BLASTX nr result
ID: Rheum21_contig00019324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019324
(853 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containi... 92 3e-16
ref|XP_004250511.1| PREDICTED: pentatricopeptide repeat-containi... 91 4e-16
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] 89 3e-15
gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protei... 85 4e-14
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ... 70 7e-10
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar... 68 4e-09
gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis] 66 1e-08
ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutr... 66 2e-08
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutr... 65 4e-08
ref|XP_006826681.1| hypothetical protein AMTR_s00137p00065490 [A... 64 7e-08
tpg|DAA52931.1| TPA: hypothetical protein ZEAMMB73_939103 [Zea m... 64 9e-08
ref|NP_001183435.1| hypothetical protein [Zea mays] gi|238011504... 64 9e-08
ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_004242848.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|NP_001042312.1| Os01g0199900 [Oryza sativa Japonica Group] g... 62 2e-07
ref|XP_002457172.1| hypothetical protein SORBIDRAFT_03g002690 [S... 62 2e-07
gb|EEE54059.1| hypothetical protein OsJ_00755 [Oryza sativa Japo... 62 2e-07
gb|EEC70118.1| hypothetical protein OsI_00781 [Oryza sativa Indi... 62 2e-07
>ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Solanum tuberosum]
Length = 761
Score = 91.7 bits (226), Expect = 3e-16
Identities = 42/95 (44%), Positives = 62/95 (65%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R ++ H+V N L++MYC+ LL E + +RGN N+ +WN+M + Y K GL CID
Sbjct: 345 RRNYDEDHMVSNTLLAMYCKLRLLNLAEKIFNRGNGQNTEAWNVMAIGYWKDGLEAKCID 404
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF +M + GVE D N + SVISSCS+L + +L ++
Sbjct: 405 LFRDMQYLGVESDVNSLISVISSCSRLEKLRLGQS 439
>ref|XP_004250511.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Solanum lycopersicum]
Length = 646
Score = 91.3 bits (225), Expect = 4e-16
Identities = 41/95 (43%), Positives = 62/95 (65%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R ++ H+V N L++MYC+ LL E + + GN N+ +WN+M + Y K GL NCID
Sbjct: 230 RRNYDEDHMVGNALLAMYCKLRLLNLAEKIFNGGNEQNTEAWNVMTIGYWKAGLEANCID 289
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF +M + G+E D N + SVISSCS+L + +L ++
Sbjct: 290 LFRDMQYLGMESDVNSLISVISSCSRLEKFRLGES 324
>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 88.6 bits (218), Expect = 3e-15
Identities = 45/95 (47%), Positives = 56/95 (58%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R + +VQN L+SMYC+FG L E R N N +WN+MV Y K GL CI
Sbjct: 696 RRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIG 755
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF EM G+E D N + SV+SSCSQLG LA++
Sbjct: 756 LFREMQCLGIESDSNSLVSVVSSCSQLGATHLARS 790
>gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 784
Score = 84.7 bits (208), Expect = 4e-14
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R +F +V N L+SMYC+FGLL+ E L N SWNIMV Y K G I+
Sbjct: 369 RRNFLLDQIVHNALLSMYCKFGLLSIAEKLFGIIPNCNKESWNIMVSGYCKNGQEEQSIE 428
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLG 269
LF EM H G+E D N SVI SCS+LG
Sbjct: 429 LFREMQHLGIETDLNSFVSVIFSCSELG 456
>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 70.5 bits (171), Expect = 7e-10
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R + +V N L+SMYC+FG+L+ E L R S + WN M++ Y + G + CI
Sbjct: 343 RRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEY-WNFMIVGYGRIGKNVKCIQ 401
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF EM + G+ + I S I+SC QLG+ L ++
Sbjct: 402 LFREMQYLGIRSESVGIVSAIASCGQLGEINLGRS 436
>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 68.2 bits (165), Expect = 4e-09
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDR-GNYSNSHSWNIMVLKYAKGGLHRNCI 356
R F V N L+SMYC+F LL+ E L R N +WN M+ Y K H CI
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 355 DLFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
+LF ++ + G+E D SVISSCS +G L K+
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
>gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis]
Length = 778
Score = 66.2 bits (160), Expect = 1e-08
Identities = 37/95 (38%), Positives = 52/95 (54%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R D+ +V N L+ MY +FGLL E L + S + M+ Y+K G CI+
Sbjct: 363 RRDYLLGEMVHNSLLFMYSKFGLLNIAEKLFSKMRQWTKESCSTMISGYSKIGHSAKCIE 422
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF EM GVE + + + SVISSC QLG +L ++
Sbjct: 423 LFREMHLLGVEVNSDSLVSVISSCCQLGATRLGRS 457
>ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutrema salsugineum]
gi|557087262|gb|ESQ28114.1| hypothetical protein
EUTSA_v10018157mg [Eutrema salsugineum]
Length = 776
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/95 (40%), Positives = 52/95 (54%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCID 353
R F V + L+SMYC+F LL+ E L G N +WN MV Y K + CI+
Sbjct: 362 RHCFTLDGTVCDSLLSMYCKFELLSVAEKLFCSGE-GNKEAWNTMVKGYGKMKCNVKCIE 420
Query: 352 LFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
LF ++ + G+E D + SVISSCS +G L K+
Sbjct: 421 LFRKIQNLGIEVDSASLASVISSCSHIGAVLLGKS 455
>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -1
Query: 508 VVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCIDLFIEMLHQ 329
+ N L+SMYC+FG L + + + +S W+ M+L Y+ G CI EML
Sbjct: 347 ITHNALLSMYCKFGHLGTANKIF-HSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLL 405
Query: 328 GVECDFNCIFSVISSCSQLG 269
G E D N + SVISSCSQ+G
Sbjct: 406 GREPDLNSLVSVISSCSQVG 425
>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -1
Query: 508 VVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCIDLFIEMLHQ 329
+ N L+SMYC+FG L + + + +S W+ M+L Y+ G CI EML
Sbjct: 377 ITHNALLSMYCKFGHLGTANKIF-HSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLL 435
Query: 328 GVECDFNCIFSVISSCSQLG 269
G E D N + SVISSCSQ+G
Sbjct: 436 GREPDLNSLVSVISSCSQVG 455
>ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutrema salsugineum]
gi|557106078|gb|ESQ46403.1| hypothetical protein
EUTSA_v10000054mg [Eutrema salsugineum]
Length = 779
Score = 64.7 bits (156), Expect = 4e-08
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = -1
Query: 532 REDFHATHVVQNGLISMYCRFGLLTSVESLLDR-GNYSNSHSWNIMVLKYAKGGLHRNCI 356
R F V N L+SMYC+F LL E L R N +WN MV Y + CI
Sbjct: 363 RHCFSLDGTVCNSLLSMYCKFELLPVAEKLFCRIREEGNREAWNTMVKGYGQLKCDVKCI 422
Query: 355 DLFIEMLHQGVECDFNCIFSVISSCSQLGQGQLAKA 248
+LF ++L+ G+E D + SVISSCS +G L K+
Sbjct: 423 ELFRQILNIGIEIDSASLASVISSCSHVGAVLLGKS 458
>ref|XP_006826681.1| hypothetical protein AMTR_s00137p00065490 [Amborella trichopoda]
gi|548831082|gb|ERM93918.1| hypothetical protein
AMTR_s00137p00065490 [Amborella trichopoda]
Length = 513
Score = 63.9 bits (154), Expect = 7e-08
Identities = 32/91 (35%), Positives = 47/91 (51%)
Frame = -1
Query: 541 YTEREDFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRN 362
Y R D V++ L+ +Y +FG L + + DR + N SW+ MV YA+ G +
Sbjct: 220 YVIRRDIKVDVVLETSLVDLYVKFGFLERAQRMFDRMDDRNLVSWSAMVSGYAQNGFAAD 279
Query: 361 CIDLFIEMLHQGVECDFNCIFSVISSCSQLG 269
I FIEM +G D + SV+ +CS LG
Sbjct: 280 AISFFIEMQEEGFSPDVVALVSVLLACSHLG 310
>tpg|DAA52931.1| TPA: hypothetical protein ZEAMMB73_939103 [Zea mays]
Length = 369
Score = 63.5 bits (153), Expect = 9e-08
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDAATLEK+EK+G+DCEPKASTI IIQ
Sbjct: 144 LTVEIEHVDAATLEKLEKQGVDCEPKASTITIIQ 177
>ref|NP_001183435.1| hypothetical protein [Zea mays] gi|238011504|gb|ACR36787.1| unknown
[Zea mays] gi|414875799|tpg|DAA52930.1| TPA:
hypothetical protein ZEAMMB73_939103 [Zea mays]
Length = 634
Score = 63.5 bits (153), Expect = 9e-08
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDAATLEK+EK+G+DCEPKASTI IIQ
Sbjct: 144 LTVEIEHVDAATLEKLEKQGVDCEPKASTITIIQ 177
>ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Solanum tuberosum]
Length = 622
Score = 62.4 bits (150), Expect = 2e-07
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = -1
Query: 526 DFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCIDLF 347
DFH H LI+MY RFG + + D + + SWN M+ YA+ G R + LF
Sbjct: 164 DFHVGH----SLITMYSRFGKMGFARKVFDEISQRDLVSWNSMISGYAQTGCSREAVGLF 219
Query: 346 IEMLHQGVECDFNCIFSVISSCSQLGQGQLAK 251
+EM + G E D + SV+ +C LG L K
Sbjct: 220 MEMRNDGFEPDERSLVSVLVACGDLGDVNLGK 251
>ref|XP_004242848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like isoform 1 [Solanum lycopersicum]
gi|460394517|ref|XP_004242849.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g34400-like isoform 2 [Solanum lycopersicum]
Length = 622
Score = 62.4 bits (150), Expect = 2e-07
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = -1
Query: 526 DFHATHVVQNGLISMYCRFGLLTSVESLLDRGNYSNSHSWNIMVLKYAKGGLHRNCIDLF 347
DFH H LI+MY RFG + + D + + SWN M+ YA+ G R + LF
Sbjct: 164 DFHVGH----SLITMYSRFGKMGFARKVFDEISLRDLVSWNSMISGYAQTGCSREAVGLF 219
Query: 346 IEMLHQGVECDFNCIFSVISSCSQLGQGQLAK 251
+EM +G E D + SV+ +C LG L K
Sbjct: 220 MEMRDEGFEPDERSLVSVLVACGDLGDVNLGK 251
>ref|NP_001042312.1| Os01g0199900 [Oryza sativa Japonica Group]
gi|56202109|dbj|BAD73201.1| putative
phosphoribosylaminoimidazole carboxylase, chloroplast
precursor [Oryza sativa Japonica Group]
gi|66274576|dbj|BAD98622.1| putative
phosphoribosylaminoimidazole carboxylase, chloroplast
precursor [Oryza sativa Japonica Group]
gi|113531843|dbj|BAF04226.1| Os01g0199900 [Oryza sativa
Japonica Group] gi|215686919|dbj|BAG90789.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 631
Score = 62.4 bits (150), Expect = 2e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDA TLEK+EK+GIDCEPKASTI IIQ
Sbjct: 136 LTVEIEHVDAVTLEKLEKQGIDCEPKASTIMIIQ 169
>ref|XP_002457172.1| hypothetical protein SORBIDRAFT_03g002690 [Sorghum bicolor]
gi|241929147|gb|EES02292.1| hypothetical protein
SORBIDRAFT_03g002690 [Sorghum bicolor]
Length = 637
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDAATLE++EK+G+DCEPKASTI IIQ
Sbjct: 147 LTVEIEHVDAATLERLEKQGVDCEPKASTIMIIQ 180
>gb|EEE54059.1| hypothetical protein OsJ_00755 [Oryza sativa Japonica Group]
Length = 629
Score = 62.4 bits (150), Expect = 2e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDA TLEK+EK+GIDCEPKASTI IIQ
Sbjct: 136 LTVEIEHVDAVTLEKLEKQGIDCEPKASTIMIIQ 169
>gb|EEC70118.1| hypothetical protein OsI_00781 [Oryza sativa Indica Group]
Length = 499
Score = 62.4 bits (150), Expect = 2e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = -1
Query: 103 ITVEIEHVDAATLEKMEKRGIDCEPKASTIKIIQ 2
+TVEIEHVDA TLEK+EK+GIDCEPKASTI IIQ
Sbjct: 15 LTVEIEHVDAVTLEKLEKQGIDCEPKASTIMIIQ 48