESKPCMESFFKRIWGVI--AP--ERVRVFLWLVGQQVIM 846

Query: 225  CNGTRVKRHVSNSTACPR 172
             N  RV+RH+ +   C R
Sbjct: 847  TNVERVRRHIGDIEVCQR 864


>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score =  149 bits (377), Expect = 2e-33
 Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 13/349 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            +  + +++  +L+ W+ K LS  G+E L K V  ++ +Y M   LLPK VC D++K+V +
Sbjct: 658  FNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSYFLLPKYVCEDLNKLVAQ 717

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F W SS E++ +H ++WD +  P   GG G R +   N A LAK GWRLL + ++L  +V
Sbjct: 718  FWWNSSTENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLITKV 777

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            L++KY   RS ++   +  HAS + + +    T++ +G++  +G+G     W  RW+  +
Sbjct: 778  LKAKYFPTRSFLETAVSL-HASVVWKSLYEARTVIIQGSRWQVGSGDTIGIWEDRWL-PQ 835

Query: 573  PLLDCATGPISNENLGKTVAELWRGDTCD*NA--LQDLLTSDLRAKLHSLCVVDRVESQD 400
            P       P    +    V++L  GD+ + N   LQ++   +    + S+ +  R+ + D
Sbjct: 836  PNSFRIFFPKPEHSAITKVSDLIHGDSREWNVPLLQNVFFPEEVMLIRSIPLSLRL-TPD 894

Query: 399  KVF*GVTSSGLFSNKSTINFLR----------PSQVNSPPFDWMLI*KAPVQQRIRHFLH 250
             +       G+F+ KS  +  R           S  ++   +W L+ KA V  R++ F  
Sbjct: 895  MLVWHYDKKGMFTVKSAYHVARSVHSSTGRASSSNSDAVARNWSLLWKAIVPARVKTFWW 954

Query: 249  LVVHEGFLCNGTRVKRHVSNSTACPRCRLD-ESSLHVLRDCSFVREAWL 106
             V+           ++ VS    C  C    ESS+H+L DC F   AW+
Sbjct: 955  RVISGILPTKANLARKKVSLDEECMLCEGPVESSIHILCDCPFAICAWI 1003


>ref|XP_006582462.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
            max]
          Length = 779

 Score =  147 bits (371), Expect = 8e-33
 Identities = 91/301 (30%), Positives = 156/301 (51%), Gaps = 2/301 (0%)
 Frame = -2

Query: 1116 YYQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVR 937
            Y+ FI+DKI  +L  W+ K L+  GR TLA SV++++  YVM     P+G+C+ ID+ VR
Sbjct: 364  YFSFIIDKIQGKLAGWKQKLLNRAGRVTLANSVISAIPTYVMHNCWRPEGICDQIDQTVR 423

Query: 936  RFIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWAR 757
             FIWGSS      H + W+ IT   + GG G+R    AN + L K  W ++ + + LW +
Sbjct: 424  GFIWGSSTS----HWVPWETITQSRARGGLGVRKAREANISLLGKHIWEVIHNPDKLWVK 479

Query: 756  VLRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGD 577
            ++ +KY ++ S V  M+ +  A+F    I   +  L  G  I IG G  +L W  +W+ +
Sbjct: 480  LMTNKYLNHNSIVQSMSPRG-ATFTWSSILKATDFLKDGFFIRIGRGDVSL-WYGKWLLE 537

Query: 576  KPLLDCATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVESQDK 397
              L       ++ ++    V +LW   + + + L  +L +D++  + S+ + D V+  D 
Sbjct: 538  GYLCSKVL-YVNYQDTHLRVKDLWNNGSWNFSMLATILPNDMKQHIRSIRINDIVD--DI 594

Query: 396  VF*GVTSSGLFSNKSTINFL--RPSQVNSPPFDWMLI*KAPVQQRIRHFLHLVVHEGFLC 223
            +    ++ G++S  S   +L   PS +++    W  +    + + IR FL L +HE    
Sbjct: 595  IIWAPSADGIYSASSVYKWLTSTPSTIDTSEVSWTWLWSLNIPENIRFFLWLSLHESLPT 654

Query: 222  N 220
            N
Sbjct: 655  N 655


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  147 bits (370), Expect = 1e-32
 Identities = 110/385 (28%), Positives = 175/385 (45%), Gaps = 15/385 (3%)
 Frame = -2

Query: 1113 YQFILDKIANRLRNWQAKTLSLVGRETLAKSVLTSLSLYVMQTSLLPKGVCNDIDKMVRR 934
            +Q I D++  +L+ W+ K LS  GRE L K+V  ++  Y MQ  ++PK + + I+KM R 
Sbjct: 774  FQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRN 833

Query: 933  FIWGSSAEHRNVHLLSWDIIT*PPSYGGFGIRPMEVANHANLAKLGWRLLTDTEALWARV 754
            F WG   E R V  ++W+ +  P   GG GIR  +V N A LAK  WR+LT  ++L ARV
Sbjct: 834  FFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARV 893

Query: 753  LRSKYCSNRSDVDMMTAKNHASFI*RGISHGSTLLAKGAQISIGNGSRTLFWLHRWVGDK 574
            ++ KY    + ++   + N  SF  + I     ++ KG    IG+G  T  W   WV   
Sbjct: 894  IKGKYFPRSNFLEARVSPN-MSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGDPWV--- 949

Query: 573  PLLD----CATGPISNENLGKTVAELWRGDTCD*NALQDLLTSDLRAKLHSLCVVDRVES 406
            P L+     AT  +S ++  + V EL   D  +   L  L        +  + V  + + 
Sbjct: 950  PSLERYSIAATEGVSEDDGPQKVCELISNDRWNVELLNTLFQPWESTAIQRIPVALQ-KK 1008

Query: 405  QDKVF*GVTSSGLFSNKSTI-------NFLRPSQVNSPPFD-WMLI*KAPVQQRIRHFLH 250
             D+    ++ +G F+ +S             PS    P    W  I KA +  +++ F  
Sbjct: 1009 PDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSW 1068

Query: 249  LVVHEGFLCNGTRVKRHVSNSTACPRC-RLDESSLHVLRDCSFVREAWLKLGGKAANPSF 73
              +H G        KR ++   ACPRC   +E++ H++  C     AW     +    + 
Sbjct: 1069 KAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNI 1128

Query: 72   FSASLLDWL*SNLNA--QDRWSTLF 4
             + S   W+ S L+      W  LF
Sbjct: 1129 EAGSFRIWVESLLDTHKDTEWWALF 1153