BLASTX nr result

ID: Rheum21_contig00019314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00019314
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [V...    65   9e-09
gb|EOY22094.1| Teosinte branched 1, putative [Theobroma cacao]         64   2e-08
gb|ESW27218.1| hypothetical protein PHAVU_003G183700g [Phaseolus...    58   2e-06
gb|EOY03699.1| Plastid transcription factor 1, putative isoform ...    58   2e-06
emb|CBI21213.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_002277074.1| PREDICTED: transcription factor TCP13 [Vitis...    58   2e-06
emb|CAN79810.1| hypothetical protein VITISV_014914 [Vitis vinifera]    58   2e-06

>ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [Vitis vinifera]
          Length = 383

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNHYP----------GSTQQ 158
           LP L+NNS   PY +F HW+PSSLSLSQFGSHGF   SE S++             S  Q
Sbjct: 240 LPGLLNNSM--PYNSFGHWEPSSLSLSQFGSHGFPSQSEVSHNNVAVPLPSPLALSSGSQ 297

Query: 159 LLFCPPSMPTATASLFPQSD---TSAAAFHPSGSGRLHSAGSSHQYRQAD*LI 308
           L FCP +    T  LFP      T+     P     L    SS Q+ Q + L+
Sbjct: 298 LFFCPNA---TTPPLFPPYSSYITTQVESSPRHFNHLQLLSSSSQHMQPNSLM 347


>gb|EOY22094.1| Teosinte branched 1, putative [Theobroma cacao]
          Length = 369

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNH------YPGS------- 149
           LP L N  T  P+ ++YHW+PSSLSLSQFG+HGFL  +E   H       P S       
Sbjct: 222 LPGLSN--TAMPFNSYYHWEPSSLSLSQFGNHGFLSQTENFLHGNTTVPLPSSLALPSAH 279

Query: 150 TQQLLFCPPS-MPTATASLFP 209
             QL FCPPS MP    SLFP
Sbjct: 280 APQLFFCPPSTMP----SLFP 296


>gb|ESW27218.1| hypothetical protein PHAVU_003G183700g [Phaseolus vulgaris]
          Length = 366

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/103 (38%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
 Frame = +3

Query: 3   NFLPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPS---------EESNHYPGSTQ 155
           ++LP L NN+    + +++H +PSSLSLS  GSHG  P             SN Y  S  
Sbjct: 227 SYLPGLSNNAMT--HNSYHHSEPSSLSLSHLGSHGLFPSHSSSGSGVQFSSSNFYGASGP 284

Query: 156 QLLFCPPSMPTATASLFPQSDTSAAAFHPSGSGRLHSAGSSHQ 284
           QLLFCPPS   AT S F   +T      P  S  +    SS Q
Sbjct: 285 QLLFCPPS---ATPSAFYSVETD-----PRQSNNVQIFSSSSQ 319


>gb|EOY03699.1| Plastid transcription factor 1, putative isoform 1 [Theobroma
           cacao] gi|508711803|gb|EOY03700.1| Plastid transcription
           factor 1, putative isoform 1 [Theobroma cacao]
          Length = 366

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNHYP----------GSTQQ 158
           LP+L+NN+   PYG++YH++PS+  L+  GSHGF   +E+ +++            S  Q
Sbjct: 220 LPALLNNAM--PYGSYYHFEPSNFPLAHLGSHGFGSHAEDLHNFNVVPLPSTLSLSSGSQ 277

Query: 159 LLFCPPSMPTATASLFPQSDTSAAAFHP 242
           +L CPP    AT  LFP   T++    P
Sbjct: 278 ILVCPPG---ATQPLFPPHATASLEIDP 302


>emb|CBI21213.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNHYP----------GSTQQ 158
           LP L+++S   PYG +YH +PS+LSLS  GSHG    +E+ +++            S  Q
Sbjct: 297 LPGLLSSSM--PYGPYYHLEPSNLSLSTLGSHGLTSQTEDLHNFSVVPLPSSLSLTSGSQ 354

Query: 159 LLFCPPSMPTATASLFPQSDTSAAAFHPSGSGRLHSAGSSHQYRQAD*LIKVRGNVRMPP 338
           +L CPP    AT S FP    ++  F P          SS Q         +  N   PP
Sbjct: 355 VLVCPPG---ATQSYFPPHVPTSMEFDPRQINHFQLLSSSSQ--------NILPNALTPP 403

Query: 339 KFNLSRTI 362
            +++ + +
Sbjct: 404 LYSIGQPV 411


>ref|XP_002277074.1| PREDICTED: transcription factor TCP13 [Vitis vinifera]
          Length = 349

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNHYP----------GSTQQ 158
           LP L+++S   PYG +YH +PS+LSLS  GSHG    +E+ +++            S  Q
Sbjct: 209 LPGLLSSSM--PYGPYYHLEPSNLSLSTLGSHGLTSQTEDLHNFSVVPLPSSLSLTSGSQ 266

Query: 159 LLFCPPSMPTATASLFPQSDTSAAAFHPSGSGRLHSAGSSHQYRQAD*LIKVRGNVRMPP 338
           +L CPP    AT S FP    ++  F P          SS Q         +  N   PP
Sbjct: 267 VLVCPPG---ATQSYFPPHVPTSMEFDPRQINHFQLLSSSSQ--------NILPNALTPP 315

Query: 339 KFNLSRTI 362
            +++ + +
Sbjct: 316 LYSIGQPV 323


>emb|CAN79810.1| hypothetical protein VITISV_014914 [Vitis vinifera]
          Length = 353

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
 Frame = +3

Query: 9   LPSLMNNSTMAPYGNFYHWDPSSLSLSQFGSHGFLPPSEESNHYP----------GSTQQ 158
           LP L+++S   PYG +YH +PS+LSLS  GSHG    +E+ +++            S  Q
Sbjct: 209 LPGLLSSSM--PYGPYYHLEPSNLSLSTLGSHGLTSQTEDLHNFSVVPLPSSLSLTSGSQ 266

Query: 159 LLFCPPSMPTATASLFPQSDTSAAAFHPSGSGRLHSAGSSHQYRQAD*LIKVRGNVRMPP 338
           +L CPP    AT S FP    ++  F P          SS Q         +  N   PP
Sbjct: 267 VLVCPPG---ATQSYFPPHVPTSMEFDPRQINHFQLLSSSSQ--------NILPNALTPP 315

Query: 339 KFNLSRTI 362
            +++ + +
Sbjct: 316 LYSIGQPV 323


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