BLASTX nr result

ID: Rheum21_contig00019247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00019247
         (200 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006435848.1| hypothetical protein CICLE_v10031111mg [Citr...    41   5e-06

>ref|XP_006435848.1| hypothetical protein CICLE_v10031111mg [Citrus clementina]
           gi|567886654|ref|XP_006435849.1| hypothetical protein
           CICLE_v10031111mg [Citrus clementina]
           gi|567886656|ref|XP_006435850.1| hypothetical protein
           CICLE_v10031111mg [Citrus clementina]
           gi|568865729|ref|XP_006486224.1| PREDICTED:
           uncharacterized protein LOC102629122 isoform X1 [Citrus
           sinensis] gi|568865731|ref|XP_006486225.1| PREDICTED:
           uncharacterized protein LOC102629122 isoform X2 [Citrus
           sinensis] gi|557538044|gb|ESR49088.1| hypothetical
           protein CICLE_v10031111mg [Citrus clementina]
           gi|557538045|gb|ESR49089.1| hypothetical protein
           CICLE_v10031111mg [Citrus clementina]
           gi|557538046|gb|ESR49090.1| hypothetical protein
           CICLE_v10031111mg [Citrus clementina]
          Length = 563

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = +2

Query: 113 TLQHVCTEWFKNPMNLFLFA*IVCVAVSG 199
           +++ +C EW +NPMN+ L A ++CVAVSG
Sbjct: 110 SIKKMCKEWIRNPMNMALLAWVICVAVSG 138



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 3   QLADEKGQL*RXXXXXXXXXXVRDRLRGIFSRKIDW-ELFSMCAQ 134
           Q+A+++ ++ R           RDRL G+F+RK+DW  +  MC +
Sbjct: 73  QIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKE 117


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