BLASTX nr result

ID: Rheum21_contig00021073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00021073
         (396 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   102   5e-20
ref|XP_006485745.1| PREDICTED: general transcription factor IIE ...   100   2e-19
ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citr...   100   2e-19
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5...   100   2e-19
ref|XP_006341650.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_006341649.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_004155034.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_004508577.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ...   100   3e-19
ref|XP_003524511.1| PREDICTED: general transcription factor IIE ...   100   3e-19
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor...    99   8e-19
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor...    99   8e-19
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor...    99   8e-19
ref|XP_004235735.1| PREDICTED: general transcription factor IIE ...    97   2e-18
ref|XP_003549808.1| PREDICTED: general transcription factor IIE ...    96   4e-18
gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus...    96   5e-18
ref|XP_006854401.1| hypothetical protein AMTR_s00039p00190210 [A...    96   5e-18
ref|XP_003573797.1| PREDICTED: general transcription factor IIE ...    96   5e-18
ref|XP_004983104.1| PREDICTED: general transcription factor IIE ...    95   8e-18

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score =  102 bits (254), Expect = 5e-20
 Identities = 53/64 (82%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
 Frame = +3

Query: 207 MNVEPFNPFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREED 383
           M+VEPFN   +LVKL ARAFYDDITTKGDN PKT RSDNRG+AV+VLDALTRRQWVREED
Sbjct: 1   MSVEPFN---RLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREED 57

Query: 384 FAKD 395
            AKD
Sbjct: 58  LAKD 61


>ref|XP_006485745.1| PREDICTED: general transcription factor IIE subunit 1-like [Citrus
           sinensis]
          Length = 474

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PK+ RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 6   PFNRLVKLVARAFYDDITTKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKD 62


>ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citrus clementina]
           gi|557543173|gb|ESR54151.1| hypothetical protein
           CICLE_v10019993mg [Citrus clementina]
          Length = 474

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PK+ RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 6   PFNRLVKLVARAFYDDITTKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKD 62


>ref|XP_002331723.1| predicted protein [Populus trichocarpa]
           gi|566205569|ref|XP_006374149.1| transcription
           initiation factor IIE alpha subunit family protein
           [Populus trichocarpa] gi|550321822|gb|ERP51946.1|
           transcription initiation factor IIE alpha subunit family
           protein [Populus trichocarpa]
          Length = 472

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PKT RSDNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKE 61


>ref|XP_006341650.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
           X2 [Solanum tuberosum]
          Length = 472

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PK+ RSDNRG+AV++LDALTRRQWVREED AKD
Sbjct: 5   PFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 61


>ref|XP_006341649.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
           X1 [Solanum tuberosum]
          Length = 474

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PK+ RSDNRG+AV++LDALTRRQWVREED AKD
Sbjct: 5   PFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 61


>ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 403

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PKT RSDNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKN 61


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
           sativus]
          Length = 475

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/57 (85%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDDITTKGDN PKT RSDNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKN 61


>ref|XP_004508577.1| PREDICTED: general transcription factor IIE subunit 1-like [Cicer
           arietinum]
          Length = 474

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           P+NKLVKL ARAFYDD+T+KGDN PKT RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 4   PYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60


>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
           [Fragaria vesca subsp. vesca]
          Length = 451

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKLTARAFYDD+ TKGDN PKT RSDNRG+AV+VLDAL+RRQWVREED AKD
Sbjct: 5   PFNRLVKLTARAFYDDLPTKGDNQPKTGRSDNRGLAVVVLDALSRRQWVREEDLAKD 61


>ref|XP_003524511.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
           max]
          Length = 471

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/57 (84%), Positives = 53/57 (92%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           P+NKLVKL ARAFYDD+T+KGDN PKT RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 4   PYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60


>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
           cacao]
          Length = 473

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/57 (82%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDD+TTKGDN PKT R DNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAVVVLDALTRRQWVREEDLAKE 61


>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
           cacao]
          Length = 480

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/57 (82%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDD+TTKGDN PKT R DNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAVVVLDALTRRQWVREEDLAKE 61


>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
           cacao]
          Length = 475

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/57 (82%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           PFN+LVKL ARAFYDD+TTKGDN PKT R DNRG+AV+VLDALTRRQWVREED AK+
Sbjct: 5   PFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGIAVVVLDALTRRQWVREEDLAKE 61


>ref|XP_004235735.1| PREDICTED: general transcription factor IIE subunit 1-like [Solanum
           lycopersicum]
          Length = 472

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/56 (83%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
 Frame = +3

Query: 231 FNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           FN+LVKL ARAFYDDITTKGDN PK+ RSDNRG+AV++LDALTRRQWVREED AKD
Sbjct: 6   FNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 61


>ref|XP_003549808.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
           X1 [Glycine max]
          Length = 469

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 46/57 (80%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           P+NKL+KL ARAFYDD+T+ GDN PKT RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 4   PYNKLIKLGARAFYDDLTSTGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60


>gb|ESW27143.1| hypothetical protein PHAVU_003G177500g [Phaseolus vulgaris]
          Length = 473

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/57 (82%), Positives = 52/57 (91%), Gaps = 1/57 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           P+NKLVKL ARAFYDD+T+KGDN  KT RSDNRG+AV+VLDALTRRQWVREED AKD
Sbjct: 4   PYNKLVKLAARAFYDDLTSKGDNQLKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60


>ref|XP_006854401.1| hypothetical protein AMTR_s00039p00190210 [Amborella trichopoda]
           gi|548858077|gb|ERN15868.1| hypothetical protein
           AMTR_s00039p00190210 [Amborella trichopoda]
          Length = 478

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/56 (83%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
 Frame = +3

Query: 231 FNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAKD 395
           F +LVKL ARAFYDDI+TKGDN PKT RSDNRGMAV+VLDALTRRQWV+EED AKD
Sbjct: 7   FKRLVKLAARAFYDDISTKGDNQPKTGRSDNRGMAVVVLDALTRRQWVKEEDLAKD 62


>ref|XP_003573797.1| PREDICTED: general transcription factor IIE subunit 1-like
           [Brachypodium distachyon]
          Length = 465

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/56 (83%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
 Frame = +3

Query: 228 PFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFAK 392
           PFN+LVKL ARAFYDDI+ KGDN PKT R DNRGMAV+VLDALTRRQWVREED AK
Sbjct: 6   PFNRLVKLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLAK 61


>ref|XP_004983104.1| PREDICTED: general transcription factor IIE subunit 1-like [Setaria
           italica]
          Length = 463

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
 Frame = +3

Query: 213 VEPFNPFNKLVKLTARAFYDDITTKGDNLPKT-RSDNRGMAVIVLDALTRRQWVREEDFA 389
           +    PFN+LV+L ARAFYDDI+ KGDN PKT R DNRGMAV+VLDALTRRQWVREED A
Sbjct: 4   IPSIEPFNRLVRLAARAFYDDISMKGDNQPKTSRGDNRGMAVVVLDALTRRQWVREEDLA 63

Query: 390 K 392
           K
Sbjct: 64  K 64


Top