BLASTX nr result
ID: Rheum21_contig00019464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019464
(1132 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao] 75 6e-11
gb|EMJ15309.1| hypothetical protein PRUPE_ppa017108mg, partial [... 73 2e-10
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 72 3e-10
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 72 3e-10
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 72 4e-10
gb|EMJ12120.1| hypothetical protein PRUPE_ppb019242mg, partial [... 71 7e-10
ref|XP_004292270.1| PREDICTED: putative ribonuclease H protein A... 71 9e-10
ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein A... 70 1e-09
ref|XP_006475107.1| PREDICTED: putative ribonuclease H protein A... 68 6e-09
ref|XP_006490009.1| PREDICTED: putative ribonuclease H protein A... 67 1e-08
dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like ... 67 1e-08
ref|XP_002309989.1| predicted protein [Populus trichocarpa] 67 2e-08
ref|XP_002324246.1| predicted protein [Populus trichocarpa] 66 2e-08
ref|XP_004306073.1| PREDICTED: putative ribonuclease H protein A... 65 4e-08
ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein A... 65 4e-08
ref|XP_002467546.1| hypothetical protein SORBIDRAFT_01g030030 [S... 65 4e-08
gb|ABK28199.1| unknown [Arabidopsis thaliana] 65 5e-08
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali... 65 5e-08
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali... 65 5e-08
gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana] 64 9e-08
>gb|EOX98014.1| Ribonuclease H protein [Theobroma cacao]
Length = 528
Score = 74.7 bits (182), Expect = 6e-11
Identities = 44/139 (31%), Positives = 70/139 (50%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG++ + AGG+ RN G + GF K +A+ AEL G+L G+ +A
Sbjct: 260 NTDGAYKRSIEEASAGGVKRNAEGDWQAGFVAKLGKCSAYRAELWGILHGLRLAWDSGFK 319
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
++Q++VD+ V++ + P + D I IK +L W +S + R GN AD LA
Sbjct: 320 KVQVQVDNKMVVQAISTDKLIPGANTDLISAIKNVL-QKEWEVSFMHTYREGNMVADYLA 378
Query: 1020 KFSFLCTSGNNVLMRPPEG 1076
++F+ VL + P G
Sbjct: 379 SYAFVLEESYVVLEQAPTG 397
>gb|EMJ15309.1| hypothetical protein PRUPE_ppa017108mg, partial [Prunus persica]
Length = 197
Score = 73.2 bits (178), Expect = 2e-10
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DGS+ GS C+ GG+IRN G +L GFA AEL L +G+E+A + +
Sbjct: 27 NVDGSYRSGSGCIAGGGVIRNQEGEWLSGFAANLGTGKVIEAELWALYRGLELAWKSGLA 86
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDY-ILKIKTLLADPSWSISIKYIPRLGNKAAD*L 1016
+++E DS VL+ H + ++K L + SWS S+ + N AD L
Sbjct: 87 PIEVETDSTTVLKLMHNPVEVNWKHPQFNLIKSCQNLLNQSWSCSLNHAYWQQNSVADCL 146
Query: 1017 AKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
A F G + PP P + D
Sbjct: 147 ANFGLTMELGCHYFDVPPPLCEPFLVQD 174
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 72.4 bits (176), Expect = 3e-10
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ S AGGL+RN +G ++ G+ +F AEL GL +G+ +AK
Sbjct: 1743 NSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFT 1802
Query: 840 RLQIEVDS---VEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD 1010
+L E DS V+VL + VT S+ ++K LL D I + +I R GN+ AD
Sbjct: 1803 KLIAETDSEAVVQVLRKDGPVTPDASI----LVKDCKLLLDHFQEIKVTHILREGNQCAD 1858
Query: 1011 *LAKFSFLCTSGNNVLMRPPEGLVPIMEDDKI 1106
LA + G +L RPP+ L ++ D I
Sbjct: 1859 FLANLGQSSSWGTTILERPPDDLRIFLQRDAI 1890
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 72.4 bits (176), Expect = 3e-10
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ S AGGL+RN +G ++ G+ +F AEL GL +G+ +AK
Sbjct: 1211 NSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFT 1270
Query: 840 RLQIEVDS---VEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD 1010
+L E DS V+VL + VT S+ ++K LL D I + +I R GN+ AD
Sbjct: 1271 KLIAETDSEAVVQVLRKDGPVTPDASI----LVKDCKLLLDHFQEIKVTHILREGNQCAD 1326
Query: 1011 *LAKFSFLCTSGNNVLMRPPEGLVPIMEDDKI 1106
LA + G +L RPP+ L ++ D I
Sbjct: 1327 FLANLGQSSSWGTTILERPPDDLRIFLQRDAI 1358
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 72.0 bits (175), Expect = 4e-10
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ S AGGL+RN +G ++ G+ +F AEL GL +G+ +AK
Sbjct: 1211 NSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFT 1270
Query: 840 RLQIEVDS---VEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD 1010
+L E DS V+VL + VT S+ ++K LL D I + +I R GN+ AD
Sbjct: 1271 KLIAETDSEAVVQVLRKDGPVTPDASI----LVKDCKLLLDHFQEIKVTHILREGNQCAD 1326
Query: 1011 *LAKFSFLCTSGNNVLMRPPEGLVPIMEDDKI 1106
LA + G +L RPP+ L ++ D I
Sbjct: 1327 FLANLGQSSSWGTTILERPPDDLRIFLQRDAI 1358
>gb|EMJ12120.1| hypothetical protein PRUPE_ppb019242mg, partial [Prunus persica]
Length = 174
Score = 71.2 bits (173), Expect = 7e-10
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +3
Query: 696 VGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIVRLQIEVDSVEVL 875
+ AGGLIRN G ++ GF+ AEL L G+E+A++M++ +L +E DS VL
Sbjct: 33 IAAGGLIRNSAGDWIAGFSANLGYGDILKAELSALCHGLELAQRMQVTKLIVETDSKPVL 92
Query: 876 EQATAVTFTPSLHRDYILKIK-TLLADPSWSISIKYIPRLGNKAAD*LAKFSFLCTSGNN 1052
A H IL+ K SW I + R N AAD LAK G +
Sbjct: 93 RLLNA--NLEDHHPLLILRNKCRSYWKSSWDCKINHEYRQVNSAADSLAKMGHRMEMGTH 150
Query: 1053 VLMRPPEGLVPIMEDDK 1103
+PP+G++ ++EDD+
Sbjct: 151 FFDKPPDGIIGVLEDDR 167
>ref|XP_004292270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 224
Score = 70.9 bits (172), Expect = 9e-10
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DGS + + A G++RN G +L GF+ K AEL GLLKGMEMA Q
Sbjct: 67 NVDGSLHKNTGIICARGVLRNDRGEWLNGFSAKLGIGQVLEAELWGLLKGMEMAWQHGCN 126
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLA-DPSWSISIKYIPRLGNKAAD*L 1016
L++EVDS+ ++ +V LH Y L + +W++S+ + R N AD L
Sbjct: 127 SLEVEVDSLVAVKLVLSV--IDHLHPLYSLITNCQESLSRNWNVSLIHDYRESNSVADLL 184
Query: 1017 AKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
A G PP ++P++E D
Sbjct: 185 ASIGHGYELGCRFFSSPPNDVIPLLEAD 212
>ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 569
Score = 70.5 bits (171), Expect = 1e-09
Identities = 50/147 (34%), Positives = 74/147 (50%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ G A GLIR+H G +L GF + + AEL GL +G+++A I
Sbjct: 348 NTDGAHNRGGTST-AWGLIRDHMGRWLSGFGMMIGSCSITVAELWGLYQGLQLAWNSGIR 406
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
+LQ+E+DS+ VL+ T + + + I IK L W +SI +I R N AAD +A
Sbjct: 407 KLQVEIDSLCVLQLVTKPSLEINHYAPLIQAIKDYL-KMDWQVSISHIYREANFAADYMA 465
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
+F G + PP G+ + D
Sbjct: 466 NLAFSIPLGLAIYHTPPLGVKSFLFKD 492
>ref|XP_006475107.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 246
Score = 68.2 bits (165), Expect = 6e-09
Identities = 49/147 (33%), Positives = 74/147 (50%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ M SD GAGGLIR++ G + G+ + AEL GL G+ +A
Sbjct: 90 NTDGA-MKPSDHAGAGGLIRDYRGVWQIGYCANLGFCSVTSAELWGLFHGLSIAWLYGYR 148
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
R+ +EVDS +L+ ++ T + H I I+ L+ W I + +I R N AAD LA
Sbjct: 149 RVIVEVDSKCILQLVSSSNPTINEHLSLIKAIQELIG-RKWLIQMNHIYREANAAADFLA 207
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
+S G + PP ++ I+ +D
Sbjct: 208 TYSLSFPVGLHYFQSPPLNMLNILNND 234
>ref|XP_006490009.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 171
Score = 67.4 bits (163), Expect = 1e-08
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ M GAGGL+R+++G +L GF V + AEL GLL G+++A
Sbjct: 15 NTDGA-MKRFGYAGAGGLLRDYNGNWLMGFTVNLGMCSVLSAELWGLLHGLKVAWDYGFR 73
Query: 840 RLQIEVDS---VEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD 1010
LQ+ VD+ V +LE+A P+ ++K L W + ++++ R N AAD
Sbjct: 74 HLQVGVDNKNVVLLLERA----HPPANENAILVKTIRELLARDWIVHMEHVYRKANSAAD 129
Query: 1011 *LAKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
LA +S G +VL PP ++ ++ +D
Sbjct: 130 FLASYSLTKPLGLHVLPSPPPDIIGLLCND 159
>dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08
Identities = 43/154 (27%), Positives = 78/154 (50%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ AGG++R+ GA+ GF++ +A HAEL G+ G+ A + K+
Sbjct: 151 NTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVP 210
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
R+++EVDS E + + S +++++ W + I Y+ R N AD LA
Sbjct: 211 RVELEVDS-EAIVGFLKTGISDSHPLSFLVRLCHNFLQKDWLVRIVYVYREANCLADGLA 269
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDDKILSEQL 1121
++ L + G + P+ + ++++D + S QL
Sbjct: 270 NYTILLSLGFHSFDFVPDAMSSLLKEDTLGSTQL 303
>ref|XP_002309989.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 66.6 bits (161), Expect = 2e-08
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG GAGG+IR+H GA++ GFA ++ +AEL + G+++A
Sbjct: 87 NVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFR 146
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
++ +E DS V+ + + + I++IK +L W ++ ++ R N AD LA
Sbjct: 147 KVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLG-RDWEVTTYHVYREANCVADWLA 205
Query: 1020 KFSF---LCTSGNNVLMRPPEGLVPIMEDDKI 1106
+ L G++VL PP GL P++ D I
Sbjct: 206 NYGLTRDLLDRGSDVLEEPPSGLYPLLYYDLI 237
>ref|XP_002324246.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 66.2 bits (160), Expect = 2e-08
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG GAGG+IR H GA++ GFA ++ +AEL + G+++A
Sbjct: 87 NVDGCSKGNPGVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRGFR 146
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
++ +E DS V+ + + + I++IK +L W ++ ++ R N AD LA
Sbjct: 147 KVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLG-RDWEVTTYHVYREANCVADWLA 205
Query: 1020 KFSF---LCTSGNNVLMRPPEGLVPIMEDDKI 1106
+ L G++VL PP GL P+ D I
Sbjct: 206 NYGLSRDLLDRGSDVLEEPPSGLYPLFYYDLI 237
>ref|XP_004306073.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 187
Score = 65.5 bits (158), Expect = 4e-08
Identities = 45/154 (29%), Positives = 72/154 (46%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ + S +GAGG+IRNH GA++ GF + AE L G+++A ++ I
Sbjct: 10 NIDGTRISSSSMIGAGGVIRNHAGAWIAGFQINLGVCAILDAEAWALFHGLKLASKLHIS 69
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
L+IE DS +++ + + +++ + + + +I R N AD LA
Sbjct: 70 CLEIESDSAILVQLMNCSNLSSHPLGSLLGGCSSMMTEMD-DVKLFHIFREANMTADSLA 128
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDDKILSEQL 1121
K S G + PP +P DD EQL
Sbjct: 129 KCSISNELGLIIFEDPPVHAIPAYLDDLAALEQL 162
>ref|XP_004292485.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 207
Score = 65.5 bits (158), Expect = 4e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ + S +GAGG+IRNH A++ GF + G A AE GL G+++A + I
Sbjct: 47 NIDGTRVSSSGMIGAGGVIRNHSDAWITGFQI-NLGVGAIDAEAWGLFHGLKLASNLHIS 105
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
+L+IE DS ++ + + + K++++ + + ++ R N AD LA
Sbjct: 106 KLEIESDSAILVHLMKSANLSLHPLGSLLNGCKSMMSQMD-DVKLSHVFRESNMTADVLA 164
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDDKI 1106
K S G + PP + + DD +
Sbjct: 165 KCSISNDLGLILFEEPPAHAILVFLDDLV 193
>ref|XP_002467546.1| hypothetical protein SORBIDRAFT_01g030030 [Sorghum bicolor]
gi|241921400|gb|EER94544.1| hypothetical protein
SORBIDRAFT_01g030030 [Sorghum bicolor]
Length = 299
Score = 65.5 bits (158), Expect = 4e-08
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLR-GFAVKEHGTTAFHAELLGLLKGMEMAKQMKI 836
NCDG+F + G G LIR G + G+ E+ A H EL+ L+ ++ A + I
Sbjct: 166 NCDGAFFSNTRSEGWGFLIREWDGGVISSGYGRLENVNEAVHTELVACLQALQRAADLGI 225
Query: 837 VRLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*L 1016
R+ E D+ +++ A +V + + + K LL S+ YIPRL NKAAD L
Sbjct: 226 QRIIFETDAYMIVQAARSVDYDRCSAGGLLWEFKDLLRSNFLMYSVNYIPRLCNKAADGL 285
Query: 1017 AKFSFLCTSG 1046
A + G
Sbjct: 286 AALGASLSQG 295
>gb|ABK28199.1| unknown [Arabidopsis thaliana]
Length = 315
Score = 65.1 bits (157), Expect = 5e-08
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ AGG++R+ GA+ GFA+ +A AEL G+ G+ +A + ++
Sbjct: 157 NTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVT 216
Query: 840 RLQIEVDSVEV-------LEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGN 998
RL+IEVDS V + + ++F L D+I + W + I ++ R N
Sbjct: 217 RLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISR--------DWRVRISHVYREAN 268
Query: 999 KAAD*LAKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
+ AD LA ++F G + L P+ L I+ DD
Sbjct: 269 RLADGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 65.1 bits (157), Expect = 5e-08
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ AGG++R+ GA+ GFA+ +A AEL G+ G+ +A + ++
Sbjct: 157 NTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVT 216
Query: 840 RLQIEVDSVEV-------LEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGN 998
RL+IEVDS V + + ++F L D+I + W + I ++ R N
Sbjct: 217 RLEIEVDSEIVVGFLKIXINEVHPLSFLVRLCHDFISR--------DWRVRISHVYREAN 268
Query: 999 KAAD*LAKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
+ AD LA ++F G + L P+ L I+ DD
Sbjct: 269 RLADGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 314
Score = 65.1 bits (157), Expect = 5e-08
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ AGG++R+ GA+ GFA+ +A AEL G+ G+ +A + ++
Sbjct: 157 NTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVT 216
Query: 840 RLQIEVDSVEV-------LEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGN 998
RL+IEVDS V + + ++F L D+I + W + I ++ R N
Sbjct: 217 RLEIEVDSEIVVGFLKIGINEVHPLSFLVRLCHDFISR--------DWRVRISHVYREAN 268
Query: 999 KAAD*LAKFSFLCTSGNNVLMRPPEGLVPIMEDD 1100
+ AD LA ++F G + L P+ L I+ DD
Sbjct: 269 RLADGLANYAFSLPLGFHSLSLVPDSLRFILLDD 302
>gb|AAF19536.1|AC007190_4 F23N19.5 [Arabidopsis thaliana]
Length = 233
Score = 64.3 bits (155), Expect = 9e-08
Identities = 45/149 (30%), Positives = 71/149 (47%)
Frame = +3
Query: 660 NCDGSFMLGSDCVGAGGLIRNHHGAFLRGFAVKEHGTTAFHAELLGLLKGMEMAKQMKIV 839
N DG+ AGG +RN +G + GFA+ A AEL G+ G+ MA I
Sbjct: 76 NTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLAPLAELWGVYYGLFMAWDRGIT 135
Query: 840 RLQIEVDSVEVLEQATAVTFTPSLHRDYILKIKTLLADPSWSISIKYIPRLGNKAAD*LA 1019
RL++EVDS E++ S +++++ W + I ++ R N+ AD LA
Sbjct: 136 RLELEVDS-EMVVGFLRTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHVYREANRLADGLA 194
Query: 1020 KFSFLCTSGNNVLMRPPEGLVPIMEDDKI 1106
++F G + PP L I+ DD++
Sbjct: 195 NYAFDLPLGYHAFASPPNSLDSILRDDEL 223