BLASTX nr result
ID: Rheum21_contig00021088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00021088
(245 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 100 3e-19
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 93 3e-17
ref|XP_006577683.1| PREDICTED: uncharacterized protein LOC102661... 90 4e-16
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 89 8e-16
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 88 1e-15
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 87 2e-15
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 86 5e-15
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera] 86 7e-15
ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628... 85 9e-15
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 85 9e-15
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera] 84 1e-14
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 84 1e-14
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 82 7e-14
emb|CAN67169.1| hypothetical protein VITISV_017676 [Vitis vinifera] 81 2e-13
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera] 78 1e-12
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] 77 2e-12
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 77 2e-12
emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera] 76 5e-12
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 75 7e-12
ref|XP_006477890.1| PREDICTED: uncharacterized protein LOC102616... 74 2e-11
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/81 (61%), Positives = 63/81 (77%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
L D+E+ D + VFMGNSA + V+GKGKV LKLTSGK+L L N LYVPS+RRNL+S L
Sbjct: 351 LLHDYEDTVDGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSL 410
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ AG+K V+E K+VL+KNG
Sbjct: 411 LNRAGLKIVLEGDKVVLTKNG 431
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE A++ +++FMGNSA S++ G+GKV LK+TSGK L L N LYVP +R+NL+S L
Sbjct: 341 LFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVPEIRKNLVSGSL 400
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V ES +VLSKNG
Sbjct: 401 LNKHGFRMVFESDMVVLSKNG 421
>ref|XP_006577683.1| PREDICTED: uncharacterized protein LOC102661346 [Glycine max]
Length = 362
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF E+A D VFMGNSA ++VLGKGK+ LKLTSGK+L L + LYVPS+RRNLIS
Sbjct: 258 LFHQIEDADDGKCVFMGNSATTRVLGKGKILLKLTSGKTLSLSDVLYVPSLRRNLISGSC 317
Query: 181 LDVAGIKQVIESGKLVLSK 237
L+ AG+K V E+ K+V+++
Sbjct: 318 LNRAGLKLVFEADKVVITE 336
>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
vinifera]
Length = 478
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/81 (53%), Positives = 60/81 (74%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
+F+ FE + ++VFMGNSA S++ G+GKV LK+TSGK L L N LYVP +R+NL+S L
Sbjct: 352 MFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSL 411
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V +S K+VLSK+G
Sbjct: 412 LNNHGFRLVFDSNKVVLSKSG 432
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 87.8 bits (216), Expect = 1e-15
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
+F+ FE + ++VFMGNS S++ G+GKV LK+TSGK L L N LYVP +R+NL+S L
Sbjct: 352 MFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSL 411
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V ES K VLSK+G
Sbjct: 412 LNNHGFRLVFESNKFVLSKSG 432
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
+F+ FE + ++VFMGNSA S++ G+GKV LK+TSGK L L N LYVP +R+NL+S L
Sbjct: 352 MFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSL 411
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V S K+VLSK+G
Sbjct: 412 LNNHGFRLVFXSNKVVLSKSG 432
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
+F+ FE + ++VFMGNS S++ G+GKV LK+TSGK L L N LYVP +R+NL+ L
Sbjct: 352 MFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSL 411
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V ES K+VLSK+G
Sbjct: 412 LNNHGFRLVFESNKVVLSKSG 432
>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE+A +V MGN S+VLGKG + + TSGK + L N LYVP M +NL+S L
Sbjct: 323 LFKTFEDAKGBQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLTNVLYVPDMNKNLVSGDL 382
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L GIK V ESGKL+LSK+G
Sbjct: 383 LGKPGIKAVFESGKLILSKSG 403
>ref|XP_006465748.1| PREDICTED: uncharacterized protein LOC102628178 [Citrus sinensis]
Length = 2248
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/81 (50%), Positives = 59/81 (72%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE ++ +++FMGNSA+S++ G+G V LK+TSGK L L + LYV +R+NL+S L
Sbjct: 1276 LFTSFETVSNGEKLFMGNSAMSEIEGQGNVILKMTSGKELTLNDVLYVLEIRKNLVSGSL 1335
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L+ G + V ES ++VLSKNG
Sbjct: 1336 LNKHGFQMVFESNRVVLSKNG 1356
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE+A +V MGN S+VLGKG + + TSGK + L+N LYVP M +NL+S L
Sbjct: 323 LFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDL 382
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L GIK V ESGKL+L+K+G
Sbjct: 383 LGKPGIKAVFESGKLILTKSG 403
>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
Length = 804
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE+A +V MGN S+VLGKG + + TSGK + L+N LYVP M +NL+S L
Sbjct: 323 LFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVLYVPDMNKNLVSGDL 382
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L GIK V ESGKL+L K+G
Sbjct: 383 LGKPGIKAVFESGKLILXKSG 403
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +1
Query: 1 LFADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGL 180
LF FE+A +V MGN S+VLGKG + + TSGK + L N LYVP M +NL+S L
Sbjct: 116 LFKTFEDAKGDQEVQMGNEGGSKVLGKGTIEVAFTSGKRVTLINVLYVPDMNKNLVSGDL 175
Query: 181 LDVAGIKQVIESGKLVLSKNG 243
L GIK V ESGKL+LSK+G
Sbjct: 176 LGKPGIKAVFESGKLILSKSG 196
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 82.0 bits (201), Expect = 7e-14
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +1
Query: 4 FADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLL 183
F FE+A +V MGN S+VLGKG + + TSGK + L N LYVP M +NL+S L
Sbjct: 276 FKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKKVTLINVLYVPDMNKNLVSGDFL 335
Query: 184 DVAGIKQVIESGKLVLSKNG 243
GIK V ESGKL+LSK+G
Sbjct: 336 GKPGIKAVFESGKLILSKSG 355
>emb|CAN67169.1| hypothetical protein VITISV_017676 [Vitis vinifera]
Length = 241
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +1
Query: 37 QVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVAGIKQVIES 216
QVFMGN A S++ G+GKV LK+TSGK L L N LYVP +R+NL+ LL + G + V +S
Sbjct: 117 QVFMGNFATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSLLSIHGFRLVFKS 176
Query: 217 GKLVLSKNG 243
K VLSK+G
Sbjct: 177 NKFVLSKSG 185
>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
Length = 791
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +1
Query: 13 FEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVA 192
FE+A +V MGN S+VLGKG + + TSGK + L N LYVP M +NL+S LL
Sbjct: 305 FEDAKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKRVTLINVLYVPDMNKNLVSGDLLGKP 364
Query: 193 GIKQVIESGKLVLSKNG 243
K V ESGKL+LSK+G
Sbjct: 365 SFKAVFESGKLILSKSG 381
>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
Length = 565
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/69 (57%), Positives = 52/69 (75%)
Frame = +1
Query: 34 DQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVAGIKQVIE 213
+QVFMG+S + V+GKGKV LKLTSGK L L + L+VP +R NL+S LL AG+K + E
Sbjct: 220 EQVFMGDSRSTPVIGKGKVLLKLTSGKVLALCDVLHVPDIRWNLVSVSLLGKAGVKILFE 279
Query: 214 SGKLVLSKN 240
S K+VL+KN
Sbjct: 280 SDKIVLTKN 288
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = +1
Query: 34 DQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVAGIKQVIE 213
+QV++G+S + VLGKGKV LKLTSGK+L L + L+VPS+R NL+S LL G+K E
Sbjct: 350 EQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKVSFE 409
Query: 214 SGKLVLSKN 240
S K+V++KN
Sbjct: 410 SDKIVITKN 418
>emb|CAN80619.1| hypothetical protein VITISV_005064 [Vitis vinifera]
Length = 965
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +1
Query: 34 DQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVAGIKQVIE 213
+QVFMGNS ++V+GKGKV LKLTSGKSL L N L+VP++ NL+S LL A ++ + E
Sbjct: 241 EQVFMGNSRSTRVIGKGKVLLKLTSGKSLTLTNVLHVPNIHWNLVSISLLGKARMRILFE 300
Query: 214 SGKLVLSKN 240
K+VL+KN
Sbjct: 301 FDKIVLTKN 309
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +1
Query: 4 FADFEEATDIDQVFMGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLL 183
F +E D ++MGN + + +LG+GKV L+ +SGK+L L + ++VP +R+NL+S +L
Sbjct: 284 FKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSGKTLDLNDVIHVPGIRKNLVSGSVL 343
Query: 184 DVAGIKQVIESGKLVLSKNG 243
+ G KQV ES K VLSK G
Sbjct: 344 NKCGFKQVYESDKYVLSKCG 363
>ref|XP_006477890.1| PREDICTED: uncharacterized protein LOC102616497 [Citrus sinensis]
Length = 829
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +1
Query: 46 MGNSAISQVLGKGKVTLKLTSGKSLMLQNALYVPSMRRNLISSGLLDVAGIKQVIESGKL 225
MGNSA S++ G+GKV LK+TSGK L L + LYV +R+NL+S LL+ G + V ES +
Sbjct: 1 MGNSATSEIEGQGKVILKMTSGKELTLNDVLYVLEIRKNLVSGSLLNKHGFRMVFESDTV 60
Query: 226 VLSKNG 243
VLSKNG
Sbjct: 61 VLSKNG 66