BLASTX nr result
ID: Rheum21_contig00019268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019268
(735 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663... 64 5e-08
ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243... 64 7e-08
ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660... 63 9e-08
ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259... 62 2e-07
ref|XP_006598659.1| PREDICTED: uncharacterized protein LOC102659... 62 2e-07
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A... 61 4e-07
ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [S... 60 7e-07
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606... 60 7e-07
ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248... 60 1e-06
ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258... 60 1e-06
ref|XP_004234894.1| PREDICTED: uncharacterized protein LOC101250... 59 2e-06
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript... 59 2e-06
ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcript... 58 4e-06
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 57 6e-06
gb|EEE56168.1| hypothetical protein OsJ_05086 [Oryza sativa Japo... 57 6e-06
gb|ABK28243.1| unknown [Arabidopsis thaliana] 57 6e-06
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 57 6e-06
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 57 8e-06
ref|XP_002329612.1| predicted protein [Populus trichocarpa] 57 8e-06
>ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663778 [Glycine max]
Length = 145
Score = 63.9 bits (154), Expect = 5e-08
Identities = 37/127 (29%), Positives = 59/127 (46%)
Frame = +1
Query: 22 WLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQGINI 201
W G LPT +L +G++ C C E DHL+F CSV+ DV +VL+W +
Sbjct: 4 WQACHGRLPTKDRLLRFGMLGDKICCFCEGP-ESHDHLFFGCSVLGDVWKQVLKWIQVKH 62
Query: 202 RNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIFQDKVMDAAQCAACV 381
+ +W + + + LA+T VY WK RN IF++ ++D +
Sbjct: 63 HPQEWNEELKWIIRHGKGKGHKASILKLAVTETVYGIWKYRNAKIFEE-IVDNTNIVDYI 121
Query: 382 IEECKFR 402
I+ +R
Sbjct: 122 IDNIVYR 128
>ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243694 [Solanum
lycopersicum]
Length = 177
Score = 63.5 bits (153), Expect = 7e-08
Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +1
Query: 13 FICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQG 192
F W+ L T +L WG+V C LC A E DHL+ C ++V RVL W G
Sbjct: 33 FTLWILLNRKLATIDRLAKWGVVHDPTCVLCKGADESLDHLFLQCHYAEEVWERVLTWAG 92
Query: 193 I-NIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIFQDKVMDAAQC 369
N R + + + W Q + + M VY W RN+ IF+DK
Sbjct: 93 FYNNRPRTWIQFMHWSIQNGKGKTTKAQLFKKIMAEGVYAIWNERNKRIFEDK------- 145
Query: 370 AACVIEE 390
C+I+E
Sbjct: 146 -KCLIDE 151
>ref|XP_006595463.1| PREDICTED: uncharacterized protein LOC102660851 [Glycine max]
Length = 199
Score = 63.2 bits (152), Expect = 9e-08
Identities = 32/106 (30%), Positives = 46/106 (43%)
Frame = +1
Query: 22 WLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQGINI 201
W+ G LPT +LH +G++ C LC E HL+F C + + V +VL W +N
Sbjct: 59 WMVCHGRLPTMDRLHRFGMIQETICKLCKEKNESLTHLFFECGMTKTVWDQVLHWLNLNH 118
Query: 202 RNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIF 339
R + +W + LA T VY W RN +F
Sbjct: 119 RIKGWNEELDWIISQTGKKGWRASILKLAFTEAVYGIWHHRNGTVF 164
>ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259935 [Solanum
lycopersicum]
Length = 189
Score = 62.4 bits (150), Expect = 2e-07
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K F W+ L T +L WG+ DC +C A E +HL+ C + + R+L+
Sbjct: 47 KAGFTLWILMNRKLATVDRLTKWGMALHRDCVMCKRAEESMEHLFIQCHYAEAIWERLLR 106
Query: 184 WQGINIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGI----VYHSWKMRNEVIFQDK 348
W IN+ +N W E+ C +N + G+ VY W RN+ IF++K
Sbjct: 107 W--INVHSNMPKSWTEFIQWC-VKNGKGKTVRAQVFKGVLAEGVYGLWSERNKRIFEEK 162
>ref|XP_006598659.1| PREDICTED: uncharacterized protein LOC102659749 [Glycine max]
Length = 686
Score = 62.0 bits (149), Expect = 2e-07
Identities = 33/108 (30%), Positives = 52/108 (48%)
Frame = +1
Query: 22 WLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQGINI 201
WL L T ++L + L+ + C+LC ED DHL F+C V + + VL+W I+
Sbjct: 545 WLACQNRLATKTRLKNMNLIQCSLCSLCKEQDEDLDHLMFSCRVTKAIWLEVLKWMDIDH 604
Query: 202 RNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIFQD 345
D W Q + + LA + +VY +W RN V+F++
Sbjct: 605 TPQMWRDEVRWVMQYTKGKGWKKEILKLAFSKVVYGTWIYRNRVVFEN 652
>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 487
Score = 60.8 bits (146), Expect = 4e-07
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +1
Query: 22 WLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQGINI 201
WL G L T +L +G + C LC S E DHL+ +C D V + GI
Sbjct: 179 WLLLRGRLKTRDRLSKFGYIDDNSCPLCDSDNETADHLFGHC----DFTTEVFRLAGI-- 232
Query: 202 RNNSLMDWWEWFAQCRRRN--NNIYKCKLLAMTGIVY-HSWKMRNEVIFQDKVMDAAQCA 372
++LMDW E + + R N Y L A I+Y WK RN+ IF+D + A A
Sbjct: 233 --SALMDWHEGYLKVLREMFINQPYDKFLFAKVLIIYWQIWKARNDTIFRDVITTATNVA 290
Query: 373 A 375
A
Sbjct: 291 A 291
>ref|XP_002461200.1| hypothetical protein SORBIDRAFT_02g042745 [Sorghum bicolor]
gi|241924577|gb|EER97721.1| hypothetical protein
SORBIDRAFT_02g042745 [Sorghum bicolor]
Length = 230
Score = 60.1 bits (144), Expect = 7e-07
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K F WL G L TA + GL A CALC E DHL C +DV R+L
Sbjct: 78 KMKFFFWLALHGRLWTAERRRRHGLRAEAACALCSQHDETVDHLLIACVFSRDVWSRLLM 137
Query: 184 WQGI----NIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIV-YHSWKMRNEVIFQDK 348
G+ ++L DWW R++ + + C +M IV ++ WK RN+ F +
Sbjct: 138 RAGLLRLTPTDGSALQDWW---ISSRQQIPHSFCCAFDSMVIIVSWNVWKERNDRTFNGR 194
Query: 349 VMDAAQCAACVIEECK 396
Q +++E +
Sbjct: 195 DRTIVQVCGAILDEIR 210
>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
orf147a [Beta vulgaris subsp. vulgaris]
Length = 147
Score = 60.1 bits (144), Expect = 7e-07
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +FI WLT L L T +L +G+V C LC + E DHL+F C ++ +L
Sbjct: 13 KCTFITWLTILDRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIWSSLLC 72
Query: 184 WQGINIRNNSLMDWWEWFAQCRRRNNNIYKCKL-LAMTGIVYHSWKMRNEVIFQDKVM 354
W GI + DW ++N+ C + ++ VY W+ RN FQ M
Sbjct: 73 WLGI---QRTAGDWQGVLQSAHCQSNSSASCIFRMCISIAVYFIWRERNARKFQQVKM 127
>ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248660 [Solanum
lycopersicum]
Length = 187
Score = 59.7 bits (143), Expect = 1e-06
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K F W+ L T +L WG++ C +C A E +HL+ +C + + R+L+
Sbjct: 47 KACFTLWILMNRKLATVDRLTKWGMILDRGCVMCKRAEESMEHLFIHCHYAEAIWERLLR 106
Query: 184 WQGINIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGI----VYHSWKMRNEVIFQDK 348
W IN++ N W ++ C +N + GI VY W RN+ IF++K
Sbjct: 107 W--INVQINMPKSWTDFIQWC-VKNGKGKTARAQMFKGILAEGVYGLWSKRNKRIFEEK 162
>ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258732 [Solanum
lycopersicum]
Length = 177
Score = 59.7 bits (143), Expect = 1e-06
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +1
Query: 13 FICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQG 192
F W+ L T ++ WG+ C +C A E DHL+ C ++V RVL W G
Sbjct: 33 FTLWILLNRKLATIHRIAKWGVAHDPICVMCKGADESLDHLFLQCHYAEEVWERVLTWAG 92
Query: 193 -INIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIFQDKVMDAAQC 369
N R + + + W + + MT VY W RN+ IF+DK
Sbjct: 93 FFNNRPRTWIQFMHWSIHNGKGKTTKAQLFKTIMTEGVYAIWNERNKRIFEDK------- 145
Query: 370 AACVIEE 390
C+I+E
Sbjct: 146 -KCLIDE 151
>ref|XP_004234894.1| PREDICTED: uncharacterized protein LOC101250379 [Solanum
lycopersicum]
Length = 164
Score = 58.5 bits (140), Expect = 2e-06
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 13 FICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQG 192
F W+ LPT +L WG+V + C LC SA E +H++ C + V R+L W
Sbjct: 50 FTLWIMLNRKLPTIDRLAKWGMVLNKACVLCKSADESIEHIFIQCHYARKVWERLLDW-- 107
Query: 193 INIRNNSLMDW---WEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIFQDK 348
I+ + M W +W Q + + + VY W RN+ IF+DK
Sbjct: 108 IDNHSRCPMTWSQFMQWSIQHGKGKTKSAQLFKSILAEGVYGLWNERNKRIFEDK 162
>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 289
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +F W++ L LPT +L WG + S DC LC E DHL F+C V L
Sbjct: 139 KHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEFAAQVWR--LA 196
Query: 184 WQGINIRNNSLMDWWEWFAQCRRRNNNIYK-CKLLAMTGIVYHSWKMRNEVI 336
+ + R W E + R +++ + ++ I+Y+ W+ RN V+
Sbjct: 197 FSRLCPRQRLFCSWAELLSWMRSSSSSAPSLLRKVSAHAIIYNIWRQRNNVL 248
>ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193496|gb|AEE31617.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 210
Score = 57.8 bits (138), Expect = 4e-06
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +F W+T+L LPT ++L WG+ C LC ED DHL+ C
Sbjct: 60 KHAFHMWVTNLDRLPTKTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEF------ACFL 113
Query: 184 WQGINIRN----------NSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEV 333
W +++R N LMDW +R + + L + ++Y WK RN
Sbjct: 114 WHTVSVRLELPAFSFVVWNDLMDW-----TLQRNRRSPPTLRKLIVQSVLYAIWKQRNNF 168
Query: 334 I 336
+
Sbjct: 169 L 169
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 57.0 bits (136), Expect = 6e-06
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +FICW+ + L T +L +WGL A+C LC++ + HL+F C V
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVV------ 194
Query: 184 WQGINIRNN-----SLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNE 330
W+ N LMD W R NI LA VY W+ RN+
Sbjct: 195 WRFFTASTNLNPPAQLMDCLNWLLS-PSREKNICLIIRLAFHSCVYAIWRERNQ 247
>gb|EEE56168.1| hypothetical protein OsJ_05086 [Oryza sativa Japonica Group]
Length = 169
Score = 57.0 bits (136), Expect = 6e-06
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K F WL + GH TA L G C LC E HL C Q V + +
Sbjct: 20 KVRFFLWLAAKGHCSTADNLEKKGWPHEEHCVLCQREDESCSHLLLTCDYTQRVWLLMKK 79
Query: 184 WQGINI-----RNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHS-WKMRNEVIFQD 345
W GI+ +L DWW RR Y+ ++ ++ S WK RN IF+
Sbjct: 80 WIGISFPVSGHEEENLTDWW---TNARRFFRTGYRDIFDSVVALICWSLWKERNVRIFEQ 136
Query: 346 KVMDAAQCAACVIEE 390
KV Q + EE
Sbjct: 137 KVRTPEQLVEDIKEE 151
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 57.0 bits (136), Expect = 6e-06
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +FICW+ + L T +L +WGL A+C LC++ + HL+F C V
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVV------ 194
Query: 184 WQGINIRNN-----SLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNE 330
W+ N LMD W R NI LA VY W+ RN+
Sbjct: 195 WRFFTASTNLNPPAQLMDCLNWLLS-PSREKNICLIIRLAFHSCVYAIWRERNQ 247
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 57.0 bits (136), Expect = 6e-06
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +FICW+ + L T +L +WGL A+C LC++ + HL+F C V
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVV------ 194
Query: 184 WQGINIRNN-----SLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNE 330
W+ N LMD W R NI LA VY W+ RN+
Sbjct: 195 WRFFTASTNLNPPAQLMDCLNWLLS-PSREKNICLIIRLAFHSCVYAIWRERNQ 247
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 56.6 bits (135), Expect = 8e-06
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Frame = +1
Query: 4 KWSFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQ 183
K +F W++ L LPT +L WG+ + DC LC S E DHL C V V+
Sbjct: 934 KHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSRPESRDHLLLYC-----VFSAVI- 987
Query: 184 WQGINIR---NNSLMDWWEWFAQCRRRNNNIYKCKL--LAMTGIVYHSWKMRNEVI 336
W+ + R + ++ + W R N++ L +A V+H WK RN V+
Sbjct: 988 WKLVFFRLTPSQAIFNSWAELLSWTRINSSKAPSLLRKIAAQASVFHLWKQRNNVL 1043
>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
Length = 1046
Score = 56.6 bits (135), Expect = 8e-06
Identities = 33/110 (30%), Positives = 47/110 (42%)
Frame = +1
Query: 10 SFICWLTSLGHLPTASKLHHWGLVPSADCALCHSAAEDDDHLWFNCSVIQDVAGRVLQWQ 189
SF+ W+ L T KLH +G+ C+LC ED +HL+F CS + + V
Sbjct: 889 SFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRC 948
Query: 190 GINIRNNSLMDWWEWFAQCRRRNNNIYKCKLLAMTGIVYHSWKMRNEVIF 339
I +W W + I + L+ VYH W+ RN IF
Sbjct: 949 DIPRMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARIF 998