BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020732
         (1590 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              632   e-178
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   632   e-178
gb|EOY33067.1| General transcription factor II H2 isoform 1 [The...   625   e-176
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   604   e-170
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   604   e-170
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   602   e-169
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   601   e-169
ref|XP_002892263.1| ATGTF2H2/GTF2H2 [Arabidopsis lyrata subsp. l...   600   e-169
ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|5...   600   e-169
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   599   e-169
ref|NP_683275.2| transcription initiation factor TFIIH subunit H...   599   e-168
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   597   e-168
ref|XP_006418067.1| hypothetical protein EUTSA_v10007730mg [Eutr...   597   e-168
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   597   e-168
gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus pe...   594   e-167
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   592   e-166
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   590   e-166
ref|XP_006307618.1| hypothetical protein CARUB_v10009246mg [Caps...   590   e-166
gb|ESW34067.1| hypothetical protein PHAVU_001G121400g [Phaseolus...   589   e-165
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   589   e-165

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  632 bits (1629), Expect = e-178
 Identities = 297/429 (69%), Positives = 348/429 (81%), Gaps = 3/429 (0%)
 Frame = -3

Query: 1528 MNNIEHREVTNSRGKRLXXXXXXXXXXXXXXXXXA---WERTYADERSWESLKEDESGLL 1358
            MN++EHR+  +  G+RL                     WER YADERSWESL+EDESGLL
Sbjct: 62   MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 121

Query: 1357 FSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLYVIVDFSRAASEMDFRPSRMAIV 1178
              ID K +YH+QY              RIQKGLIRYLY++VD SRAASEMDF+PSRMA+V
Sbjct: 122  RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 181

Query: 1177 AKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGGSPESHIKSLMSKLECSGDASLQ 998
            AKH+E FIREFFDQNPLSQ+GL+T+KDG+A C++DLGGSP+SH+K+LM KLECSGD+SLQ
Sbjct: 182  AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 241

Query: 997  NALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMDTIQKCKISKVRCSVVGLAAEMF 818
            NAL+LVH YL++IPSYGHREVLI+YSALSTCDPGDIM+TIQ+CK SK+RCSV+GL+AE+F
Sbjct: 242  NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 301

Query: 817  ICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXXXXXANLIRMGFPQRAAEGAISI 638
            IC+H+CQETGGSYSVA+DESH K+LLLEH+           ANLI+MGFPQRAAEG ISI
Sbjct: 302  ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 361

Query: 637  CACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPP 458
            C+CHKEAK+G GYTCPRCKARVC+LPTECRICGLTLVSSPHLARSYHHLFPI PFDEV  
Sbjct: 362  CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 421

Query: 457  SPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCKKYFCLDCDIYIHESLHNCPGCE 278
            S LNN +Q+  + CFGCQ+SL+ PG+  + CV CPKCK++FCLDCDIYIHESLHNCPGCE
Sbjct: 422  SLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCE 481

Query: 277  SLRRSKSTS 251
            S R SK  S
Sbjct: 482  SFRHSKIVS 490


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  632 bits (1629), Expect = e-178
 Identities = 297/429 (69%), Positives = 348/429 (81%), Gaps = 3/429 (0%)
 Frame = -3

Query: 1528 MNNIEHREVTNSRGKRLXXXXXXXXXXXXXXXXXA---WERTYADERSWESLKEDESGLL 1358
            MN++EHR+  +  G+RL                     WER YADERSWESL+EDESGLL
Sbjct: 1    MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 60

Query: 1357 FSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLYVIVDFSRAASEMDFRPSRMAIV 1178
              ID K +YH+QY              RIQKGLIRYLY++VD SRAASEMDF+PSRMA+V
Sbjct: 61   RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 120

Query: 1177 AKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGGSPESHIKSLMSKLECSGDASLQ 998
            AKH+E FIREFFDQNPLSQ+GL+T+KDG+A C++DLGGSP+SH+K+LM KLECSGD+SLQ
Sbjct: 121  AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 180

Query: 997  NALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMDTIQKCKISKVRCSVVGLAAEMF 818
            NAL+LVH YL++IPSYGHREVLI+YSALSTCDPGDIM+TIQ+CK SK+RCSV+GL+AE+F
Sbjct: 181  NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 240

Query: 817  ICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXXXXXANLIRMGFPQRAAEGAISI 638
            IC+H+CQETGGSYSVA+DESH K+LLLEH+           ANLI+MGFPQRAAEG ISI
Sbjct: 241  ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 300

Query: 637  CACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPP 458
            C+CHKEAK+G GYTCPRCKARVC+LPTECRICGLTLVSSPHLARSYHHLFPI PFDEV  
Sbjct: 301  CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 360

Query: 457  SPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCKKYFCLDCDIYIHESLHNCPGCE 278
            S LNN +Q+  + CFGCQ+SL+ PG+  + CV CPKCK++FCLDCDIYIHESLHNCPGCE
Sbjct: 361  SLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCE 420

Query: 277  SLRRSKSTS 251
            S R SK  S
Sbjct: 421  SFRHSKIVS 429


>gb|EOY33067.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
            gi|508785812|gb|EOY33068.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785813|gb|EOY33069.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  625 bits (1613), Expect = e-176
 Identities = 290/389 (74%), Positives = 333/389 (85%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTY DERSWESL+EDESGLL  ID K LYHSQY              RIQKGLIRYLY
Sbjct: 29   WERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIRYLY 88

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D SRAASE DFRPSR+ ++AKH+E FIREFFDQNPLSQ+GL+T+KDG+A C++DLGG
Sbjct: 89   LVIDLSRAASETDFRPSRIVVIAKHVEAFIREFFDQNPLSQVGLLTIKDGVAQCLTDLGG 148

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM+KLECSGD+SLQNAL+LV  YL++IPSYGHREVLI+Y+ALSTCDPGDIM+
Sbjct: 149  SPESHIKALMNKLECSGDSSLQNALDLVDGYLNQIPSYGHREVLILYAALSTCDPGDIME 208

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GLAAEMFICKH+CQETGG+YSVA+DESH K+L+LEH+        
Sbjct: 209  TIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAE 268

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+ISIC+CHKEAK+G GYTCPRCKARVC+LPTECRICGLTLVS
Sbjct: 269  FATANLIKMGFPQRAAEGSISICSCHKEAKVGAGYTCPRCKARVCELPTECRICGLTLVS 328

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPIAPFDEVPP  LN+ N K  + CFGCQQSL++PG+     V CPKCK
Sbjct: 329  SPHLARSYHHLFPIAPFDEVPPFSLNDPNHKLQRNCFGCQQSLLNPGNKPGLLVVCPKCK 388

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSKS 257
             YFCLDCDIYIHESLHNCPGC+S R SK+
Sbjct: 389  GYFCLDCDIYIHESLHNCPGCDSFRHSKA 417


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis]
          Length = 424

 Score =  604 bits (1558), Expect = e-170
 Identities = 278/387 (71%), Positives = 329/387 (85%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER+YAD+RSWE+L+EDESG L  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 30   WERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLIRYLY 89

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D SRAA+EMDFRPSRMA+VAK +E F+REFF QNPLSQ+GL+TVKDG+A+C++DLGG
Sbjct: 90   IVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLTDLGG 149

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM KL CSGD+S+QNAL+LVH  L++IPSYGHREVLI+YSALSTCDPGDIM+
Sbjct: 150  SPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIME 209

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG+YSVA+DESH K+L+LEH+        
Sbjct: 210  TIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHSKELILEHAPPPPAIAE 269

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               A+LI+MGFPQRA EG+ISIC+CHKE K+GVGYTCPRCKARVC+LPTECRICGL LVS
Sbjct: 270  FAIASLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTECRICGLQLVS 329

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPIAPFDE  PS LN+ +     TCFGCQQSL++ G+ +  CV CPKCK
Sbjct: 330  SPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVACPKCK 389

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRS 263
            K+FCL+CDIYIHESLHNCPGCESLR+S
Sbjct: 390  KHFCLECDIYIHESLHNCPGCESLRQS 416


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
            gi|557522488|gb|ESR33855.1| hypothetical protein
            CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  604 bits (1558), Expect = e-170
 Identities = 278/387 (71%), Positives = 328/387 (84%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER+YAD+RSWE+L+EDESG L  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 30   WERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLIRYLY 89

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D SRAA+EMDFRPSRM +VAK +E F+REFFDQNPLSQ+GL+TVKDG+A+C++DLGG
Sbjct: 90   IVIDLSRAAAEMDFRPSRMVVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG 149

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM KL CSGD+S+QNAL+LVH  L++IPSYGHREVLI+YSALSTCDPGDIM+
Sbjct: 150  SPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIME 209

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG+YSVA+DESH K+L+LEH+        
Sbjct: 210  TIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAE 269

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               A+LI+MGFPQRA EG+ISIC+CHKE KIGVGYTCPRCKARVC+LPTEC ICGL LVS
Sbjct: 270  FAIASLIKMGFPQRAGEGSISICSCHKEVKIGVGYTCPRCKARVCELPTECCICGLQLVS 329

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPIAPFDE  PS LN+ +     TCFGCQQSL++ G+ +  CV CPKCK
Sbjct: 330  SPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVACPKCK 389

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRS 263
            K+FCL+CDIYIHESLHNCPGCESLR+S
Sbjct: 390  KHFCLECDIYIHESLHNCPGCESLRQS 416


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  602 bits (1553), Expect = e-169
 Identities = 274/390 (70%), Positives = 331/390 (84%), Gaps = 2/390 (0%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTYAD+RSWE+L+EDESGLL  ID K +YH+QY              RIQKGLIRYLY
Sbjct: 28   WERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLIRYLY 87

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++DFS+AA+EMDFRPSRMA+VAKH++ F+REFFDQNPLSQ+GL+T+KDG A+C++DLGG
Sbjct: 88   IVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLTDLGG 147

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESH+K+LM KLECSGDASLQN LELVH+YL++IPSYGHREVL++YSAL++CDPGDIM+
Sbjct: 148  SPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPGDIME 207

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            T+QKCK SK+RCSV+GL AE+FIC+H+CQETGGSYSVA+DESH K+LLLEH+        
Sbjct: 208  TVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAD 267

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
                NLI+MGFPQRAAE +I+IC+CHKEAK+G GYTCPRCKARVC+LPTECRICGLTL+S
Sbjct: 268  SAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLIS 327

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSP--GSVSSYCVTCPK 350
            SPHLARSYHHLFPI PFDEV     ++   +  + CFGCQ+SL++P  G+  S  V+CPK
Sbjct: 328  SPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRVSCPK 387

Query: 349  CKKYFCLDCDIYIHESLHNCPGCESLRRSK 260
            CK++FCLDCDIYIHESLHNCPGCES RR K
Sbjct: 388  CKQHFCLDCDIYIHESLHNCPGCESFRRPK 417


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
            gi|567871805|ref|XP_006428492.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530547|gb|ESR41730.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530549|gb|ESR41732.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  601 bits (1549), Expect = e-169
 Identities = 277/387 (71%), Positives = 323/387 (83%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER+YAD+RSWE+L+EDESG L  ID    YH+QY              RIQKGLIRYLY
Sbjct: 31   WERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLIRYLY 90

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D SRAA+EMDFRPSRMA+VAK +E F+REFFDQNPLSQ+GL+TVKDG+A+C++DLGG
Sbjct: 91   IVIDLSRAAAEMDFRPSRMAVVAKRVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG 150

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPE+HIK LM KL CSGD+SLQNAL+LV   L +IPSYGHREVLI+YSALSTCDPGDIM+
Sbjct: 151  SPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIME 210

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQ+TGGSYSVA+DESH K+L++EH+        
Sbjct: 211  TIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIAE 270

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRA EG+ISIC+CHKE K+GVGYTCPRCKARVC+LPT+C ICGL LVS
Sbjct: 271  FAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGLQLVS 330

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPIAPFDEV P  LN+   +   TCFGCQQSL+S G+    CV CPKCK
Sbjct: 331  SPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLCVACPKCK 390

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRS 263
            K+FCL+CDIYIHESLHNCPGCESLR S
Sbjct: 391  KHFCLECDIYIHESLHNCPGCESLRHS 417


>ref|XP_002892263.1| ATGTF2H2/GTF2H2 [Arabidopsis lyrata subsp. lyrata]
            gi|297338105|gb|EFH68522.1| ATGTF2H2/GTF2H2 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 421

 Score =  600 bits (1546), Expect = e-169
 Identities = 282/392 (71%), Positives = 327/392 (83%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER Y D+RSWE L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRLRMLSAAAAGTRIQKGLIRYLY 85

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++DFSRAA+EMDFRPSRMAI+AKH+E FIREFFDQNPLSQ+GL+++K+G+AH ++DLGG
Sbjct: 86   IVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGVAHTLTDLGG 145

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPE+HIK+LM KLE  GD+SLQNALELVH +L+++PSYGHREVLI+YSAL TCDPGDIM+
Sbjct: 146  SPETHIKALMGKLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYSALCTCDPGDIME 205

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG YSVA+DE HLKDLLLEH+        
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+++IC+CHKE KIG GY CPRCKARVCDLPTEC ICGLTLVS
Sbjct: 266  FAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPRCKARVCDLPTECTICGLTLVS 325

Query: 523  SPHLARSYHHLFPIAPFDEVPP-SPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKC 347
            SPHLARSYHHLFPIAPFDEVP  S LN+  +K  ++CFGCQQSL+  G+    CVTC KC
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPGPCVTCRKC 385

Query: 346  KKYFCLDCDIYIHESLHNCPGCESLRRSKSTS 251
            K YFCLDCDIYIHESLHNCPGCES+ R KS S
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIHRPKSVS 417


>ref|XP_002331276.1| predicted protein [Populus trichocarpa]
            gi|566166073|ref|XP_006384271.1| basic transcription
            factor 2 family protein [Populus trichocarpa]
            gi|550340817|gb|ERP62068.1| basic transcription factor 2
            family protein [Populus trichocarpa]
          Length = 412

 Score =  600 bits (1546), Expect = e-169
 Identities = 280/386 (72%), Positives = 331/386 (85%)
 Frame = -3

Query: 1420 ERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLYV 1241
            ER Y+DERSWE+L+EDESGLL  +D K +YH+QY              RIQKGLIR+LY+
Sbjct: 27   ERNYSDERSWEALQEDESGLLRPLDNKAMYHAQYRRRLRSLSTASNSQRIQKGLIRFLYI 86

Query: 1240 IVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGGS 1061
            ++D SRAAS MDFRPSRMA+VA+++E FIREFFDQNPLSQ+ L+T+KDG+A+ +++LGGS
Sbjct: 87   VLDLSRAASVMDFRPSRMAVVAQNVEAFIREFFDQNPLSQIALVTIKDGVAYSLTELGGS 146

Query: 1060 PESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMDT 881
            PESHIK+LM+KLECSGD+SLQNALELVH YL +IPSYG+REVLI+YSAL+TCDPGDIM+T
Sbjct: 147  PESHIKALMAKLECSGDSSLQNALELVHEYLDKIPSYGNREVLILYSALTTCDPGDIMET 206

Query: 880  IQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXXX 701
            IQKCK SK+RCSV+GL+AEMFICKH+CQETGG YSVA+DESH K+L+LEH+         
Sbjct: 207  IQKCKKSKMRCSVIGLSAEMFICKHLCQETGGLYSVALDESHFKELILEHAPPPPAIAEF 266

Query: 700  XXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVSS 521
              ANLI+MGFPQRAAEG+ISIC+CHKE+K+G GY CPRCKARVC+LPTECRICGLTLVSS
Sbjct: 267  AIANLIKMGFPQRAAEGSISICSCHKESKVGEGYICPRCKARVCELPTECRICGLTLVSS 326

Query: 520  PHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCKK 341
            PHLARSYHHLFPIAPFDEV PS  N  +++  +TCFGCQQSLV+PG+  S  V CPKCK+
Sbjct: 327  PHLARSYHHLFPIAPFDEVKPSRQNEPHRRSQKTCFGCQQSLVNPGNKPSLQVACPKCKQ 386

Query: 340  YFCLDCDIYIHESLHNCPGCESLRRS 263
            YFCLDCDIYIHESLHNCPGCESLR S
Sbjct: 387  YFCLDCDIYIHESLHNCPGCESLRAS 412


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  599 bits (1545), Expect = e-169
 Identities = 278/393 (70%), Positives = 326/393 (82%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTYA++RSWE+L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 27   WERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLY 86

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            ++VD S+AASE DFRPSRMA++ K +E FIREFFDQNPLS +GL+T+KDGIAHCI++LGG
Sbjct: 87   IVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELGG 146

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM KLECSGDASLQNALELV  YL++IPSYGHREVLI+YSALSTCDPGD+M+
Sbjct: 147  SPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLME 206

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GLAAEMF+CKH+CQETGG+YSVA+DESH K+L+LEH+        
Sbjct: 207  TIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAE 266

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQR+AEG+++IC CH+EAK G GYTCPRCK RVC+LPTECR+CGLTL+S
Sbjct: 267  YATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLIS 326

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI  FDEV PS  N++N     TCFGCQQSL+S G+     V CPKCK
Sbjct: 327  SPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVICPKCK 386

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSKSTSPS 245
            + FCLDCDIY+HESLHNCPGCES R SKS + S
Sbjct: 387  QQFCLDCDIYVHESLHNCPGCESSRHSKSVTAS 419


>ref|NP_683275.2| transcription initiation factor TFIIH subunit H2 [Arabidopsis
            thaliana] gi|22087278|gb|AAM90909.1|AF499443_1
            p44/SSL1-like protein [Arabidopsis thaliana]
            gi|4056421|gb|AAC97995.1| Similar to gb|Z30094 basic
            transcripion factor 2, 44 kD subunit from Homo sapiens.
            EST gb|W43325 comes from this gene [Arabidopsis thaliana]
            gi|110738828|dbj|BAF01337.1| putative transcription
            factor [Arabidopsis thaliana] gi|332189663|gb|AEE27784.1|
            transcription initiation factor TFIIH subunit H2
            [Arabidopsis thaliana]
          Length = 421

 Score =  599 bits (1544), Expect = e-168
 Identities = 282/392 (71%), Positives = 327/392 (83%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER Y D+RSWE L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRLRMLSAAAAGTRIQKGLIRYLY 85

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++DFSRAA+EMDFRPSRMAI+AKH+E FIREFFDQNPLSQ+GL+++K+G+AH ++DLGG
Sbjct: 86   IVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGVAHTLTDLGG 145

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPE+HIK+LM KLE  GD+SLQNALELVH +L+++PSYGHREVLI+YSAL TCDPGDIM+
Sbjct: 146  SPETHIKALMGKLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYSALCTCDPGDIME 205

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG YSVA+DE HLKDLLLEH+        
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+++IC+CHKE KIG GY CPRCKARVCDLPTEC ICGLTLVS
Sbjct: 266  FAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPRCKARVCDLPTECTICGLTLVS 325

Query: 523  SPHLARSYHHLFPIAPFDEVPP-SPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKC 347
            SPHLARSYHHLFPIAPFDEVP  S LN+  +K  ++CFGCQQSL+  G+    CVTC KC
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKC 385

Query: 346  KKYFCLDCDIYIHESLHNCPGCESLRRSKSTS 251
            K YFCLDCDIYIHESLHNCPGCES+ R KS S
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIHRPKSVS 417


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  597 bits (1540), Expect = e-168
 Identities = 280/395 (70%), Positives = 330/395 (83%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTYADERSWESL+EDESGLL  ID K  YH+QY               IQKGLIRYL+
Sbjct: 33   WERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVR----IQKGLIRYLF 88

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D S+AA+EMDFRPSRMA+VAKH+E FIREFFDQNPLSQ+GL+T+KDG+AHC++DLGG
Sbjct: 89   LVIDLSKAAAEMDFRPSRMAVVAKHVEAFIREFFDQNPLSQVGLVTIKDGVAHCLTDLGG 148

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESH+KSLM KLECSG++S+QNAL+LVH YL++IPSYGHREVLI YSALSTCDPGDIM+
Sbjct: 149  SPESHVKSLMGKLECSGESSIQNALDLVHDYLNQIPSYGHREVLIFYSALSTCDPGDIME 208

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AE+FICKH+CQETGGSYSVA+DESH K+L+LEH+        
Sbjct: 209  TIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSYSVALDESHFKELILEHAPPPPAIAE 268

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAE +I+IC+CHKEAK G GYTCPRCKARVC+LPTEC+ CGLTL+S
Sbjct: 269  YAIANLIKMGFPQRAAESSIAICSCHKEAKAGGGYTCPRCKARVCELPTECQTCGLTLIS 328

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI PFDE+  S L++ ++K  + CFGCQQSL+  G+     V+CPKCK
Sbjct: 329  SPHLARSYHHLFPIVPFDEMSTSLLSDPHRKLSKACFGCQQSLLGFGNKPGPRVSCPKCK 388

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSKSTSPS*E 239
              FCLDCDIYIHESLHNCPGCES R SK  + S E
Sbjct: 389  HQFCLDCDIYIHESLHNCPGCESARHSKPVAMSEE 423


>ref|XP_006418067.1| hypothetical protein EUTSA_v10007730mg [Eutrema salsugineum]
            gi|557095838|gb|ESQ36420.1| hypothetical protein
            EUTSA_v10007730mg [Eutrema salsugineum]
          Length = 421

 Score =  597 bits (1540), Expect = e-168
 Identities = 280/392 (71%), Positives = 328/392 (83%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER Y D+RSWE+L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEALQEDESGLLRPIDNSAIYHAQYRRRLRILSAAAAGTRIQKGLIRYLY 85

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++DFSRAA+E DFRPSRMAI+AKH+E FIREFFDQNPLSQ+GL+++K+G+AH ++DLGG
Sbjct: 86   IVIDFSRAAAETDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGVAHTLTDLGG 145

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHI++LM KLE  GD+SLQNALELVH +L+++PSYGHREVLI+YSAL TCDPGDIM+
Sbjct: 146  SPESHIQALMGKLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYSALCTCDPGDIME 205

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG YSVA+DE HLKDLLLEH+        
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+++IC+CHK+ KIG GYTCPRCKARVC+LPTEC ICGLTLVS
Sbjct: 266  FAVANLIKMGFPQRAAEGSMAICSCHKDVKIGAGYTCPRCKARVCELPTECTICGLTLVS 325

Query: 523  SPHLARSYHHLFPIAPFDEVPP-SPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKC 347
            SPHLARSYHHLFPIAPFDEVP  S LN++ +K  + CFGCQQSL+  G+    CVTC  C
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPTLSSLNDSRRKLGKCCFGCQQSLLGAGNKQGACVTCRNC 385

Query: 346  KKYFCLDCDIYIHESLHNCPGCESLRRSKSTS 251
            K YFCLDCDIYIHESLHNCPGCES+RR KS S
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIRRPKSVS 417


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X2 [Citrus sinensis]
            gi|568877613|ref|XP_006491822.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X3
            [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  597 bits (1538), Expect = e-168
 Identities = 276/387 (71%), Positives = 322/387 (83%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER+YAD+RSWE+L+EDESG L  ID    YH+QY              RIQKGLIRYLY
Sbjct: 31   WERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLIRYLY 90

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D SRAA+EMDFRPSRMA+VAK +E F+REFFDQNPLSQ+GL+TVKDG+A+C++DLGG
Sbjct: 91   IVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLGG 150

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPE+HIK LM KL CSGD+SLQNAL+LV   L +IPSYGHREVLI+YSALSTCDPGDIM+
Sbjct: 151  SPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIME 210

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQ+TGGSYSVA+DESH K+L++EH+        
Sbjct: 211  TIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIAE 270

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRA EG+ISIC+CHKE K+GVGYTCPRCKARVC+LPT+C ICGL LVS
Sbjct: 271  FAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGLQLVS 330

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPIAPFDEV P  LN+   +   TCFGCQQSL+S G+     V CPKCK
Sbjct: 331  SPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKCK 390

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRS 263
            K+FCL+CDIYIHESLHNCPGCESLR S
Sbjct: 391  KHFCLECDIYIHESLHNCPGCESLRHS 417


>gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  594 bits (1532), Expect = e-167
 Identities = 275/388 (70%), Positives = 324/388 (83%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER YADERSWESL+EDESGLL  ID + L H+QY               IQKGLIRY+Y
Sbjct: 30   WERAYADERSWESLQEDESGLLQPIDNQSLKHAQYRRRLRAASTAR----IQKGLIRYVY 85

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D S+AA+EMDFRPSRM +VAKH+E FI EFF QNPLSQ+GL+T+KDG+AHC++DLGG
Sbjct: 86   IVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFYQNPLSQVGLVTIKDGVAHCLTDLGG 145

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SP SH+K+LM KLECSGD+SLQNAL+LVH YL +IPSYGHREVLI+YSALSTCDPGDIM+
Sbjct: 146  SPNSHVKALMGKLECSGDSSLQNALDLVHGYLEQIPSYGHREVLILYSALSTCDPGDIME 205

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AE+FICKH+CQETGG Y +A+DE HLK+L+LEH+        
Sbjct: 206  TIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGLYYIALDEPHLKELILEHAPPPPAIAE 265

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+++IC+CHKEAK+G GYTCPRCKARVCDLPTECRICGLTL+S
Sbjct: 266  FAIANLIKMGFPQRAAEGSVAICSCHKEAKVGGGYTCPRCKARVCDLPTECRICGLTLIS 325

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI PFDEV PS L +   K  + CFGCQQSL++PG+  S  V CPKCK
Sbjct: 326  SPHLARSYHHLFPIVPFDEVSPSLLIDQQNKFPRACFGCQQSLLNPGNKPSLRVACPKCK 385

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSK 260
            ++FCLDCDIYIH+SLHNCPGCES   SK
Sbjct: 386  QHFCLDCDIYIHDSLHNCPGCESASHSK 413


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  592 bits (1526), Expect = e-166
 Identities = 276/395 (69%), Positives = 326/395 (82%), Gaps = 4/395 (1%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER Y ++RSWESL+EDESGLL  ID   ++H+QY              RIQKGLIRYLY
Sbjct: 29   WERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLIRYLY 88

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            ++VD S+AASE DFRPSRMA++AK +E+FIREFFDQNPLS +GL+T KDG+A+C++DLGG
Sbjct: 89   IVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLTDLGG 148

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM KLECSGDASLQNALELVH+ L++IPSYGHREVLI+YSALSTCDPGD+M+
Sbjct: 149  SPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPGDLME 208

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GLAAEMFICKH+CQETGG+YSVA+DESH K+L+LEHS        
Sbjct: 209  TIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPPAIAE 268

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAEG+++IC CH+EAK G GYTCPRCK RVC+LPTECR+CGLTL+S
Sbjct: 269  YATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLIS 328

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVS----PGSVSSYCVTC 356
            SPHLARSYHHLFPI PF E+ PS  N+ N     TCFGCQQSL+S     G+ +   V+C
Sbjct: 329  SPHLARSYHHLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAELSVSC 388

Query: 355  PKCKKYFCLDCDIYIHESLHNCPGCESLRRSKSTS 251
            PKCK+ FCLDCD+YIHESLHNCPGCES R SKS +
Sbjct: 389  PKCKQQFCLDCDMYIHESLHNCPGCESFRHSKSVT 423


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47 subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  590 bits (1522), Expect = e-166
 Identities = 274/388 (70%), Positives = 323/388 (83%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER YADERSWESL+EDESGLL  ID + L+H+QY               IQKGLIRYLY
Sbjct: 29   WERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLRAATTAR----IQKGLIRYLY 84

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++D S+AASEMDFRPSRM +VAKH+E FIRE+F QNPLSQ+GL+T+KDG++H ++DLGG
Sbjct: 85   IVIDLSKAASEMDFRPSRMGVVAKHVEAFIREYFYQNPLSQVGLVTIKDGVSHILTDLGG 144

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESH+K+LM KLECSGDASLQNAL+LV  YL +IPSYGHREVLI+YSALSTCDPGDIM 
Sbjct: 145  SPESHVKALMGKLECSGDASLQNALDLVQGYLDQIPSYGHREVLIMYSALSTCDPGDIMG 204

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AE+FICKH+CQETGGSY +A+DESHLKDL+LEH+        
Sbjct: 205  TIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGSYYIALDESHLKDLILEHAPPPPAIAE 264

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQRAAE +++IC+CHKEAK+G GYTCPRCKARVC+LPTECRICGLTL+S
Sbjct: 265  FAIANLIKMGFPQRAAESSVAICSCHKEAKVGDGYTCPRCKARVCELPTECRICGLTLIS 324

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI PFDEV  S  ++   K  + CFGCQQS++ PG+     V CPKCK
Sbjct: 325  SPHLARSYHHLFPIVPFDEVSMSLYSDQQNKLPKACFGCQQSVLGPGNKPGLRVACPKCK 384

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSK 260
            ++FCLDCDIYIHESLHNCPGC+S R SK
Sbjct: 385  QHFCLDCDIYIHESLHNCPGCDSTRHSK 412


>ref|XP_006307618.1| hypothetical protein CARUB_v10009246mg [Capsella rubella]
            gi|482576329|gb|EOA40516.1| hypothetical protein
            CARUB_v10009246mg [Capsella rubella]
          Length = 421

 Score =  590 bits (1520), Expect = e-166
 Identities = 277/392 (70%), Positives = 323/392 (82%), Gaps = 1/392 (0%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WER Y D+RSWE L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRLRMLSAAAAGTRIQKGLIRYLY 85

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            +++DFSRAA+E DFRPSR+A++AKH+E FIREFFDQNPLSQ+GL+++K+G+AH ++DLGG
Sbjct: 86   IVIDFSRAAAETDFRPSRIAVMAKHVEAFIREFFDQNPLSQVGLVSIKNGVAHTLTDLGG 145

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPE+HIK LM KLE  GD+SLQNALELV+ +L ++PSYGHREVLI+YSAL TCDPGDIMD
Sbjct: 146  SPETHIKELMGKLEALGDSSLQNALELVNEHLSQVPSYGHREVLILYSALCTCDPGDIMD 205

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GL+AEMFICKH+CQETGG YSVA+DE HLKDLLLEH+        
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               +NLI+MGFPQRAAEG+++IC+CHKE KIG GY CPRCKARVCDLPTEC ICGLTLVS
Sbjct: 266  FAISNLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPRCKARVCDLPTECTICGLTLVS 325

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKEL-QTCFGCQQSLVSPGSVSSYCVTCPKC 347
            SPHLARSYHHLFPIAPFDEVP     N ++K+L ++CFGCQQSL   G+    CVTC KC
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPALSSLNDSRKDLGKSCFGCQQSLNGAGNKPGPCVTCRKC 385

Query: 346  KKYFCLDCDIYIHESLHNCPGCESLRRSKSTS 251
            K YFCLDCDIYIHESLHNCPGCES+ R KS S
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIHRPKSVS 417


>gb|ESW34067.1| hypothetical protein PHAVU_001G121400g [Phaseolus vulgaris]
          Length = 420

 Score =  589 bits (1518), Expect = e-165
 Identities = 274/393 (69%), Positives = 324/393 (82%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTYA++RSWE+L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 27   WERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLY 86

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            ++VD S+AASE DFRPSRMA++ K +EVFIREFFDQNPLS +GL+T+KDGIA+CI++LGG
Sbjct: 87   IVVDLSKAASERDFRPSRMAVIGKQVEVFIREFFDQNPLSHVGLVTIKDGIANCITELGG 146

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHI ++M KLECSGDASLQNALELV   L++IPSYGHRE LI+YSALSTCDPGD+M+
Sbjct: 147  SPESHINAMMGKLECSGDASLQNALELVLGCLNQIPSYGHREALILYSALSTCDPGDLME 206

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GLAAEMF+CKH+CQETGG+YSVA+DESH K+L+LEH+        
Sbjct: 207  TIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPAIAE 266

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQR+AEG+++IC CH+EAK G GYTCPRCK RVC+LPTECRICGLTL+S
Sbjct: 267  YATANLIKMGFPQRSAEGSVAICTCHEEAKAGGGYTCPRCKVRVCELPTECRICGLTLIS 326

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI  FDEV PS  N++++    TCFGCQQSL + G+     V CPKCK
Sbjct: 327  SPHLARSYHHLFPIVMFDEVSPSSQNDSSRSFSNTCFGCQQSLFTQGNKPGLSVICPKCK 386

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSKSTSPS 245
            + FCLDCDIYIHESLHNCPGCES R SKS + S
Sbjct: 387  QQFCLDCDIYIHESLHNCPGCESSRHSKSVTAS 419


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Glycine max] gi|571487648|ref|XP_006590708.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X2 [Glycine max] gi|571487650|ref|XP_006590709.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X3 [Glycine max]
            gi|571487652|ref|XP_006590710.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X4
            [Glycine max] gi|571487654|ref|XP_006590711.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X5 [Glycine max]
          Length = 419

 Score =  589 bits (1518), Expect = e-165
 Identities = 274/393 (69%), Positives = 325/393 (82%)
 Frame = -3

Query: 1423 WERTYADERSWESLKEDESGLLFSIDEKKLYHSQYXXXXXXXXXXXXXXRIQKGLIRYLY 1244
            WERTYA++RSWE+L+EDESGLL  ID   +YH+QY              RIQKGLIRYLY
Sbjct: 27   WERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYLY 86

Query: 1243 VIVDFSRAASEMDFRPSRMAIVAKHLEVFIREFFDQNPLSQLGLITVKDGIAHCISDLGG 1064
            ++VD S+AASE DFRPSRM ++ K +E FIREFFDQNPLS +GL+T+KDGIAHCI++LGG
Sbjct: 87   IVVDLSKAASERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELGG 146

Query: 1063 SPESHIKSLMSKLECSGDASLQNALELVHAYLHEIPSYGHREVLIIYSALSTCDPGDIMD 884
            SPESHIK+LM KLECSGDASLQNALELV  YL++IPSYGHREVLI+YSALSTCDPGD+M+
Sbjct: 147  SPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLME 206

Query: 883  TIQKCKISKVRCSVVGLAAEMFICKHICQETGGSYSVAMDESHLKDLLLEHSXXXXXXXX 704
            TIQKCK SK+RCSV+GLAAEMF+CKH+C+ETGG+YSVA+DESH K+L+LEH+        
Sbjct: 207  TIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGTYSVALDESHFKELILEHAPPPPAIAE 266

Query: 703  XXXANLIRMGFPQRAAEGAISICACHKEAKIGVGYTCPRCKARVCDLPTECRICGLTLVS 524
               ANLI+MGFPQR+AEG+++IC CH+EAK G GYTCPRCK RVC+LPTECR+CGLTL+S
Sbjct: 267  YSTANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLIS 326

Query: 523  SPHLARSYHHLFPIAPFDEVPPSPLNNANQKELQTCFGCQQSLVSPGSVSSYCVTCPKCK 344
            SPHLARSYHHLFPI  FDEV PS   ++++    TCFGCQQSL+S G+     V CPKCK
Sbjct: 327  SPHLARSYHHLFPIVMFDEVTPSQ-KDSSRSFPNTCFGCQQSLLSQGNKPGLSVICPKCK 385

Query: 343  KYFCLDCDIYIHESLHNCPGCESLRRSKSTSPS 245
            + FCLDCDIY+HESLHNCPGCES R SKS + S
Sbjct: 386  QQFCLDCDIYVHESLHNCPGCESSRHSKSVTAS 418