BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020261
         (681 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   325   6e-87
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   323   4e-86
ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Caps...   322   5e-86
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        322   7e-86
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   322   7e-86
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   321   1e-85
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   321   1e-85
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   320   2e-85
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr...   320   2e-85
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   320   3e-85
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              320   3e-85
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   319   4e-85
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           319   6e-85
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   317   2e-84
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           317   3e-84
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   316   4e-84
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   316   5e-84
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   315   6e-84
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   313   4e-83
dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare]    312   5e-83

>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  325 bits (834), Expect = 6e-87
 Identities = 156/202 (77%), Positives = 178/202 (88%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EKEG+I APL KVLLD+GKTERVI++H SGL++SQ+AIT+YR+LGPTIN
Sbjct: 272 RYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAITQYRVLGPTIN 331

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK +  VD+EPTSG PYK
Sbjct: 332 GCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGLPYK 391

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRPAGLDVQKGSVLSKVPLLHLHCRELV+PN+AK L     +  +  P   +S  P+++
Sbjct: 392 LRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLHP--AVSSKPDIL 449

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMPSHMKISWNLMSSYLV
Sbjct: 450 RFVASMPSHMKISWNLMSSYLV 471


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  323 bits (827), Expect = 4e-86
 Identities = 154/202 (76%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEG+ISAPL KVLLDDGKT+RV+++ GSG ++SQEAITEYR+LGP IN
Sbjct: 277 QYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQEAITEYRVLGPMIN 336

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGT IVGDYKYGWFVHKRWK + QVDIEPT+G PYK
Sbjct: 337 GCSWLELRPITSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 396

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRE+V+PN+AK L     +  T   R  +   P+L+
Sbjct: 397 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQ-ETEPLRTGIIDKPDLL 455

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMPSHMKISWNLMSSYLV
Sbjct: 456 RFVASMPSHMKISWNLMSSYLV 477


>ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Capsella rubella]
           gi|482569081|gb|EOA33269.1| hypothetical protein
           CARUB_v10022381mg [Capsella rubella]
          Length = 478

 Score =  322 bits (826), Expect = 5e-86
 Identities = 155/203 (76%), Positives = 177/203 (87%), Gaps = 1/203 (0%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEG+ISAPL KVLLDDGKT+RV+++ GS  ++SQEAITEYR+LGP IN
Sbjct: 278 QYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSCFEASQEAITEYRVLGPMIN 337

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVHKRWK + QVDIEPT+G PYK
Sbjct: 338 GCSWLELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 397

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQP-RLRLSHNPEL 144
           LRRP GLDVQKGSVLSKVPLLHLHCRE+V+PN+AK L     + A  +P R  +   P+L
Sbjct: 398 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQEA--EPIRTGIIDKPDL 455

Query: 143 VRFVASMPSHMKISWNLMSSYLV 75
           +RFVASMPSHMKISWNLMSSYLV
Sbjct: 456 LRFVASMPSHMKISWNLMSSYLV 478


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  322 bits (825), Expect = 7e-86
 Identities = 152/202 (75%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEG+ISAPL KVLLDDGKT+RV+++ GSG ++SQ+AITEY++LGP IN
Sbjct: 126 QYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKIN 185

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVHKRWK + QVDIEPT+G PYK
Sbjct: 186 GCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 245

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRE+V+PN+AK L     +  T      +   P+L+
Sbjct: 246 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQ-ETEPLHTGIIDKPDLL 304

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMPSHMKISWNLMSSYLV
Sbjct: 305 RFVASMPSHMKISWNLMSSYLV 326


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  322 bits (825), Expect = 7e-86
 Identities = 152/202 (75%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEG+ISAPL KVLLDDGKT+RV+++ GSG ++SQ+AITEY++LGP IN
Sbjct: 278 QYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKIN 337

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVHKRWK + QVDIEPT+G PYK
Sbjct: 338 GCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYK 397

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRE+V+PN+AK L     +  T      +   P+L+
Sbjct: 398 LRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQ-ETEPLHTGIIDKPDLL 456

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMPSHMKISWNLMSSYLV
Sbjct: 457 RFVASMPSHMKISWNLMSSYLV 478


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  321 bits (823), Expect = 1e-85
 Identities = 154/203 (75%), Positives = 173/203 (85%), Gaps = 1/203 (0%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EK+GII APL KVLLDDGKTER+I++  SGL++SQEA+TEYR+LGP IN
Sbjct: 269 RYWALVIGSPREKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMTEYRVLGPMIN 328

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP T +KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VDIEPTSG PYK
Sbjct: 329 GCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYK 388

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLS-HNPEL 144
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK +     +     P L      P+L
Sbjct: 389 LRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDNLFPTLSSKPDGPDL 448

Query: 143 VRFVASMPSHMKISWNLMSSYLV 75
           +RFVASMPSHMKISWNLMSSYLV
Sbjct: 449 LRFVASMPSHMKISWNLMSSYLV 471


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  321 bits (823), Expect = 1e-85
 Identities = 154/202 (76%), Positives = 173/202 (85%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           R+WALVIG P+EKEG+I APL K+LLDDGKTERVI++   GL++SQEAITEYR+LGP IN
Sbjct: 272 RFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAITEYRVLGPMIN 331

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VDIEPT+G PYK
Sbjct: 332 GCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYK 391

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK L        T  P   LS  P+L+
Sbjct: 392 LRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNKNTETLPP--ALSMKPDLL 449

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA+MP HMKISWNLMSSYLV
Sbjct: 450 RFVATMPKHMKISWNLMSSYLV 471


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  320 bits (821), Expect = 2e-85
 Identities = 154/203 (75%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EK+GII APL KVLLDDGKTER+I++  SGL++SQEA+TEYR+LGP IN
Sbjct: 269 RYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMIN 328

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP T +KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VDIEPTSG PYK
Sbjct: 329 GCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYK 388

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLS-HNPEL 144
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK       +     P L      P+L
Sbjct: 389 LRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPTLSSKPDGPDL 448

Query: 143 VRFVASMPSHMKISWNLMSSYLV 75
           +RFVASMPSHMKISWNLMSSYLV
Sbjct: 449 LRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538601|gb|ESR49645.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 343

 Score =  320 bits (821), Expect = 2e-85
 Identities = 154/203 (75%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EK+GII APL KVLLDDGKTER+I++  SGL++SQEA+TEYR+LGP IN
Sbjct: 141 RYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMIN 200

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP T +KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VDIEPTSG PYK
Sbjct: 201 GCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYK 260

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLS-HNPEL 144
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK       +     P L      P+L
Sbjct: 261 LRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPTLSSKPDGPDL 320

Query: 143 VRFVASMPSHMKISWNLMSSYLV 75
           +RFVASMPSHMKISWNLMSSYLV
Sbjct: 321 LRFVASMPSHMKISWNLMSSYLV 343


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  320 bits (820), Expect = 3e-85
 Identities = 150/202 (74%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P++KEG+I APL KVLLDDGKTERVI+++ SGL++SQEAITEYR+LGP IN
Sbjct: 278 RYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMIN 337

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIEL P TS+KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VD+EPT+G PYK
Sbjct: 338 GCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYK 397

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           +RRP GLDVQKGSVLSKVPLLHLHCREL++PN+AK L     +        +LS  P+++
Sbjct: 398 MRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDIL 457

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMP+HMKISWNLMSSYLV
Sbjct: 458 RFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  320 bits (820), Expect = 3e-85
 Identities = 150/202 (74%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P++KEG+I APL KVLLDDGKTERVI+++ SGL++SQEAITEYR+LGP IN
Sbjct: 280 RYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMIN 339

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIEL P TS+KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK + +VD+EPT+G PYK
Sbjct: 340 GCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYK 399

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           +RRP GLDVQKGSVLSKVPLLHLHCREL++PN+AK L     +        +LS  P+++
Sbjct: 400 MRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDIL 459

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMP+HMKISWNLMSSYLV
Sbjct: 460 RFVASMPNHMKISWNLMSSYLV 481


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
           gi|557086377|gb|ESQ27229.1| hypothetical protein
           EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  319 bits (818), Expect = 4e-85
 Identities = 151/203 (74%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P++KEG+ISAP+ KVLLDDGKT+RV+++ GSG ++SQEAITEYR+LGP IN
Sbjct: 278 QYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAITEYRVLGPMIN 337

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVHK+WK + QVDIEPTSG PYK
Sbjct: 338 GCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVDIEPTSGKPYK 397

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLR-STGSEGATYQPRLRLSHNPEL 144
           LRRP GLD+QKGSVLSKVPLLHLHCRE+V+PN+AK L      E  +  P   +   P+L
Sbjct: 398 LRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNNQEIDSLHP--GIISKPDL 455

Query: 143 VRFVASMPSHMKISWNLMSSYLV 75
           +RFVASMPSHMKISWN+MSSYLV
Sbjct: 456 LRFVASMPSHMKISWNIMSSYLV 478


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  319 bits (817), Expect = 6e-85
 Identities = 153/202 (75%), Positives = 172/202 (85%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEGII APL KVLL+DGKTERVI++H +G  +SQEAITEYR+LGP IN
Sbjct: 250 KYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMIN 309

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGWFVHKRWK + QV+IEPT+G PYK
Sbjct: 310 GCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVNIEPTTGKPYK 369

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSV+SKVPLLHL CRELV+PN+AK LR    +     P   L   P+L+
Sbjct: 370 LRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSQNQDP--ALESKPDLL 427

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA MPSHMKISWNLMSSYLV
Sbjct: 428 RFVARMPSHMKISWNLMSSYLV 449


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  317 bits (812), Expect = 2e-84
 Identities = 152/202 (75%), Positives = 172/202 (85%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EKEG+I APL KVLL+DGKTERV+++  SGL++SQEA+TEYR+LGP IN
Sbjct: 269 RYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRIN 328

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP TS+KHQLRVHCAEALGTPIVGDYKYGW VH+RWK + +VDIEP SG PYK
Sbjct: 329 GCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYK 388

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRPAGLDVQKGSVLSKVPLLHLHCRE V+PN+AK L     +     P   L   P+L+
Sbjct: 389 LRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIHP--ALDAKPDLL 446

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVASMP+HMKISWNLMSSYLV
Sbjct: 447 RFVASMPTHMKISWNLMSSYLV 468


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  317 bits (811), Expect = 3e-84
 Identities = 152/202 (75%), Positives = 171/202 (84%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEGII APL KVLL+DGKTERVI++H +G  +SQEAITEYR+LGP IN
Sbjct: 250 KYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMIN 309

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP TS+KHQLRVHCAEALGTPIVGDYKYGW VHKRWK + QV+IEPT+G PYK
Sbjct: 310 GCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVNIEPTTGKPYK 369

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSV+SKVPLLHL CRELV+PN+AK LR    +     P   L   P+L+
Sbjct: 370 LRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVFDRKSENQDP--ALESKPDLL 427

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA MPSHMKISWNLMSSYLV
Sbjct: 428 RFVARMPSHMKISWNLMSSYLV 449


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  316 bits (810), Expect = 4e-84
 Identities = 150/202 (74%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIGCP+E+EG+ISAPL KVLLDDGKTERVI+++ + +++SQEAITEYR+LGPTIN
Sbjct: 273 KYWALVIGCPREREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGPTIN 332

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIEL P TS+KHQLR+HCAEALGTPIVGDYKYGWFVH+RWK + +VD+EP SG PYK
Sbjct: 333 GCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYK 392

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK L     +G     R   S + +L+
Sbjct: 393 LRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPN---RPVSSFDSDLL 449

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA MPSHM+ISWNLMSSYLV
Sbjct: 450 RFVARMPSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  316 bits (809), Expect = 5e-84
 Identities = 149/202 (73%), Positives = 175/202 (86%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIGCP+E+EG+ISAPL KVLLDDGKTERV++++ + +++SQEAITEYR+LGPTIN
Sbjct: 273 KYWALVIGCPREREGVISAPLSKVLLDDGKTERVVLANKASIEASQEAITEYRVLGPTIN 332

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIEL P TS+KHQLR+HCAEALGTPIVGDYKYGWFVH+RWK + +VD+EP SG PYK
Sbjct: 333 GCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYK 392

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCRELV+PN+AK L     +G     R   S + +L+
Sbjct: 393 LRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPN---RPVSSFDSDLL 449

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA MPSHM+ISWNLMSSYLV
Sbjct: 450 RFVARMPSHMRISWNLMSSYLV 471


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
           surA-hepA intergenic region yab0 from Escherichia coli
           genome gb|AE000116, and to hypothetical YABO family
           PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  315 bits (808), Expect = 6e-84
 Identities = 152/208 (73%), Positives = 175/208 (84%), Gaps = 6/208 (2%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           +YWALVIG P+EKEG+ISAPL KVLLDDGKT+RV+++ GSG ++SQ+AITEY++LGP IN
Sbjct: 285 QYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKIN 344

Query: 500 GCSWIELRPHTSQKHQ------LRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPT 339
           GCSW+ELRP TS+KHQ      LRVHCAEALGTPIVGDYKYGWFVHKRWK + QVDIEPT
Sbjct: 345 GCSWVELRPITSRKHQPPSKKQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPT 404

Query: 338 SGDPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLS 159
           +G PYKLRRP GLDVQKGSVLSKVPLLHLHCRE+V+PN+AK L     +  T      + 
Sbjct: 405 TGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQ-ETEPLHTGII 463

Query: 158 HNPELVRFVASMPSHMKISWNLMSSYLV 75
             P+L+RFVASMPSHMKISWNLMSSYLV
Sbjct: 464 DKPDLLRFVASMPSHMKISWNLMSSYLV 491


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X1 [Cicer arietinum]
          Length = 479

 Score =  313 bits (801), Expect = 4e-83
 Identities = 148/202 (73%), Positives = 169/202 (83%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P+EKEGII APL KVLL+DGKTERVI++H S ++  QEA+TEYR+LGP IN
Sbjct: 280 RYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVTEYRVLGPKIN 339

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSW+ELRP T +KHQLRVHCAEALGTPIVGDYKYGWFVH RWK + +VDIEPT+G PYK
Sbjct: 340 GCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYK 399

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GLDVQKGSVLSKVPLLHLHCREL +PN+AK L           P L L   P+++
Sbjct: 400 LRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIAKFLNVLEKSSQQLDPSLSL--QPDVL 457

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RFVA+MP+HM+ISWNLMSSYLV
Sbjct: 458 RFVATMPNHMRISWNLMSSYLV 479


>dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 357

 Score =  312 bits (800), Expect = 5e-83
 Identities = 147/202 (72%), Positives = 169/202 (83%)
 Frame = -2

Query: 680 RYWALVIGCPQEKEGIISAPLMKVLLDDGKTERVIISHGSGLDSSQEAITEYRMLGPTIN 501
           RYWALVIG P E EG+ISAPL KVLLDDGK ERVI++H SG+D +QEA+TEYR++GPTIN
Sbjct: 158 RYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHPSGIDGAQEAVTEYRVMGPTIN 217

Query: 500 GCSWIELRPHTSQKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKHIAQVDIEPTSGDPYK 321
           GCSWIELRP T +KHQLRVHCAEALGTPIVGDYKYGWFVH+RWK   Q D EP +G+PYK
Sbjct: 218 GCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYK 277

Query: 320 LRRPAGLDVQKGSVLSKVPLLHLHCRELVMPNVAKLLRSTGSEGATYQPRLRLSHNPELV 141
           LRRP GL+VQKGSVLSKVPLLHLHCRE+V+PN+AK L +TG       P  +    P L+
Sbjct: 278 LRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSNTGEWHDNGTPWSK--EKPNLL 335

Query: 140 RFVASMPSHMKISWNLMSSYLV 75
           RF+A MP+HMKISWN+MSSYLV
Sbjct: 336 RFIAPMPAHMKISWNIMSSYLV 357