BLASTX nr result

ID: Rheum21_contig00020194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00020194
         (247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD05854.1| putative ATP synthase epsilon chain, mitochondri...    61   2e-07
gb|EXC31003.1| ATP synthase subunit epsilon [Morus notabilis]          57   2e-06
ref|XP_006362106.1| PREDICTED: ATP synthase subunit epsilon, mit...    56   4e-06
ref|XP_006342867.1| PREDICTED: ATP synthase subunit epsilon, mit...    55   1e-05

>dbj|BAD05854.1| putative ATP synthase epsilon chain, mitochondrial [Oryza sativa
           Japonica Group]
          Length = 104

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -3

Query: 245 EPHRSEALSKEKVHYAISKWEDGKPQKPNLGFMDRRDRG 129
           EPH+SEA S+EKVH+AISKW DGK +KPNLG ++ R  G
Sbjct: 35  EPHKSEAASREKVHFAISKWADGKQEKPNLGSVESRKDG 73


>gb|EXC31003.1| ATP synthase subunit epsilon [Morus notabilis]
          Length = 287

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 245 EPHRSEALSKEKVHYAISKWEDGKPQKP 162
           EPH+SEALS+EKVH+A+SKW DGKPQKP
Sbjct: 34  EPHKSEALSREKVHFAVSKWADGKPQKP 61


>ref|XP_006362106.1| PREDICTED: ATP synthase subunit epsilon, mitochondrial-like
           [Solanum tuberosum]
          Length = 70

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -3

Query: 245 EPHRSEALSKEKVHYAISKWEDGKPQKPNL 156
           EP+++EALS+EKVHY+ISKW DGKPQKP L
Sbjct: 34  EPYKAEALSREKVHYSISKWADGKPQKPTL 63


>ref|XP_006342867.1| PREDICTED: ATP synthase subunit epsilon, mitochondrial-like
           [Solanum tuberosum]
          Length = 70

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 245 EPHRSEALSKEKVHYAISKWEDGKPQKPNL 156
           EP++SEAL++EKVHY ISKW DGKPQKP +
Sbjct: 34  EPYKSEALTREKVHYTISKWADGKPQKPTI 63


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