BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00019479
         (540 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, part...   157   1e-36
ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, part...   149   4e-34
ref|XP_006301986.1| hypothetical protein CARUB_v10022467mg, part...   149   5e-34
ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, part...   147   2e-33
ref|XP_006282338.1| hypothetical protein CARUB_v10028633mg, part...   147   2e-33
ref|NP_178215.1| zinc ion binding / nucleic acid binding protein...   145   6e-33
ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, part...   144   1e-32
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...   144   1e-32
ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Caps...   143   2e-32
ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, part...   143   2e-32
ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, part...   143   3e-32
ref|XP_006304881.1| hypothetical protein CARUB_v10012644mg, part...   142   4e-32
ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, part...   142   4e-32
ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, part...   142   6e-32
ref|XP_006295613.1| hypothetical protein CARUB_v10024726mg, part...   141   1e-31
ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, part...   141   1e-31
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   140   1e-31
ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, part...   137   1e-30
ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, part...   137   2e-30
ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, part...   137   2e-30

>ref|XP_006295777.1| hypothetical protein CARUB_v10024899mg, partial [Capsella rubella]
           gi|482564485|gb|EOA28675.1| hypothetical protein
           CARUB_v10024899mg, partial [Capsella rubella]
          Length = 451

 Score =  157 bits (398), Expect = 1e-36
 Identities = 66/172 (38%), Positives = 112/172 (65%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           DD +   ++++ +P+G    P + I ++V+  ++  W N +++KVLG Q+  A+++R+++
Sbjct: 41  DDAFVKARVRVDFPNGRTGEPEITIGEEVISVMHGLWKNCMIVKVLGRQIPVAVLNRKLK 100

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           ++W   GRM +MD+   +F+ RFELE + L  LT GPW +FG+Y++V+QW P   P  D 
Sbjct: 101 ELWKPSGRMYVMDLPRHFFMVRFELEEEYLNALTGGPWRVFGNYLMVQQWSPNFDPLKDD 160

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL  + +  Y + +L  IA  +G+P+RVDL TL+  R +FAR+C
Sbjct: 161 IVTTPVWVRLMNIPVWYYHKSILMAIAEGVGTPLRVDLTTLSLERARFARVC 212


>ref|XP_006295894.1| hypothetical protein CARUB_v10025024mg, partial [Capsella rubella]
           gi|482564602|gb|EOA28792.1| hypothetical protein
           CARUB_v10025024mg, partial [Capsella rubella]
          Length = 507

 Score =  149 bits (376), Expect = 4e-34
 Identities = 67/172 (38%), Positives = 108/172 (62%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           D+ + A ++++ +P+GDD    V I  +V+ ++   W N +++KVLG  V  A + R++R
Sbjct: 59  DEEFVASRMRLEFPNGDDGEGVVTIGQEVISAMTSLWKNCMIVKVLGRNVPLAPLLRKLR 118

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           ++W  KG MT++D+   +F+ RFELE D + V+T GPW +FG  ++ + W P   P  D 
Sbjct: 119 ELWAPKGGMTVIDLPRQFFLVRFELEDDYMGVVTGGPWRLFGSLLMFQAWSPSFNPMQDE 178

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVR++ L +  Y + +L GIA A+G P+R DL TL   R +FAR+C
Sbjct: 179 IETTPVWVRISNLPVHYYHKTILMGIAEALGKPLRADLTTLQVERARFARVC 230


>ref|XP_006301986.1| hypothetical protein CARUB_v10022467mg, partial [Capsella rubella]
           gi|482570696|gb|EOA34884.1| hypothetical protein
           CARUB_v10022467mg, partial [Capsella rubella]
          Length = 421

 Score =  149 bits (375), Expect = 5e-34
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
 Frame = -3

Query: 529 PLAKDDLWKA----------GKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVL 380
           PL + D W A           ++K++YPDG +  P   I ++V  +++  W   +++KVL
Sbjct: 14  PLDRVDSWAAKEVLEPSFVSARMKVNYPDGVNGEPVFTIVEEVTEAMHGLWKQCMIVKVL 73

Query: 379 GGQVLHAIMDRRVRQMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIV 200
           G  V   ++ R++R++W  KG M + ++   +F+ RFE+E + L  LT GPW  FG Y++
Sbjct: 74  GRNVPILVLSRKLRELWKPKGAMYVTNLPRQFFMVRFEVEEEYLTALTGGPWKAFGSYLM 133

Query: 199 VRQWDPLVKPESDVLRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARG 20
           VR W P  +P  D + T   WVR + L + LY + +L G+A A+G P+RVD NTL   R 
Sbjct: 134 VRAWSPHFEPSRDDITTIPVWVRFSNLPVALYHQTILLGLAQALGKPLRVDANTLNFERP 193

Query: 19  KFARIC 2
           +FAR+C
Sbjct: 194 RFARVC 199


>ref|XP_006292963.1| hypothetical protein CARUB_v10019240mg, partial [Capsella rubella]
           gi|482561670|gb|EOA25861.1| hypothetical protein
           CARUB_v10019240mg, partial [Capsella rubella]
          Length = 405

 Score =  147 bits (370), Expect = 2e-33
 Identities = 64/172 (37%), Positives = 105/172 (61%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           D+  KA ++ +++PDG++  P V I  +V+  +   W   +++KVLG  +  A M R++R
Sbjct: 10  DEFVKA-RMDLAFPDGEEGEPFVTIGSEVLTVMRGLWKRCMIVKVLGRNIPIAAMSRKLR 68

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           ++W  KG M + D+   +F+ RF++E + +  LT GPW +FG Y++V+ W P   P  D 
Sbjct: 69  ELWKPKGAMHVTDLPRQFFMVRFDMEEEYMEALTGGPWKVFGSYLMVQDWSPDFDPMRDE 128

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL+ + M+ Y   +L GIA  +G P++VDL T    R +FAR+C
Sbjct: 129 ITTTPVWVRLSNIPMLFYHRQILMGIAEGLGKPLKVDLTTQNLDRARFARVC 180


>ref|XP_006282338.1| hypothetical protein CARUB_v10028633mg, partial [Capsella rubella]
           gi|482551042|gb|EOA15236.1| hypothetical protein
           CARUB_v10028633mg, partial [Capsella rubella]
          Length = 463

 Score =  147 bits (370), Expect = 2e-33
 Identities = 64/167 (38%), Positives = 105/167 (62%)
 Frame = -3

Query: 502 AGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNL 323
           + ++K+ YP+G +  P   IA++V+ +++  W   +V+KVLG  V   ++ R+++++W  
Sbjct: 44  SARMKVDYPNGINGEPVFTIAEEVIEAMHGLWKQCMVVKVLGRNVPIPVLTRKLKELWKP 103

Query: 322 KGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTY 143
           +G M + D+   +F+ RFE+E + L  LT GPW  FG Y++VR W P  +P  D + TT 
Sbjct: 104 QGAMYVTDLPRQFFMVRFEVEDEYLTALTGGPWKAFGSYLMVRAWSPEFEPSRDDIVTTP 163

Query: 142 AWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
            WVR + L + LY + +L G+A A+G P+RVD NTL   R +F R+C
Sbjct: 164 VWVRFSNLPVALYHQTILLGLAQALGKPLRVDTNTLNFERARFPRVC 210


>ref|NP_178215.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
           thaliana] gi|6598620|gb|AAF18653.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250297|gb|AEC05391.1| zinc
           ion binding / nucleic acid binding protein [Arabidopsis
           thaliana]
          Length = 515

 Score =  145 bits (366), Expect = 6e-33
 Identities = 61/172 (35%), Positives = 108/172 (62%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           DD +   ++ + +PDG+D  P + I ++V+ ++   W   +++KVLG Q+  ++++R++R
Sbjct: 41  DDEFVRERVGLEFPDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLR 100

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           ++W   G MT+MD+   +F+ RFELE + +  LT GPW + G+Y++V+ W     P  D 
Sbjct: 101 ELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDD 160

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL+ +    Y   +L  IA  +G P++VD+NT+   +G+FAR+C
Sbjct: 161 IVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVC 212


>ref|XP_006296651.1| hypothetical protein CARUB_v10015577mg, partial [Capsella rubella]
           gi|482565360|gb|EOA29549.1| hypothetical protein
           CARUB_v10015577mg, partial [Capsella rubella]
          Length = 476

 Score =  144 bits (364), Expect = 1e-32
 Identities = 62/165 (37%), Positives = 102/165 (61%)
 Frame = -3

Query: 496 KIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKG 317
           ++++ +PDG+D  P + I  +VM  +   W   +++KVLG  V  + + R++R++W   G
Sbjct: 48  RLQVEFPDGEDGEPVITIGSEVMDVMKGLWKQCIIVKVLGRNVAISALSRKLRELWKPNG 107

Query: 316 RMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAW 137
            M ++D+    F+ RF+ E +    LT GPW +FG Y++V+ W P   P  D + TT  W
Sbjct: 108 GMYVLDLPRQCFMIRFDREDEYHAALTGGPWKVFGSYLLVQDWSPDFNPLRDDIVTTPVW 167

Query: 136 VRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           VRL+ + ++ Y+E +L GIA+ +G PV+VDL TL   R +FAR+C
Sbjct: 168 VRLSNIPVIFYQEDILLGIASGLGKPVKVDLTTLHIERARFARVC 212


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score =  144 bits (364), Expect = 1e-32
 Identities = 61/172 (35%), Positives = 103/172 (59%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           DD +   ++++ +PDG D  P + I  +V+ ++   +   +++K+LG      ++ R++R
Sbjct: 56  DDDFVRSRMRLEFPDGVDGEPVITIEKEVLDAMNGLYKQCMLVKILGRHTTIEVLSRKLR 115

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
            +W   G M+++D+   +F+ RFE+E D +  LT GPW + G  ++V+ W P   P  DV
Sbjct: 116 DLWRPTGGMSVLDLPRQFFMVRFEVEEDYMMALTGGPWRVLGSILMVQAWSPEFNPLRDV 175

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVR+  L +  Y   +L GIAA +G P++VDL TL   RG+FAR+C
Sbjct: 176 IETTPVWVRVANLPVTFYHNEILLGIAAGLGKPIKVDLTTLRKERGRFARVC 227


>ref|XP_006296775.1| hypothetical protein CARUB_v10015820mg [Capsella rubella]
           gi|482565484|gb|EOA29673.1| hypothetical protein
           CARUB_v10015820mg [Capsella rubella]
          Length = 503

 Score =  143 bits (361), Expect = 2e-32
 Identities = 61/165 (36%), Positives = 102/165 (61%)
 Frame = -3

Query: 496 KIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKG 317
           ++++ +PDG+D  P + I  +V+  +   W   +++KVLG  V  + + R++R++W   G
Sbjct: 48  RLQVEFPDGEDGEPVITIGSEVLDVMKGLWKQCIIVKVLGRNVAISALSRKLRELWKPNG 107

Query: 316 RMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAW 137
            M ++D+    F+ RF+ E +    LT GPW +FG Y++V+ W P   P  D + TT  W
Sbjct: 108 GMYVLDLPRQCFMIRFDREDEYHAALTGGPWKVFGSYLLVQDWSPDFNPLRDDIVTTPVW 167

Query: 136 VRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           VRL+ + ++ Y+E +L GIA+ +G PV+VDL TL   R +FAR+C
Sbjct: 168 VRLSNIPVIFYQEDILLGIASGLGKPVKVDLTTLHIERARFARVC 212


>ref|XP_006293025.1| hypothetical protein CARUB_v10019305mg, partial [Capsella rubella]
           gi|482561732|gb|EOA25923.1| hypothetical protein
           CARUB_v10019305mg, partial [Capsella rubella]
          Length = 361

 Score =  143 bits (361), Expect = 2e-32
 Identities = 64/164 (39%), Positives = 103/164 (62%)
 Frame = -3

Query: 493 IKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKGR 314
           ++M  P+GD+    V I  +V+  +   W   +++KVLG  V  A++ +++R+MW  KG 
Sbjct: 49  VRMELPEGDEGEAVVTIDAEVLEVMNGLWKQCMIVKVLGRHVSIAVLLKKLREMWRPKGA 108

Query: 313 MTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAWV 134
           M ++D+   +F+ RFELE + L  LT GPW IFG Y++V+ W+P   P +D + TT  W+
Sbjct: 109 MYVVDLPRQFFMVRFELEDEYLEALTGGPWRIFGSYLMVKAWEPEFDPMTDEIVTTPVWI 168

Query: 133 RLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           RL+ + +  Y + +L  +A  +G PV+VDL T+   RG+FARIC
Sbjct: 169 RLSNIPVNFYHKRLLMRLARGLGKPVKVDLTTMNFERGRFARIC 212


>ref|XP_006285607.1| hypothetical protein CARUB_v10007057mg, partial [Capsella rubella]
           gi|482554312|gb|EOA18505.1| hypothetical protein
           CARUB_v10007057mg, partial [Capsella rubella]
          Length = 394

 Score =  143 bits (360), Expect = 3e-32
 Identities = 61/172 (35%), Positives = 102/172 (59%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           D  +   ++++ +P+G+D  P + I  +++ +++  W N +V+KVLG  +  A++ RR+R
Sbjct: 41  DAAFVKSRVRLEFPNGEDGEPFITIGAEIIEAMHGLWKNCMVVKVLGRNITIAVLSRRLR 100

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
            MWN    M ++D+   +F+ RFE E + +  LT GPW IFG Y++ + W P   P  D 
Sbjct: 101 DMWNPSRDMFVLDLPRQFFMVRFESEEEYMAALTGGPWKIFGSYLMAQAWSPDFDPIRDE 160

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL+ + +  Y   +L  IA  +G P++VDL T    R +FAR+C
Sbjct: 161 ITTTPVWVRLSNIPVTFYHTSILEEIARGLGKPLKVDLTTTKLERARFARVC 212


>ref|XP_006304881.1| hypothetical protein CARUB_v10012644mg, partial [Capsella rubella]
           gi|482573592|gb|EOA37779.1| hypothetical protein
           CARUB_v10012644mg, partial [Capsella rubella]
          Length = 478

 Score =  142 bits (359), Expect = 4e-32
 Identities = 65/167 (38%), Positives = 103/167 (61%)
 Frame = -3

Query: 502 AGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNL 323
           A K ++ +P+G++    V I D+V+  +   W   +++KVL   V   ++ +R+R+MW  
Sbjct: 46  AEKCRLEFPEGEEGEAVVTIGDEVLRVMNTLWQRCIIVKVLSRTVTLPVLSKRLREMWMP 105

Query: 322 KGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTY 143
           KG M ++D+   +F+ RFELE + L  LT GPW +FG  ++V+ W P   P  D + TT 
Sbjct: 106 KGAMYVIDLPRRFFMIRFELEEEYLAALTGGPWRVFGSILMVQAWTPEFDPLVDEIVTTP 165

Query: 142 AWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
            W+RLT + + LY + +LF IA  +G+P++VDL TL   R +FARIC
Sbjct: 166 FWIRLTNIPVNLYHKDILFLIARGLGNPLKVDLTTLNFERARFARIC 212


>ref|XP_006279197.1| hypothetical protein CARUB_v10016517mg, partial [Capsella rubella]
           gi|482547819|gb|EOA12095.1| hypothetical protein
           CARUB_v10016517mg, partial [Capsella rubella]
          Length = 457

 Score =  142 bits (359), Expect = 4e-32
 Identities = 58/172 (33%), Positives = 106/172 (61%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           D  + + ++++ +PDG+D  P + I  +V+  +   W   +++KVLG  ++ + + R+++
Sbjct: 37  DKAFVSERLRLDFPDGEDGEPFITIGSEVLDVMKGLWKQCIIVKVLGRSIVLSALSRKLK 96

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           ++W   G M+++D+   +F+ RFE E + L  LT GPW +FG +++V+ W     P  D 
Sbjct: 97  ELWKPTGEMSVVDLPRQFFMIRFEREEEYLAALTGGPWRVFGSHLMVQAWSSDFNPLRDD 156

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL+ L +  Y + +L GIA+ +G P++VD+ TL   R +FAR+C
Sbjct: 157 IVTTPVWVRLSNLPVFFYHQDILLGIASGLGKPIKVDVTTLNFERARFARVC 208


>ref|XP_006296777.1| hypothetical protein CARUB_v10015822mg, partial [Capsella rubella]
           gi|482565486|gb|EOA29675.1| hypothetical protein
           CARUB_v10015822mg, partial [Capsella rubella]
          Length = 333

 Score =  142 bits (357), Expect = 6e-32
 Identities = 61/171 (35%), Positives = 105/171 (61%)
 Frame = -3

Query: 514 DLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQ 335
           D +   ++++ +PDG    P + +  +V+  +   W N +++KVL   V  A + +R+R+
Sbjct: 39  DEFVTARMRLEFPDGKHGEPVITVGQEVVSVMRSLWKNCMLVKVLDRHVPIAALSKRLRE 98

Query: 334 MWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVL 155
           +W   G M+++D+   +F+ RF+ E+D + V+T GPW +FG  ++V+ W P   P+ D +
Sbjct: 99  LWKPTGGMSVLDLPRQFFMVRFDNEADYMAVMTGGPWRLFGSVLMVQAWSPSFDPQHDEI 158

Query: 154 RTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           RTT  WVR++ L ++ Y + +L GIA  +G P+RVDL T    R +FARIC
Sbjct: 159 RTTPVWVRVSKLPVLFYHKAILMGIAEGLGKPLRVDLTTFRFERARFARIC 209


>ref|XP_006295613.1| hypothetical protein CARUB_v10024726mg, partial [Capsella rubella]
           gi|482564321|gb|EOA28511.1| hypothetical protein
           CARUB_v10024726mg, partial [Capsella rubella]
          Length = 489

 Score =  141 bits (355), Expect = 1e-31
 Identities = 62/163 (38%), Positives = 101/163 (61%)
 Frame = -3

Query: 490 KMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKGRM 311
           K+++PDG +  P + +  +VM ++   W   +++KVLG  +  A+M R++++MW  +G M
Sbjct: 47  KLTFPDGVNGEPVITVGREVMEAMNGLWKKCMIVKVLGRSMSIAVMSRKLKEMWRPQGAM 106

Query: 310 TLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAWVR 131
            + D+   +FV RFELE + +  LT GPW +FG Y++V+ W P   P  + + TT  W+R
Sbjct: 107 VVTDLPRQFFVVRFELEEEYMAALTGGPWKMFGSYLMVQAWSPDFDPLRNDIVTTPVWIR 166

Query: 130 LTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           L+ + M LY   +L  IA  +G P+RVD+ TL   R +FAR+C
Sbjct: 167 LSNIPMNLYHSSILMIIAEGLGKPLRVDMQTLKFDRARFARVC 209


>ref|XP_006282222.1| hypothetical protein CARUB_v10028495mg, partial [Capsella rubella]
           gi|482550926|gb|EOA15120.1| hypothetical protein
           CARUB_v10028495mg, partial [Capsella rubella]
          Length = 409

 Score =  141 bits (355), Expect = 1e-31
 Identities = 61/172 (35%), Positives = 105/172 (61%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           +D +   ++++ +P+G    P + I  +V+  +Y  + N +++KVLG  +    ++R+++
Sbjct: 56  EDEFAKTRMRVEFPNGAKGEPVITIGKEVLEVMYGLYRNCMIVKVLGRHITIDALNRKLK 115

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           +MW  +G M ++D+   +F+ RF+LE D +  +T GPW +FG  ++V+ W P   P  D 
Sbjct: 116 EMWKPRGGMAVLDLPRQFFMIRFDLEEDYMAAVTGGPWRVFGSILMVKAWSPDFDPVRDD 175

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVR++ L +  Y   +L GIA  +G P+RVDL TL   RG+FARIC
Sbjct: 176 IVTTPVWVRISNLPVFYYHRKILMGIAEGVGKPLRVDLTTLKMERGRFARIC 227


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/172 (37%), Positives = 104/172 (60%)
 Frame = -3

Query: 517 DDLWKAGKIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVR 338
           DD + + ++++ +P+G D    + I  +V+  +   W   +V+KVLG  +  A ++RR+R
Sbjct: 16  DDEFVSSRMRVEFPNGADGESVITIGREVLDVMNSMWKQCMVVKVLGRNISIANLNRRLR 75

Query: 337 QMWNLKGRMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDV 158
           +MW  +G M ++D+   +F+ RFE E + L  LT GPW  FG Y++V+ W P   P  D 
Sbjct: 76  EMWKPQGAMFVVDLPCQFFMIRFEREDEYLSALTGGPWRAFGSYLLVQAWSPEFDPLRDE 135

Query: 157 LRTTYAWVRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + TT  WVRL  + + LY   +L GIA ++G PV+VD+ TL   R +FAR+C
Sbjct: 136 ITTTPIWVRLMNIPLSLYHTSILMGIAGSLGKPVKVDMTTLHVERARFARMC 187


>ref|XP_006294233.1| hypothetical protein CARUB_v10023230mg, partial [Capsella rubella]
           gi|482562941|gb|EOA27131.1| hypothetical protein
           CARUB_v10023230mg, partial [Capsella rubella]
          Length = 440

 Score =  137 bits (346), Expect = 1e-30
 Identities = 61/165 (36%), Positives = 102/165 (61%)
 Frame = -3

Query: 496 KIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKG 317
           ++K+ +PDG    P V +  +++ ++   W N +V+KVLG  +  +++ +R+R+MW  +G
Sbjct: 48  RVKVVFPDGVHGEPVVTVGKELLEAMNGLWKNCMVVKVLGRNMSISVLSKRLREMWKPRG 107

Query: 316 RMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAW 137
            M ++D+   +F+ RFEL  + L VLT GPW  FG Y++V+ W P   P  + + TT  W
Sbjct: 108 VMHVVDLPRQFFMIRFELVEEYLAVLTGGPWRAFGSYLMVQAWSPEFDPMRNEIVTTPVW 167

Query: 136 VRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           VRL+ + + +Y   +L  IA  +G P++VD+ TL   R +FARIC
Sbjct: 168 VRLSNIPVNMYHRSILMEIATGLGKPIKVDMATLNFDRARFARIC 212


>ref|XP_006286068.1| hypothetical protein CARUB_v10007601mg, partial [Capsella rubella]
           gi|482554773|gb|EOA18966.1| hypothetical protein
           CARUB_v10007601mg, partial [Capsella rubella]
          Length = 459

 Score =  137 bits (345), Expect = 2e-30
 Identities = 60/162 (37%), Positives = 100/162 (61%)
 Frame = -3

Query: 487 MSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKGRMT 308
           +++PDG +  P + +  +VM ++   W   +++KVLG  +  A+M R++++MW  +G M 
Sbjct: 48  LTFPDGVNGEPVITVGREVMEAMNGLWKKCMIVKVLGRSMSIAVMSRKLKEMWRPQGAMV 107

Query: 307 LMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAWVRL 128
           + D+ + +FV RFELE + +  LT GPW +FG Y++V+ W P   P  + + TT  W+RL
Sbjct: 108 VTDLPHQFFVVRFELEEEYMAALTGGPWKMFGSYLMVQAWSPDFDPLRNDIVTTPVWIRL 167

Query: 127 TGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           + + M LY   +L  IA  +G P+R D+ TL   R +FAR+C
Sbjct: 168 SNIPMNLYHSSILMIIAEGLGKPLREDMQTLKFDRARFARVC 209


>ref|XP_006286839.1| hypothetical protein CARUB_v10003838mg, partial [Capsella rubella]
           gi|482555545|gb|EOA19737.1| hypothetical protein
           CARUB_v10003838mg, partial [Capsella rubella]
          Length = 391

 Score =  137 bits (344), Expect = 2e-30
 Identities = 57/165 (34%), Positives = 100/165 (60%)
 Frame = -3

Query: 496 KIKMSYPDGDDSSPHVAIADDVMYSLYVAWSNSVVIKVLGGQVLHAIMDRRVRQMWNLKG 317
           ++++ +P+G +  P + I  +V+ +++  W   +++KVLG  V  A++ RR++++W    
Sbjct: 48  RLRLEFPNGKNGEPVITIGAEVIEAMHGLWKRCMIVKVLGRNVPVAVLSRRLKELWRPSR 107

Query: 316 RMTLMDILNGYFVARFELESDILYVLTEGPWMIFGHYIVVRQWDPLVKPESDVLRTTYAW 137
            M ++D+   +F+ RFE + + L  LT GPW +FG Y++V+ W P   P  D L  T  W
Sbjct: 108 DMVVVDLPRQFFMVRFESDDEYLAALTGGPWKVFGSYLMVQAWSPDFDPVRDELEMTPVW 167

Query: 136 VRLTGLSMVLYEEHVLFGIAAAIGSPVRVDLNTLTAARGKFARIC 2
           VRL+ + +  Y   +L GIA  +G P++VDL T   +R +FAR+C
Sbjct: 168 VRLSNIPVSFYHTTILMGIAEGLGKPIKVDLTTTNFSRARFARVC 212