BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020241
         (241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19935.1| coat protein [Nandina mosaic virus]                    149   3e-34
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]         145   5e-33
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]...   144   9e-33
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi...   144   9e-33
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]          144   2e-32
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]         140   2e-31
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA...   135   4e-30
gb|AAW30636.1| coat protein [Tulip virus X]                           135   4e-30
gb|ACE62921.1| coat protein [Tulip virus X]                           130   2e-28
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7...    99   6e-19
gb|ADE10206.1| coat protein [Hydrangea ringspot virus]                 97   3e-18
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679...    97   3e-18
gb|AFU63340.1| coat protein [Alternanthera mosaic virus]               87   3e-15
gb|AFB81318.1| coat protein [Alternanthera mosaic virus]               86   4e-15
dbj|BAJ17501.1| coat protein [Lagenaria mild mosaic virus]             85   9e-15
ref|YP_459948.1| coat protein [Alternanthera mosaic virus] gi|62...    85   1e-14
gb|AFU63337.1| coat protein [Alternanthera mosaic virus]               85   1e-14
gb|AFB81324.1| coat protein [Alternanthera mosaic virus]               85   1e-14
ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345...    85   1e-14
gb|AAX86015.1| coat protein [Alternanthera mosaic virus] gi|6254...    85   1e-14

>gb|AAX19935.1| coat protein [Nandina mosaic virus]
          Length = 207

 Score =  149 bits (377), Expect = 3e-34
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEPLGG+SRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LS+TAPQVQFLPAPSD
Sbjct: 192 LSSTAPQVQFLPAPSD 207


>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  145 bits (366), Expect = 5e-33
 Identities = 70/76 (92%), Positives = 76/76 (100%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA++SNLASTSTQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNLASTSTQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNTAPQVQFLP+PSD
Sbjct: 192 LSNTAPQVQFLPSPSD 207


>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
           gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|311649|emb|CAA79765.1| capsid protein [Plantago
           asiatica mosaic virus]
          Length = 207

 Score =  144 bits (364), Expect = 9e-33
 Identities = 72/76 (94%), Positives = 74/76 (97%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEP GG+SRTPTPDEVTANETARSLNLFEARA+ SNLASTSTQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNLASTSTQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNTAPQVQFLPAPSD
Sbjct: 192 LSNTAPQVQFLPAPSD 207


>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
           gi|169219481|dbj|BAG12132.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
           protein [Plantago asiatica mosaic virus]
           gi|169219499|dbj|BAG12147.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
           protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  144 bits (364), Expect = 9e-33
 Identities = 70/76 (92%), Positives = 75/76 (98%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNLASTSTQFTRG 
Sbjct: 132 FDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNLASTSTQFTRGH 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNTAPQVQFLP+PSD
Sbjct: 192 LSNTAPQVQFLPSPSD 207


>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/76 (90%), Positives = 76/76 (100%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEPLGG++RTPTPDEVTANETARSLNLFEARA++SNLASTSTQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNLASTSTQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LS+TAPQ+QFLP+PSD
Sbjct: 192 LSSTAPQIQFLPSPSD 207


>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/76 (89%), Positives = 73/76 (96%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FD FDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNLASTSTQFTRG 
Sbjct: 132 FDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNLASTSTQFTRGH 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNTAPQ QFLP+PSD
Sbjct: 192 LSNTAPQAQFLPSPSD 207


>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
           protein [Tulip virus X]
          Length = 207

 Score =  135 bits (341), Expect = 4e-30
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS+NLA+TSTQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNLATTSTQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNT+P VQFLP+P D
Sbjct: 192 LSNTSPTVQFLPSPED 207


>gb|AAW30636.1| coat protein [Tulip virus X]
          Length = 157

 Score =  135 bits (341), Expect = 4e-30
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS+NLA+TSTQFTRGQ
Sbjct: 82  FDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNLATTSTQFTRGQ 141

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNT+P VQFLP+P D
Sbjct: 142 LSNTSPTVQFLPSPED 157


>gb|ACE62921.1| coat protein [Tulip virus X]
          Length = 207

 Score =  130 bits (327), Expect = 2e-28
 Identities = 61/76 (80%), Positives = 71/76 (93%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS++LA+T+TQFTRGQ
Sbjct: 132 FDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSLATTATQFTRGQ 191

Query: 60  LSNTAPQVQFLPAPSD 13
           LSNT+P VQ+LP P D
Sbjct: 192 LSNTSPTVQYLPNPED 207


>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
           coat protein [Cassava common mosaic virus]
           gi|1587827|prf||2207297E ORF 5
          Length = 229

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 47/71 (66%), Positives = 59/71 (83%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG++N AALEP GG+ R PTP E+ A ETARSLNLFEA++  +NLA+ +TQ TRG+
Sbjct: 154 FDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLATNATQVTRGR 213

Query: 60  LSNTAPQVQFL 28
           LS++ PQVQFL
Sbjct: 214 LSSSEPQVQFL 224


>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
          Length = 225

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+LN A+L+P  G+ R PT  E  AN TA+SL+LFEA    SNLAST+TQFTRG+
Sbjct: 151 FDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQRSNLASTATQFTRGR 210

Query: 60  LSNTAPQVQFLPAP 19
           L++T+P +QFLPAP
Sbjct: 211 LTDTSPTIQFLPAP 224


>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
           coat protein [Hydrangea ringspot virus]
          Length = 225

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+LN A+L+P  G+ R PT  E  AN TA+SL+LFEA    SNLAST+TQFTRG+
Sbjct: 151 FDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQRSNLASTATQFTRGR 210

Query: 60  LSNTAPQVQFLPAP 19
           L++T+P +QFLPAP
Sbjct: 211 LTDTSPTIQFLPAP 224


>gb|AFU63340.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/74 (54%), Positives = 54/74 (72%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +NLAS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPNIQYLPPP 206


>gb|AFB81318.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/74 (54%), Positives = 54/74 (72%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +NLAS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPTIQYLPPP 206


>dbj|BAJ17501.1| coat protein [Lagenaria mild mosaic virus]
          Length = 208

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/74 (52%), Positives = 54/74 (72%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P  G+ R+PT +E  AN T + +NLF+A A  +N AS S+  TRGQ
Sbjct: 134 FDFFDGVENPAAMQPPQGLIRSPTQEERIANHTNKQVNLFQAAAQDNNFASNSSFITRGQ 193

Query: 60  LSNTAPQVQFLPAP 19
           LS ++P +Q+LP P
Sbjct: 194 LSTSSPTIQYLPPP 207


>ref|YP_459948.1| coat protein [Alternanthera mosaic virus]
           gi|62082371|gb|AAX62023.1| coat protein [Alternanthera
           mosaic virus] gi|62546293|gb|AAX86018.1| coat protein
           [Alternanthera mosaic virus]
          Length = 207

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +N AS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPTIQYLPPP 206


>gb|AFU63337.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +N AS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAARDNNFASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPTIQYLPPP 206


>gb|AFB81324.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +N AS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPTIQYLPPP 206


>ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345548101|gb|AEO12144.1|
           coat protein [Tamus red mosaic virus]
          Length = 221

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ N  +++P GG+ R PT  E  AN TAR+L LFEA A  + +AS S  +T+G+
Sbjct: 147 FDFFDGVENVGSIKPPGGLIRKPTDKERIANATARALKLFEAAAQQNRMASNSVHYTQGR 206

Query: 60  LSNTAPQVQFLPAP 19
            S+TAPQ+QFLP P
Sbjct: 207 YSDTAPQIQFLPDP 220


>gb|AAX86015.1| coat protein [Alternanthera mosaic virus]
           gi|62546301|gb|AAX86024.1| coat protein [Alternanthera
           mosaic virus] gi|239819298|gb|ACS28232.1| coat protein
           [Alternanthera mosaic virus] gi|239819304|gb|ACS28237.1|
           coat protein [Alternanthera mosaic virus]
          Length = 207

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = -2

Query: 240 FDFFDGLLNPAALEPLGGVSRTPTPDEVTANETARSLNLFEARANSSNLASTSTQFTRGQ 61
           FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +N AS S   T+GQ
Sbjct: 133 FDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNFASNSAFITKGQ 192

Query: 60  LSNTAPQVQFLPAP 19
           LS+ +P +Q+LP P
Sbjct: 193 LSSNSPTIQYLPPP 206