BLASTX nr result
ID: Rheum21_contig00020404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00020404
(467 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEF32109.1| flowering locus T [Guzmania hybrid cultivar] 85 9e-15
gb|ADW76861.1| flowering locus T [Cymbidium faberi] 85 9e-15
gb|ADI58462.1| flowering locus T [Cymbidium goeringii] gi|306489... 85 9e-15
gb|ACC59806.1| flowering locus T [Oncidium hybrid cultivar] 85 9e-15
ref|XP_006353262.1| PREDICTED: protein FLOWERING LOCUS T-like [S... 85 1e-14
gb|AFI24611.1| flowering locus T protein [Ananas comosus] 85 1e-14
dbj|BAD02371.1| flowering locus T [Populus nigra] gi|48474219|db... 85 1e-14
ref|XP_002311264.1| flowering locus T family protein [Populus tr... 85 1e-14
gb|ADU15498.1| flowering locus T-like protein [Ananas comosus] 85 1e-14
gb|AEK26568.1| flowering locus 1 [Populus tremula] gi|340007727|... 85 1e-14
gb|AEK26566.1| flowering locus 1 [Populus tremula] 85 1e-14
gb|AEK06097.1| flowering locus t [Populus balsamifera] gi|339778... 85 1e-14
gb|ABD52003.1| flowering locus T-like protein FT1 [Populus tremu... 85 1e-14
dbj|BAO03057.1| Hd3a [Oryza rufipogon] 84 1e-14
dbj|BAO03056.1| Hd3a [Oryza rufipogon] 84 1e-14
dbj|BAO03055.1| Hd3a [Oryza rufipogon] 84 1e-14
dbj|BAO03050.1| Hd3a [Oryza rufipogon] 84 1e-14
dbj|BAO02994.1| Hd3a [Oryza sativa Indica Group] 84 1e-14
dbj|BAO02982.1| Hd3a [Oryza rufipogon] gi|554619781|dbj|BAO02985... 84 1e-14
dbj|BAO02930.1| Hd3a [Oryza rufipogon] 84 1e-14
>gb|AEF32109.1| flowering locus T [Guzmania hybrid cultivar]
Length = 89
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
IVF LF Q+G +++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 32 IVFVLFQQLG-QQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRMQ 88
>gb|ADW76861.1| flowering locus T [Cymbidium faberi]
Length = 176
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
VF LF Q+G R++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 120 VFVLFHQLG-RQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQREAGSGGRRMQ 175
>gb|ADI58462.1| flowering locus T [Cymbidium goeringii] gi|306489666|gb|ADM94276.1|
flowering locus T [Cymbidium ensifolium]
gi|330688013|gb|AEC32840.1| flowering locus T [Cymbidium
sinense] gi|330688015|gb|AEC32841.1| flowering locus T
[Cymbidium goeringii]
Length = 176
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
VF LF Q+G R++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 120 VFVLFHQLG-RQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQREAGSGGRRMQ 175
>gb|ACC59806.1| flowering locus T [Oncidium hybrid cultivar]
Length = 176
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
VF LF Q+G R++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 120 VFVLFHQLG-RQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQREAGSGGRRMQ 175
>ref|XP_006353262.1| PREDICTED: protein FLOWERING LOCUS T-like [Solanum tuberosum]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
IVF+LF Q+G R++V P R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR E
Sbjct: 121 IVFSLFRQLG-RETVYAPNWRQNFNTRQFAELYNLGSPVAAVYFNCQRENGTGGRRCE 177
>gb|AFI24611.1| flowering locus T protein [Ananas comosus]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
IVF LF Q+G ++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 120 IVFVLFQQLG-HQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRMQ 176
>dbj|BAD02371.1| flowering locus T [Populus nigra] gi|48474219|dbj|BAD08336.2|
flowering locus T [Populus nigra]
gi|169990904|dbj|BAG12901.1| FLOWERING LOCUS T [Populus
nigra] gi|169990906|dbj|BAG12902.1| FLOWERING LOCUS T
[Populus nigra] gi|169990910|dbj|BAG12904.1| FLOWERING
LOCUS T [Populus nigra]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 120 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 173
>ref|XP_002311264.1| flowering locus T family protein [Populus trichocarpa]
gi|38304185|dbj|BAD01576.1| flowering locus T [Populus
nigra] gi|222851084|gb|EEE88631.1| flowering locus T
family protein [Populus trichocarpa]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 120 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 173
>gb|ADU15498.1| flowering locus T-like protein [Ananas comosus]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRLE 292
IVF LF Q+G ++V PG R NFNTR+FAE++NLGSPVAAVYFNCQRE G GGRR++
Sbjct: 120 IVFVLFQQLG-HQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGTGGRRMQ 176
>gb|AEK26568.1| flowering locus 1 [Populus tremula] gi|340007727|gb|AEK26569.1|
flowering locus 1 [Populus tremula]
Length = 79
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 25 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 78
>gb|AEK26566.1| flowering locus 1 [Populus tremula]
Length = 87
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 33 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 86
>gb|AEK06097.1| flowering locus t [Populus balsamifera] gi|339778433|gb|AEK06098.1|
flowering locus t [Populus balsamifera]
gi|339778435|gb|AEK06099.1| flowering locus t [Populus
balsamifera] gi|339778437|gb|AEK06100.1| flowering locus
t [Populus balsamifera] gi|339778439|gb|AEK06101.1|
flowering locus t [Populus balsamifera]
gi|339778441|gb|AEK06102.1| flowering locus t [Populus
balsamifera] gi|339778443|gb|AEK06103.1| flowering locus
t [Populus balsamifera] gi|339778445|gb|AEK06104.1|
flowering locus t [Populus balsamifera]
gi|339778447|gb|AEK06105.1| flowering locus t [Populus
balsamifera] gi|339778449|gb|AEK06106.1| flowering locus
t [Populus balsamifera] gi|339778451|gb|AEK06107.1|
flowering locus t [Populus balsamifera]
gi|339778453|gb|AEK06108.1| flowering locus t [Populus
balsamifera] gi|339778455|gb|AEK06109.1| flowering locus
t [Populus balsamifera] gi|339778457|gb|AEK06110.1|
flowering locus t [Populus balsamifera]
gi|339778459|gb|AEK06111.1| flowering locus t [Populus
balsamifera] gi|339778461|gb|AEK06112.1| flowering locus
t [Populus balsamifera] gi|339778463|gb|AEK06113.1|
flowering locus t [Populus balsamifera]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 120 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 173
>gb|ABD52003.1| flowering locus T-like protein FT1 [Populus tremula]
gi|407355012|gb|AFU08239.1| flowering locus T [Populus
tomentosa]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -3
Query: 462 VFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRR 298
VF LF Q+G R++V PG R NFNTR+FAEV+NLGSPVAAVYFNCQRE G GGRR
Sbjct: 120 VFVLFRQLG-RQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRR 173
>dbj|BAO03057.1| Hd3a [Oryza rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRRI 177
>dbj|BAO03056.1| Hd3a [Oryza rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQRETGSGGRRI 177
>dbj|BAO03055.1| Hd3a [Oryza rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQRESGSGGRRI 177
>dbj|BAO03050.1| Hd3a [Oryza rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRRI 177
>dbj|BAO02994.1| Hd3a [Oryza sativa Indica Group]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRRI 177
>dbj|BAO02982.1| Hd3a [Oryza rufipogon] gi|554619781|dbj|BAO02985.1| Hd3a [Oryza
rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQRESGSGGRRI 177
>dbj|BAO02930.1| Hd3a [Oryza rufipogon]
Length = 179
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 465 IVFALFPQMGGRKSVLGPGRRHNFNTREFAEVFNLGSPVAAVYFNCQRERGHGGRRL 295
+VF LF Q+G R++V PG R NFNT++FAE++NLGSPVAAVYFNCQRE G GGRR+
Sbjct: 122 LVFVLFQQLG-RQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRRI 177