BLASTX nr result

ID: Rheum21_contig00020393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020393
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234487.1| PREDICTED: probable dolichyl-diphosphooligos...    56   6e-06
ref|XP_006343298.1| PREDICTED: probable dolichyl-diphosphooligos...    55   7e-06

>ref|XP_004234487.1| PREDICTED: probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B-like [Solanum
           lycopersicum]
          Length = 340

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +1

Query: 196 SSASDADFVAELISLRSNSPAGVIRVSDHLLRRIMSV-SRRSFSFAV 333
           SS+S  D + ELI+LRS SP GVI +SDHLLRRI+S  S RSFSF +
Sbjct: 24  SSSSHEDLLPELINLRSQSPTGVIHLSDHLLRRILSAKSPRSFSFLI 70


>ref|XP_006343298.1| PREDICTED: probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B-like [Solanum tuberosum]
          Length = 340

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +1

Query: 196 SSASDADFVAELISLRSNSPAGVIRVSDHLLRRIMSV-SRRSFSFAV 333
           SS+SD D + ELI+LRS +P GVI +SDHLLRRI+S  S R FSF +
Sbjct: 24  SSSSDEDLLPELINLRSQTPTGVIHLSDHLLRRILSAKSPRPFSFLI 70


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