BLASTX nr result
ID: Rheum21_contig00019590
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019590
(1167 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li... 555 e-155
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 554 e-155
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li... 553 e-155
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 553 e-155
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr... 553 e-155
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is... 552 e-155
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 550 e-154
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 549 e-154
gb|EOY16376.1| ATPase family associated with various cellular ac... 545 e-152
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V... 535 e-149
gb|AFK40832.1| unknown [Lotus japonicus] 531 e-148
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li... 530 e-148
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li... 529 e-148
ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group] g... 528 e-147
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc... 528 e-147
ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-li... 528 e-147
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S... 528 e-147
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S... 526 e-147
gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii] 523 e-146
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is... 523 e-146
>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
sinensis]
Length = 342
Score = 555 bits (1430), Expect = e-155
Identities = 278/339 (82%), Positives = 299/339 (88%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQ+EVVRVLTNTLET +CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK FAAVAVGS QR G YPCPPYKIIILD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EVMSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
+LHICNEEGL+LD EAL TLS+IS+GDLRRAITYLQGA RL+G SGVIP
Sbjct: 183 VLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVIPP 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
EVV+ LFA C+SG+FD ANK+V+N+IAEGYP SL+LSQLFDV+V DISDEQKARICK
Sbjct: 243 EVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQKARICKC 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
DKCLVDGADEYLQLLD S++IRA NMPEEF YD
Sbjct: 303 LAEVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQYD 341
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 554 bits (1428), Expect = e-155
Identities = 273/337 (81%), Positives = 304/337 (90%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP++VKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
AHQLFGP+LYK RVLELNASDDRGINVVRTKIKNFAAVAVGS ++ GYPCPP+KIIILDE
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMT+DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLP+EVM SRI
Sbjct: 123 ADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEVMGSRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
LHIC EEGL+LD EAL TLS+IS+GDLRRAITYLQ A RL+G SGVIP E
Sbjct: 183 LHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIPNE 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
VVQ++F+AC+SGNFD ANK+V+NVIAEGYPVS MLSQL+D++V A DISDEQKARICKKF
Sbjct: 243 VVQAMFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARICKKF 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSY 156
ADKCLVDGADEYLQLL+ VS ++A SNMP++ ++
Sbjct: 303 AEADKCLVDGADEYLQLLNVVSSTMQALSNMPQDMAF 339
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum lycopersicum]
Length = 339
Score = 553 bits (1426), Expect = e-155
Identities = 272/337 (80%), Positives = 303/337 (89%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
AHQLFGP+LYK RVLELNASDDRGINVVRTKIKNFAAVAVGS ++ GYPCPP+KIIILDE
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMT+DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLP+E+M SRI
Sbjct: 123 ADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMGSRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
LHIC EEGL+LD EAL TLS+IS+GDLRRAITYLQ A RL+G SGVIP E
Sbjct: 183 LHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIPNE 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
VVQ++F+AC+SGNFD ANK+V+NVIAEGYPVS MLSQL+D++V A DISDEQKARICKKF
Sbjct: 243 VVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDILVDADDISDEQKARICKKF 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSY 156
ADKCLVDGADEYLQLL+ S ++A SNMP++ ++
Sbjct: 303 AEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMTF 339
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 553 bits (1426), Expect = e-155
Identities = 272/339 (80%), Positives = 305/339 (89%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++QSSQQWVEKYRP+Q+KDVAHQDEVVRVLTNTLET +CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQL+GP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVGS QR+G YPCPPYKIIILD
Sbjct: 63 AHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIIILD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLP+E+MS+R
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMSNR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
ILHICNEEGL LD EAL TLS++S+GDLRRAITYLQGA RL+G SG IP+
Sbjct: 183 ILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAIPR 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
EV ++++AACK+G+FD ANK+V++VIAEGYPVS ML+QLF+V+V DISDEQKARICK
Sbjct: 243 EVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARICKS 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
ADKCLVDGADEYLQLLD VS+ +R+ NMP+EFSYD
Sbjct: 303 LATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341
>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
gi|557536378|gb|ESR47496.1| hypothetical protein
CICLE_v10001485mg [Citrus clementina]
Length = 382
Score = 553 bits (1424), Expect = e-155
Identities = 277/339 (81%), Positives = 298/339 (87%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQ+EVVRVLTNTLET +CPHMLFYGPPGTGKTTTALAI
Sbjct: 43 PVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAI 102
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK FAAVAVGS QR G YPCPPYKIIILD
Sbjct: 103 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILD 162
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EVMSSR
Sbjct: 163 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSR 222
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
+LHICNEEGL+LD EAL TLS+IS GDLRRAITYLQGA RL+G SGVIP
Sbjct: 223 VLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITSKDLISVSGVIPP 282
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
EVV+ LFA C+SG+FD ANK+V+N+IAEGYP SL+LSQLFDV+V DISDEQ+ARICK
Sbjct: 283 EVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQQARICKC 342
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
DKCLVDGADEYLQLLD S++IRA NMPEEF YD
Sbjct: 343 LAKVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQYD 381
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
gi|302141781|emb|CBI18984.3| unnamed protein product
[Vitis vinifera]
Length = 341
Score = 552 bits (1423), Expect = e-155
Identities = 280/340 (82%), Positives = 304/340 (89%), Gaps = 1/340 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLETT+CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVGS R+G YPCPPYKIIILD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
ILHIC EE L+LD EAL TLS+IS+GDLRRAITYLQGA RL+G SGV+PQ
Sbjct: 183 ILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQ 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
VVQ+LFAACKSG+FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKARICK+
Sbjct: 243 HVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKR 301
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
ADKCLVDGADEYLQLLD S+ +RA NMPEEF +++
Sbjct: 302 LAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 550 bits (1418), Expect = e-154
Identities = 279/340 (82%), Positives = 303/340 (89%), Gaps = 1/340 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLETT+CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FA VAVGS R+G YPCPPYKIIILD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIIILD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
ILHIC EE L+LD EAL TLS+IS+GDLRRAITYLQGA RL+G SGV+PQ
Sbjct: 183 ILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQ 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
VVQ+LFAACKSG+FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKARICK+
Sbjct: 243 HVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKR 301
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
ADKCLVDGADEYLQLLD S+ +RA NMPEEF +++
Sbjct: 302 LAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 549 bits (1414), Expect = e-154
Identities = 272/340 (80%), Positives = 301/340 (88%), Gaps = 1/340 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++QSSQ WVEKYRP+QVKDVAHQ+EVVRVLTNTLET++CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIKNFAAVAVGS QR G YPCPPYKIIILD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIIILD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
+LHIC EEGL+LD EAL TLS +S+GDLRRAITYLQGA RLYG SGVIPQ
Sbjct: 183 VLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVIPQ 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
E V +L+AAC+SG+FD ANK+V+N+IAEGYPVS ML QL +V+V A DISDEQKA+ICK
Sbjct: 243 EAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQICKS 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
G ADKCLVDGADEYLQLLD S+ +RA NMP+EF Y++
Sbjct: 303 LGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342
>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
[Theobroma cacao]
Length = 345
Score = 545 bits (1403), Expect = e-152
Identities = 275/343 (80%), Positives = 304/343 (88%), Gaps = 4/343 (1%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLET++CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASD+RGINVVRTKIK+FAAVAVGS QR+G YPCPP+KIIILD
Sbjct: 63 AHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSGQRQGGYPCPPFKIIILD 122
Query: 809 EADSMTEDAQ---NALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVM 639
EADSMTEDAQ NALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFK L +E+M
Sbjct: 123 EADSMTEDAQACLNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKALSEEIM 182
Query: 638 SSRILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGV 459
S+R+LHICNEEGLHLD EAL TLS+IS+GDLRRAITYLQGA RL+G SGV
Sbjct: 183 SNRVLHICNEEGLHLDSEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLLSVSGV 242
Query: 458 IPQEVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARI 279
IPQEVV++L+AACKSGNFD ANK+V+NVIAEG+PVS MLSQLFDV+V A DI DEQKARI
Sbjct: 243 IPQEVVEALYAACKSGNFDLANKEVNNVIAEGFPVSQMLSQLFDVVVEADDIPDEQKARI 302
Query: 278 CKKFGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
CK ADK LVDGADEYLQLLD S+ +RA NMP+EF +++
Sbjct: 303 CKSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFCFES 345
>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
Length = 334
Score = 535 bits (1377), Expect = e-149
Identities = 275/340 (80%), Positives = 298/340 (87%), Gaps = 1/340 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLETT+CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFG VLELNASDDRGINVVRTKIK+FAAVAVGS R+G YPCPPYKIIILD
Sbjct: 63 AHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILD 115
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 116 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSR 175
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
ILHIC EE L+LD EAL TLS+IS+GDLRRAITYLQGA RL+G SGV+PQ
Sbjct: 176 ILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQ 235
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
VVQ+LFAACKSG+FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKARICK+
Sbjct: 236 HVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKR 294
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
ADKCLVDGADEYLQLLD S+ +RA NMPEEF +++
Sbjct: 295 LAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 334
>gb|AFK40832.1| unknown [Lotus japonicus]
Length = 342
Score = 531 bits (1368), Expect = e-148
Identities = 264/339 (77%), Positives = 295/339 (87%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P+VQSSQ WVEKYRP+QVKDVA+QDEVVRVLTNTLET SCPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+ ++G YPCPPYKII+LD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIVLD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
IL+ICNEEGLHLD E L TLS+IS+GDLRRAITYLQ + RL+G SGV+P+
Sbjct: 183 ILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVVPE 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
VV+++ ACKSGNFD ANK+V+N IAEGYP S +L+QLFD IV SD+QKARICKK
Sbjct: 243 NVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARICKK 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
G ADKCLVDGADEYLQLLD +S+ +AF +MPE SY+
Sbjct: 303 LGEADKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSYE 341
>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
max] gi|571452162|ref|XP_006578961.1| PREDICTED:
replication factor C subunit 4-like isoform X2 [Glycine
max] gi|571452164|ref|XP_006578962.1| PREDICTED:
replication factor C subunit 4-like isoform X3 [Glycine
max]
Length = 342
Score = 530 bits (1365), Expect = e-148
Identities = 267/338 (78%), Positives = 296/338 (87%), Gaps = 1/338 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++QS+Q WVEKYRP+QVKDVAHQDEVVRVLTNTLET SCPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQRE-GYPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+ QR+ GYPCPP+KII+LD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIVLD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
IL+I EEGL LD EAL TLS+IS GDLRRAITYLQ A RL+G SGV+P
Sbjct: 183 ILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPA 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
+VV+ L ACKSGNFD ANK+V+N IAEGYP S ML+QLF+ IV +D+SDEQKARI KK
Sbjct: 243 KVVEELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARISKK 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSY 156
G ADKCLVDGADEYLQLLD VS+ ++AFSNMPE F+Y
Sbjct: 303 LGEADKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 340
>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
Length = 341
Score = 529 bits (1363), Expect = e-148
Identities = 265/339 (78%), Positives = 296/339 (87%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++ SSQ WVEKYRP+QVKDVAHQ+EV+RVLTNTLET SCPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PIIPSSQPWVEKYRPKQVKDVAHQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQRE-GYPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+ QR+ GYPCPPYKII+LD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIVLD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
IL+IC EEGL+LD E L LS+IS+GDLRRAITYLQ A RL+G SGV+P
Sbjct: 183 ILYICKEEGLYLDAEGLSALSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVVPA 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
EVV++L ACKSGNFD ANK+V+N IAEGYPVS +L+QLF+ IV +DISDEQKARI KK
Sbjct: 243 EVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQILTQLFEAIVEENDISDEQKARISKK 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
G ADKCLVDGADEYLQLL VS+ I+A N+PE F+Y+
Sbjct: 303 LGEADKCLVDGADEYLQLLAVVSNTIQALCNLPEGFAYE 341
>ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
gi|75173107|sp|Q9FXM3.1|RFC2_ORYSJ RecName:
Full=Replication factor C subunit 2; Short=OsRFC2;
AltName: Full=Activator 1 subunit 2
gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa
subunit [Oryza sativa Japonica Group]
gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit,
putative, expressed [Oryza sativa Japonica Group]
gi|125535960|gb|EAY82448.1| hypothetical protein
OsI_37665 [Oryza sativa Indica Group]
gi|125578677|gb|EAZ19823.1| hypothetical protein
OsJ_35406 [Oryza sativa Japonica Group]
gi|215737297|dbj|BAG96226.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa
Japonica Group]
Length = 339
Score = 528 bits (1360), Expect = e-147
Identities = 264/333 (79%), Positives = 290/333 (87%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P+V SSQ WVEKYRPRQVKDVAHQ+EVVRVLT TL+T PHMLFYGPPGTGKTTTALAI
Sbjct: 3 PLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
A+QL+GP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVGSA++ GYPCPPYKIIILDE
Sbjct: 63 AYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EVMS+RI
Sbjct: 123 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
LHICNEEGL LD +AL TLSTIS GDLRRAITYLQ A RL+G SG IP++
Sbjct: 183 LHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIPED 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
VV+SL A+CKSG FD ANK+V+N+IA+GYPVS ++SQ DVIV A DI DEQKARICKK
Sbjct: 243 VVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICKKL 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPE 168
G ADKCLVDGADEYLQLLD S+ IRA +MP+
Sbjct: 303 GEADKCLVDGADEYLQLLDVASETIRALFDMPQ 335
>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
gi|357520353|ref|XP_003630465.1| Replication factor C
subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
Replication factor C subunit [Medicago truncatula]
gi|355524487|gb|AET04941.1| Replication factor C subunit
[Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
[Medicago truncatula]
Length = 339
Score = 528 bits (1360), Expect = e-147
Identities = 263/337 (78%), Positives = 295/337 (87%), Gaps = 1/337 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++QS+Q WVEKYRP+QVKDVAHQ+EVVRVLTNTLET SCPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQ-REGYPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+ + + GYPCPPYKII+LD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIVLD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
I++IC EEG++LD E L TLS IS+GDLRRAITYLQ A RL+G SG++P
Sbjct: 183 IVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIVPA 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
EVV++L AC+SGNFD ANK+V+N IAEGYPVS ML+QLF+ IV +DISDEQKARI KK
Sbjct: 243 EVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARISKK 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFS 159
G ADKCLVDGADEYLQLLD VS+ I+A NMPE F+
Sbjct: 303 LGEADKCLVDGADEYLQLLDVVSNTIQALCNMPEGFA 339
>ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-like isoform 1 [Glycine
max]
Length = 342
Score = 528 bits (1359), Expect = e-147
Identities = 265/339 (78%), Positives = 296/339 (87%), Gaps = 1/339 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P++QSSQ WVEKYRP+QVKDVAHQDEVVRVLTNTLET SCPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQ-REGYPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+ Q + GYPCPP+KII+LD
Sbjct: 63 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIVLD 122
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 123 EADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSR 182
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
IL+I EEGL LD EAL TLS IS GDLRRAITYLQ A RL+G SGV+P
Sbjct: 183 ILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPA 242
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
+VV++L ACKSGNFD ANK+V+N IAEGYP S ML+QLF+ IV +D+SDEQKARI KK
Sbjct: 243 KVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKK 302
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYD 153
G ADKCLVDGADEYLQLLD VS+ I+AF+++PE F+Y+
Sbjct: 303 LGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAYE 341
>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
gi|241922268|gb|EER95412.1| hypothetical protein
SORBIDRAFT_01g045530 [Sorghum bicolor]
Length = 339
Score = 528 bits (1359), Expect = e-147
Identities = 261/333 (78%), Positives = 290/333 (87%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P+V SQ WVEKYRPRQVKDVAHQ+EV+RVLTNTL+T PHMLFYGPPGTGKTTTALAI
Sbjct: 3 PLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
A+QL+GP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+A++ GYPCPPYKIIILDE
Sbjct: 63 AYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EVMSSRI
Sbjct: 123 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
+HICNEEGL+LD +AL TLS IS+GDLRRAITYLQ A RL+G SGVIP++
Sbjct: 183 MHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSSSDLISVSGVIPED 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
VV+SL AACKSG FD ANK+V N+IA+GYPVS +++Q DVIV A DI D+QKARICKK
Sbjct: 243 VVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIQDDQKARICKKL 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPE 168
G DKCLVDGADEYLQLLD S+ IRA NMP+
Sbjct: 303 GETDKCLVDGADEYLQLLDVASETIRALFNMPQ 335
>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
gi|241942605|gb|EES15750.1| hypothetical protein
SORBIDRAFT_08g004780 [Sorghum bicolor]
Length = 339
Score = 526 bits (1354), Expect = e-147
Identities = 259/333 (77%), Positives = 290/333 (87%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P+V SQ WVEKYRPRQVKDVAHQ+EV+RVLTNTL+T PHMLFYGPPGTGKTTTALAI
Sbjct: 3 PLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
A+QL+GP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVG+A++ GYPCPPYKIIILDE
Sbjct: 63 AYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPL SRCAKFRFKPL +EVMS+RI
Sbjct: 123 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLSEEVMSNRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
+HICNEEGL+LD +AL TLS IS+GDLRRAITYLQ A RL+G SGVIP++
Sbjct: 183 MHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSSDLISVSGVIPED 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
VV+SL AAC+SG FD ANK+V N+IA+GYPVS +++Q DVIVGA DI D+QKARICKK
Sbjct: 243 VVKSLLAACRSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVGADDIPDDQKARICKKL 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPE 168
G DKCLVDGADEYLQLLD S+ IRA NMP+
Sbjct: 303 GETDKCLVDGADEYLQLLDVASETIRALFNMPQ 335
>gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]
Length = 339
Score = 523 bits (1348), Expect = e-146
Identities = 261/333 (78%), Positives = 288/333 (86%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
P+V SSQ WVEKYRPRQVKDVAHQ+EVVRVLTNTLET PHMLFYGPPGTGKTTTALAI
Sbjct: 3 PLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTALAI 62
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREGYPCPPYKIIILDE 807
A+QL+GP+LYK RVLELNASD+RGINVVRTKIK+FAAVAVGSA++ GYPCPPYKIIILDE
Sbjct: 63 AYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDE 122
Query: 806 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSRI 627
ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL ++VMS+RI
Sbjct: 123 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSNRI 182
Query: 626 LHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQE 447
LHICNEEGL LD +AL TLS IS+GDLRRAITYLQ A RL+G SG IP++
Sbjct: 183 LHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISASDLISVSGAIPED 242
Query: 446 VVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKKF 267
+V+SL ACKSG FD ANK+V N+IA+GYPVS +LSQ DVIV A DI DE KARIC+K
Sbjct: 243 IVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICRKL 302
Query: 266 GVADKCLVDGADEYLQLLDAVSDIIRAFSNMPE 168
G ADKCLVDGADEYLQLLD S+ IRA N+P+
Sbjct: 303 GEADKCLVDGADEYLQLLDMASETIRALFNIPQ 335
>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis vinifera]
Length = 329
Score = 523 bits (1347), Expect = e-146
Identities = 269/340 (79%), Positives = 292/340 (85%), Gaps = 1/340 (0%)
Frame = -2
Query: 1166 PVVQSSQQWVEKYRPRQVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTALAI 987
PV+QSSQ WVEKYRP+QVKDVAHQDEV CPHMLFYGPPGTGKTTTALAI
Sbjct: 3 PVLQSSQPWVEKYRPKQVKDVAHQDEV------------CPHMLFYGPPGTGKTTTALAI 50
Query: 986 AHQLFGPDLYKLRVLELNASDDRGINVVRTKIKNFAAVAVGSAQREG-YPCPPYKIIILD 810
AHQLFGP+LYK RVLELNASDDRGINVVRTKIK+FAAVAVGS R+G YPCPPYKIIILD
Sbjct: 51 AHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILD 110
Query: 809 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPQEVMSSR 630
EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +E+MSSR
Sbjct: 111 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSR 170
Query: 629 ILHICNEEGLHLDQEALCTLSTISEGDLRRAITYLQGATRLYGXXXXXXXXXXXSGVIPQ 450
ILHIC EE L+LD EAL TLS+IS+GDLRRAITYLQGA RL+G SGV+PQ
Sbjct: 171 ILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQ 230
Query: 449 EVVQSLFAACKSGNFDSANKDVDNVIAEGYPVSLMLSQLFDVIVGASDISDEQKARICKK 270
VVQ+LFAACKSG+FDSANK+V+NVIAEGYPVS ML QLFDV+V A DISDEQKARICK+
Sbjct: 231 HVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKR 289
Query: 269 FGVADKCLVDGADEYLQLLDAVSDIIRAFSNMPEEFSYDT 150
ADKCLVDGADEYLQLLD S+ +RA NMPEEF +++
Sbjct: 290 LAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 329