BLASTX nr result
ID: Rheum21_contig00020417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020417
(629 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma... 93 5e-17
gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [T... 89 8e-16
gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [T... 89 8e-16
gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [T... 89 8e-16
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 88 2e-15
emb|CBI35690.3| unnamed protein product [Vitis vinifera] 88 2e-15
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] 88 2e-15
ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Popu... 88 2e-15
ref|XP_002519032.1| double-stranded RNA binding protein, putativ... 87 4e-15
ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Popu... 86 7e-15
ref|XP_002329761.1| predicted protein [Populus trichocarpa] 85 2e-14
ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [A... 84 3e-14
ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal doma... 84 4e-14
ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal doma... 84 4e-14
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma... 84 4e-14
ref|XP_004293503.1| PREDICTED: RNA polymerase II C-terminal doma... 80 4e-13
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma... 80 4e-13
gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-l... 79 8e-13
gb|EMJ15747.1| hypothetical protein PRUPE_ppa000988mg [Prunus pe... 79 8e-13
ref|XP_006413749.1| hypothetical protein EUTSA_v10024324mg [Eutr... 79 1e-12
>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Cucumis sativus]
gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 1-like [Cucumis sativus]
Length = 803
Score = 93.2 bits (230), Expect = 5e-17
Identities = 54/114 (47%), Positives = 66/114 (57%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VYHGD LLGDVEIY + K IRI HFSQP
Sbjct: 1 MYKSVVYHGDELLGDVEIYPEEKNGYKN------------------IEVKEIRITHFSQP 42
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TIA+ G+C KMES S+S D +PL++LHS+C+ ENK
Sbjct: 43 SERCPPLAVLHTIAASGICFKMESK------TSQSQD--TPLNLLHSSCIMENK 88
>gb|EOY28304.1| C-terminal domain phosphatase-like 1 isoform 3 [Theobroma cacao]
Length = 870
Score = 89.4 bits (220), Expect = 8e-16
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = -2
Query: 352 ISTMIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHF 173
+++M ++ VY G+ +LG+VEIY K++V+ + + K IRI++
Sbjct: 1 MTSMYKSVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEM---KEIRIEYL 57
Query: 172 SQPSERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
+Q SERCPPLAVL+TI S G+C KMESS ++ ++S+ + PL +LHS C+R+NK
Sbjct: 58 TQGSERCPPLAVLHTITSSGICFKMESSKDNNYSSSQD---SPPLHLLHSECIRDNK 111
>gb|EOY28303.1| C-terminal domain phosphatase-like 1 isoform 2 [Theobroma cacao]
Length = 984
Score = 89.4 bits (220), Expect = 8e-16
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = -2
Query: 352 ISTMIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHF 173
+++M ++ VY G+ +LG+VEIY K++V+ + + K IRI++
Sbjct: 1 MTSMYKSVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEM---KEIRIEYL 57
Query: 172 SQPSERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
+Q SERCPPLAVL+TI S G+C KMESS ++ ++S+ + PL +LHS C+R+NK
Sbjct: 58 TQGSERCPPLAVLHTITSSGICFKMESSKDNNYSSSQD---SPPLHLLHSECIRDNK 111
>gb|EOY28302.1| C-terminal domain phosphatase-like 1 isoform 1 [Theobroma cacao]
Length = 978
Score = 89.4 bits (220), Expect = 8e-16
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = -2
Query: 352 ISTMIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHF 173
+++M ++ VY G+ +LG+VEIY K++V+ + + K IRI++
Sbjct: 1 MTSMYKSVVYRGEEVLGEVEIYPQQQLQQQQQLREEEDERKIMVMEEEM---KEIRIEYL 57
Query: 172 SQPSERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
+Q SERCPPLAVL+TI S G+C KMESS ++ ++S+ + PL +LHS C+R+NK
Sbjct: 58 TQGSERCPPLAVLHTITSSGICFKMESSKDNNYSSSQD---SPPLHLLHSECIRDNK 111
>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Vitis vinifera]
Length = 860
Score = 88.2 bits (217), Expect = 2e-15
Identities = 51/114 (44%), Positives = 67/114 (58%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY GD+++G+VEIY L+L+ K IRI H+SQP
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQG------------------LELM---KEIRISHYSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMES S++ +PL +LHSTC+RENK
Sbjct: 40 SERCPPLAVLHTITSCGVCFKMES--------SKAQSQDTPLYLLHSTCIRENK 85
>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 88.2 bits (217), Expect = 2e-15
Identities = 51/114 (44%), Positives = 67/114 (58%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY GD+++G+VEIY L+L+ K IRI H+SQP
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQG------------------LELM---KEIRISHYSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMES S++ +PL +LHSTC+RENK
Sbjct: 40 SERCPPLAVLHTITSCGVCFKMES--------SKAQSQDTPLYLLHSTCIRENK 85
>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
Length = 894
Score = 88.2 bits (217), Expect = 2e-15
Identities = 51/114 (44%), Positives = 67/114 (58%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY GD+++G+VEIY L+L+ K IRI H+SQP
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQG------------------LELM---KEIRISHYSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMES S++ +PL +LHSTC+RENK
Sbjct: 40 SERCPPLAVLHTITSCGVCFKMES--------SKAQSQDTPLYLLHSTCIRENK 85
>ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Populus trichocarpa]
gi|550340277|gb|EEE85528.2| hypothetical protein
POPTR_0004s04010g [Populus trichocarpa]
Length = 996
Score = 87.8 bits (216), Expect = 2e-15
Identities = 53/114 (46%), Positives = 66/114 (57%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY GD LLG+VEIY K V+D ++ K IRI HFSQ
Sbjct: 1 MYKSVVYKGDELLGEVEIYAQEQQQEEEENKN-----KKKRVIDEIV--KEIRISHFSQT 53
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KME S T + SPL +LHS+C++ENK
Sbjct: 54 SERCPPLAVLHTITSIGVCFKMEESTSSSTTKISQQE--SPLHLLHSSCIQENK 105
>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223541695|gb|EEF43243.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 978
Score = 87.0 bits (214), Expect = 4e-15
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVV--VLDLLMRDKRIRIDHFS 170
M ++ VY GD LLG+VEIY ++ V+D ++ K IRI HFS
Sbjct: 1 MYKSVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEIL--KGIRISHFS 58
Query: 169 QPSERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
Q SERCPPLAVL+TI + G+C KMES NS SLD +PL +LHS+C++E+K
Sbjct: 59 QASERCPPLAVLHTITTNGICFKMESK------NSVSLD--TPLHLLHSSCIQESK 106
>ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Populus trichocarpa]
gi|550327613|gb|ERP55122.1| hypothetical protein
POPTR_0011s04910g [Populus trichocarpa]
Length = 990
Score = 86.3 bits (212), Expect = 7e-15
Identities = 53/114 (46%), Positives = 66/114 (57%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY G+ LLG+VEIY K V+D ++ K IRI HFSQ
Sbjct: 1 MYKSVVYKGEELLGEVEIYAQEQQQEEEENKN-----KRKRVIDEIV--KGIRISHFSQA 53
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KME S T S SPL +LHS+C++ENK
Sbjct: 54 SERCPPLAVLHTITSIGVCFKMEESTASSSTKISS-QQESPLRLLHSSCIQENK 106
>ref|XP_002329761.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 84.7 bits (208), Expect = 2e-14
Identities = 52/112 (46%), Positives = 65/112 (58%)
Frame = -2
Query: 337 RTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQPSE 158
++ VY G+ LLG+VEIY K V+D ++ K IRI HFSQ SE
Sbjct: 2 KSVVYKGEELLGEVEIYAQEQQQEEEENKN-----KRKRVIDEIV--KGIRISHFSQASE 54
Query: 157 RCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
RCPPLAVL+TI S G+C KME S T S SPL +LHS+C++ENK
Sbjct: 55 RCPPLAVLHTITSIGVCFKMEESTASSSTKISS-QQESPLRLLHSSCIQENK 105
>ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [Amborella trichopoda]
gi|548832426|gb|ERM95222.1| hypothetical protein
AMTR_s00009p00267690 [Amborella trichopoda]
Length = 942
Score = 84.0 bits (206), Expect = 3e-14
Identities = 49/114 (42%), Positives = 63/114 (55%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++AVYHGD+LLG+ E+Y L+L K IRI H S P
Sbjct: 1 MFKSAVYHGDSLLGEAEVYPEREY------------------LNLETITKEIRISHLSLP 42
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TIAS G+C K+E +S SPL L++TCL++NK
Sbjct: 43 SERCPPLAVLHTIASCGVCFKLE---------FKSQSGESPLFSLYNTCLKDNK 87
>ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X3 [Glycine max]
Length = 932
Score = 83.6 bits (205), Expect = 4e-14
Identities = 52/114 (45%), Positives = 63/114 (55%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M R+ VYHG+ +G+VEIY +DL K IRI HFSQP
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKKN-----------------IDL----KEIRISHFSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMESS S++ L LHS+C+RENK
Sbjct: 40 SERCPPLAVLHTITSFGICFKMESS------TSQTRQQQDVLFHLHSSCIRENK 87
>ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X2 [Glycine max]
Length = 937
Score = 83.6 bits (205), Expect = 4e-14
Identities = 52/114 (45%), Positives = 63/114 (55%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M R+ VYHG+ +G+VEIY +DL K IRI HFSQP
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKKN-----------------IDL----KEIRISHFSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMESS S++ L LHS+C+RENK
Sbjct: 40 SERCPPLAVLHTITSFGICFKMESS------TSQTRQQQDVLFHLHSSCIRENK 87
>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X1 [Glycine max]
Length = 958
Score = 83.6 bits (205), Expect = 4e-14
Identities = 52/114 (45%), Positives = 63/114 (55%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M R+ VYHG+ +G+VEIY +DL K IRI HFSQP
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKKN-----------------IDL----KEIRISHFSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMESS S++ L LHS+C+RENK
Sbjct: 40 SERCPPLAVLHTITSFGICFKMESS------TSQTRQQQDVLFHLHSSCIRENK 87
>ref|XP_004293503.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Fragaria vesca subsp. vesca]
Length = 955
Score = 80.5 bits (197), Expect = 4e-13
Identities = 49/109 (44%), Positives = 62/109 (56%)
Frame = -2
Query: 328 VYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQPSERCP 149
VY G+ LLG+VE+Y + D L K IRI HFSQ SERCP
Sbjct: 5 VYKGEELLGEVEVYPEELNNKK--------------IWDEL---KEIRISHFSQSSERCP 47
Query: 148 PLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
P+AVL+TI+S G+C KMES ++S S TS L +LHS+C+ ENK
Sbjct: 48 PVAVLHTISSNGVCFKMESK-----SSSSSSQDTSRLFLLHSSCIMENK 91
>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X1 [Glycine max]
gi|571500215|ref|XP_006594604.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 1-like
isoform X2 [Glycine max]
Length = 960
Score = 80.5 bits (197), Expect = 4e-13
Identities = 50/114 (43%), Positives = 61/114 (53%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M + VYHG+ +G+V+IY +DL K IRI HFSQP
Sbjct: 1 MPTSMVYHGEMAVGEVKIYPEENKN-----------------MDL----KEIRISHFSQP 39
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMESS S+ L LHS+C+RENK
Sbjct: 40 SERCPPLAVLHTITSFGICFKMESS------TSQKRQQQDALFHLHSSCIRENK 87
>gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Morus
notabilis]
Length = 998
Score = 79.3 bits (194), Expect = 8e-13
Identities = 53/115 (46%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY G LLG+VEIY ++ DL K IRI HFS P
Sbjct: 1 MYKSVVYKGKELLGEVEIYPGENNIDHR------------IIDDL----KEIRISHFSPP 44
Query: 163 SERCPPLAVLYTIASG-GLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPPLAVL+TI S G+C KMES S S D SPL +LHS+C+ ENK
Sbjct: 45 SERCPPLAVLHTITSSFGVCFKMESK------TSHSQD--SPLFLLHSSCVMENK 91
>gb|EMJ15747.1| hypothetical protein PRUPE_ppa000988mg [Prunus persica]
Length = 940
Score = 79.3 bits (194), Expect = 8e-13
Identities = 49/114 (42%), Positives = 65/114 (57%)
Frame = -2
Query: 343 MIRTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQP 164
M ++ VY G+ LLG+VEIY +L+ K IRI +FSQ
Sbjct: 1 MYKSVVYKGEELLGEVEIYPEENENKNKNK-------------NLVDELKEIRISYFSQS 47
Query: 163 SERCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
SERCPP+AVL+TI+S G+C KMES S+S D +PL +LHS+C+ ENK
Sbjct: 48 SERCPPVAVLHTISSHGVCFKMESK------TSQSQD--TPLFLLHSSCVMENK 93
>ref|XP_006413749.1| hypothetical protein EUTSA_v10024324mg [Eutrema salsugineum]
gi|557114919|gb|ESQ55202.1| hypothetical protein
EUTSA_v10024324mg [Eutrema salsugineum]
Length = 963
Score = 78.6 bits (192), Expect = 1e-12
Identities = 47/112 (41%), Positives = 61/112 (54%)
Frame = -2
Query: 337 RTAVYHGDNLLGDVEIYXXXXXXXXXXXXXXXXXSKVVVVLDLLMRDKRIRIDHFSQPSE 158
R VYH D +G++EIY K V+ + IRI HFSQPSE
Sbjct: 6 RVEVYHEDGRVGELEIYPPTESQQQQEDDVTKQRKKKVMEQVKM----GIRISHFSQPSE 61
Query: 157 RCPPLAVLYTIASGGLCLKMESSDYDHCTNSRSLDATSPLSVLHSTCLRENK 2
RCPPLAVL T++S GLC K+E+S + A PLS+ +S+CLR+NK
Sbjct: 62 RCPPLAVLTTVSSCGLCFKLEAS---------ASPAQEPLSLFYSSCLRDNK 104