BLASTX nr result
ID: Rheum21_contig00019227
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019227
(1312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V... 285 4e-74
gb|EMJ28654.1| hypothetical protein PRUPE_ppa009666mg [Prunus pe... 269 2e-69
ref|XP_006450138.1| hypothetical protein CICLE_v10009139mg [Citr... 266 1e-68
gb|EXB94235.1| Replication factor A protein 2 [Morus notabilis] 265 4e-68
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu... 261 3e-67
ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subu... 258 4e-66
ref|XP_002527967.1| Replication protein A 30 kDa subunit, putati... 255 3e-65
ref|XP_002330767.1| predicted protein [Populus trichocarpa] gi|5... 254 6e-65
emb|CBI17841.3| unnamed protein product [Vitis vinifera] 254 7e-65
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu... 252 3e-64
ref|XP_004249402.1| PREDICTED: replication protein A 32 kDa subu... 246 2e-62
ref|XP_004242927.1| PREDICTED: replication protein A 32 kDa subu... 244 4e-62
ref|XP_006339174.1| PREDICTED: replication protein A 32 kDa subu... 243 1e-61
ref|XP_004498588.1| PREDICTED: replication protein A 32 kDa subu... 243 1e-61
ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subu... 239 2e-60
emb|CAJ13715.1| putative replication factor A [Capsicum chinense] 238 3e-60
gb|ACU17707.1| unknown [Glycine max] 236 1e-59
ref|XP_003544637.1| PREDICTED: replication protein A 32 kDa subu... 236 2e-59
ref|XP_006404980.1| hypothetical protein EUTSA_v10000282mg [Eutr... 234 5e-59
gb|EOY29191.1| Replicon protein A2, putative isoform 1 [Theobrom... 233 2e-58
>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
gi|296081770|emb|CBI20775.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 285 bits (728), Expect = 4e-74
Identities = 155/274 (56%), Positives = 202/274 (73%), Gaps = 8/274 (2%)
Frame = -3
Query: 1274 MFSSQFD---GGFXXXXXXXSDTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-YQID 1107
MFSSQFD GGF D+ +++R+ Q L+PVTVKQIS+ASHS DK +QID
Sbjct: 3 MFSSQFDPFSGGFSSSQST--DSGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQID 60
Query: 1106 GVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRL 927
GVDV+N+ LVGMV +K ERVTDV+F +DDGTG I CKRW+NE FD ++ E I +G+YVRL
Sbjct: 61 GVDVTNITLVGMVFDKSERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVRL 120
Query: 926 VGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTNDSS 747
GHL++ +VAFSV PVT+F+E++ HFIE IH HLK+S + D+L+Q
Sbjct: 121 NGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQ------P 174
Query: 746 QNAAVKVES----TPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHL 579
+A+VK ES TP +Q S Q +VDG+K +DQMVLDYLQQPS+ + +KG+HRDE+++ L
Sbjct: 175 LSASVKTESTGYQTPSSQLSAQ-SVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQL 233
Query: 578 KLSTQKIKESITCLEEEGLIYSTIDEFHFKSTST 477
K+ST+KI ESI LEEEGLIYSTIDEFH+KST++
Sbjct: 234 KISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTS 267
>gb|EMJ28654.1| hypothetical protein PRUPE_ppa009666mg [Prunus persica]
Length = 282
Score = 269 bits (688), Expect = 2e-69
Identities = 145/278 (52%), Positives = 197/278 (70%), Gaps = 15/278 (5%)
Frame = -3
Query: 1268 SSQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQISQASHSTGDKE-- 1119
SSQFD GGF + P +++R+ L+PVTVKQIS+ SH +GD++
Sbjct: 4 SSQFDSTSAFSGGGFMASQSTQFGDSTPSPAKSRETHGLVPVTVKQISE-SHQSGDEKSN 62
Query: 1118 YQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGV 939
+ I G DV+NV +VGMV +K ER TDV FTIDDGTG I C+RW+NE FD ++ + IE+G+
Sbjct: 63 FVISGADVANVSVVGMVFDKSERNTDVGFTIDDGTGRIKCRRWVNENFDSREMQEIEDGM 122
Query: 938 YVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQT 759
YVR+ GHLK FQ +VAFSV PV +F+EV+ HFIECIH HL++S + +S +Q Q+
Sbjct: 123 YVRVNGHLKVFQGVRQIVAFSVRPVKNFDEVTFHFIECIHTHLQTSKLQLQGNSATQPQS 182
Query: 758 NDSSQNAAVK-----VESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDE 594
DSS + V+ ++ P NQ S Q++VDG+K DQ+VLDYLQQPSS+ ++KG+HRDE
Sbjct: 183 VDSSLSTPVRSGSSGYQTAPSNQFSGQVSVDGIKGCDQLVLDYLQQPSSIGKEKGIHRDE 242
Query: 593 IAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFKSTS 480
+++HLK+ +KI E+I LEEEGLIYSTIDEFH+KS +
Sbjct: 243 LSQHLKVPVEKILEAIRSLEEEGLIYSTIDEFHYKSAA 280
>ref|XP_006450138.1| hypothetical protein CICLE_v10009139mg [Citrus clementina]
gi|568860158|ref|XP_006483593.1| PREDICTED: replication
protein A 32 kDa subunit A-like [Citrus sinensis]
gi|557553364|gb|ESR63378.1| hypothetical protein
CICLE_v10009139mg [Citrus clementina]
Length = 280
Score = 266 bits (680), Expect = 1e-68
Identities = 144/273 (52%), Positives = 190/273 (69%), Gaps = 13/273 (4%)
Frame = -3
Query: 1268 SSQFD-------GGFXXXXXXXS-DTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-Y 1116
SSQFD GGF S D + +R+RD Q L+PVTVK IS+ASHS DK +
Sbjct: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
Query: 1115 QIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVY 936
I+G++++NV LVG+V NK ER +DV FT+DDGTG + CKRW +E FD ++ EAI++G+Y
Sbjct: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
Query: 935 VRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTN 756
VRL+G+LK+FQ K +VAFSV PVT+F+EV+ H+IECI+ HL++S S + SQ Q
Sbjct: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
Query: 755 DSSQNAAVKV----ESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIA 588
DSS N + + T P S Q VDGLK DQM+LDYLQQPSS E ++GVH +E++
Sbjct: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
Query: 587 KHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
+ LK+ +KI +SI LE EGLIYSTIDEFH+K
Sbjct: 244 EQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
>gb|EXB94235.1| Replication factor A protein 2 [Morus notabilis]
Length = 282
Score = 265 bits (676), Expect = 4e-68
Identities = 142/279 (50%), Positives = 191/279 (68%), Gaps = 16/279 (5%)
Frame = -3
Query: 1268 SSQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQISQASHSTGDKE-Y 1116
SSQFD GGF ++ AAP +R R RL+PVTVKQIS+A HS +K +
Sbjct: 4 SSQFDSSTPFSGGGFMSSQSTQANDAAPSPARGRQTNRLIPVTVKQISEADHSGDEKSNF 63
Query: 1115 QIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVY 936
I+GV+ +NV +VGMV K ER TDV+F +DDGTG I C+RW+NE FD K+ E I++G+Y
Sbjct: 64 VINGVEAANVTMVGMVFEKTERNTDVSFFLDDGTGRISCRRWVNESFDAKEVEGIQDGMY 123
Query: 935 VRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTN 756
VR+ GHLK FQ + AFSV PVT F+E+S HFI+CIHNHL+SS S + +S +Q +T
Sbjct: 124 VRVNGHLKIFQGNRQIGAFSVRPVTKFDEISFHFIDCIHNHLQSSKSRQQGNSATQPETA 183
Query: 755 DSSQNAAVK-------VESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRD 597
D+S + ++ S+ +Q S Q++ D K DQ++LDYLQ PSS ++KG+HRD
Sbjct: 184 DASLSTPLRSGSNGYQTASSSLSQLSGQISFDAQKGCDQLILDYLQLPSSSVKEKGIHRD 243
Query: 596 EIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFKSTS 480
E+++ LK+ +KI ESI LE+EGLIYSTIDEFHFKS +
Sbjct: 244 ELSQQLKIPVEKIMESIRSLEDEGLIYSTIDEFHFKSAA 282
>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
replication protein A 32 kDa subunit A-like [Cucumis
sativus]
Length = 271
Score = 261 bits (668), Expect = 3e-67
Identities = 140/273 (51%), Positives = 193/273 (70%), Gaps = 8/273 (2%)
Frame = -3
Query: 1274 MFSS-QFDGGFXXXXXXXSDTAAPLSRNRDDQRLMPVTVKQISQASHSTGDK-EYQIDGV 1101
MFSS QFD +D+++ +++R+ L+PVTVKQIS+ASHS +K + I+GV
Sbjct: 1 MFSSTQFDSASGFTSSQTNDSSS--AKSRESPGLIPVTVKQISEASHSGEEKANFVINGV 58
Query: 1100 DVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVG 921
D++NV +VG VS K ER TD+TFT+DDGTG+IGCKRW+N+ FD Q E I++G+YVR+ G
Sbjct: 59 DITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNG 118
Query: 920 HLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSS-TSGPKVDSLSQSQTNDS-- 750
HLK FQ + AFSV PVT+F+E++ HFIECIH+HL++S K + +Q QT+DS
Sbjct: 119 HLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSIV 178
Query: 749 ---SQNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHL 579
QN + +T S Q VD KS D++VLDYLQ PSS+ +++G+H+DE+++ L
Sbjct: 179 KTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQL 238
Query: 578 KLSTQKIKESITCLEEEGLIYSTIDEFHFKSTS 480
KL +KI +SI LE+EGLIYSTIDEFHFKS +
Sbjct: 239 KLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271
>ref|XP_006361577.1| PREDICTED: replication protein A 32 kDa subunit A-like [Solanum
tuberosum]
Length = 272
Score = 258 bits (659), Expect = 4e-66
Identities = 140/273 (51%), Positives = 191/273 (69%), Gaps = 10/273 (3%)
Frame = -3
Query: 1268 SSQFD----GGFXXXXXXXS-DTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-YQID 1107
SSQ D GGF + D + +++R++ L+P+TVKQISQA S+ +K + ID
Sbjct: 4 SSQLDSFSGGGFMPSQSTQAADASRTSAKSRENPPLLPLTVKQISQAVQSSDEKSNFVID 63
Query: 1106 GVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRL 927
GVDV+NV+LVGM K ERVTDV+FTIDDGTG I C RW+N+ D K+ E I +G+YVR+
Sbjct: 64 GVDVNNVRLVGMAYKKSERVTDVSFTIDDGTGRIECTRWVNDAVDTKEVEQISDGMYVRV 123
Query: 926 VGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNH--LKSSTSGPKVDSLSQSQTND 753
GHLK FQ K +V F++ P+TD+NEV+ HF+ECI+ H + S SG LS S +
Sbjct: 124 HGHLKGFQGKTQLVVFAIRPITDYNEVATHFLECIYVHHCNRKSQSG-----LSVSTPSK 178
Query: 752 SSQNAAVKVEST--PPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHL 579
S AAV S+ NQ S +++DGLK ++++V+DYL+QPSSL ++KG+HR+EIA+HL
Sbjct: 179 SDVPAAVSAPSSGYNSNQFSANLSIDGLKGIEKIVIDYLEQPSSLAQEKGIHRNEIAQHL 238
Query: 578 KLSTQKIKESITCLEEEGLIYSTIDEFHFKSTS 480
++ +KIKE+I LE EGL+YSTIDE HFKSTS
Sbjct: 239 RVPLEKIKEAIESLESEGLVYSTIDECHFKSTS 271
>ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
gi|223532593|gb|EEF34379.1| Replication protein A 30 kDa
subunit, putative [Ricinus communis]
Length = 242
Score = 255 bits (651), Expect = 3e-65
Identities = 140/269 (52%), Positives = 181/269 (67%), Gaps = 7/269 (2%)
Frame = -3
Query: 1268 SSQFD----GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQISQASHSTGDKE--YQI 1110
SSQF+ GGF +AP +++RD Q L+PVTVKQISQASHS GD+ Y I
Sbjct: 4 SSQFESFSGGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHS-GDENSNYVI 62
Query: 1109 DGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVR 930
DGVDV+NV +VGMV +K ++VTDV FT+DDGTG IGCKRW+NE FD + E I++G+YVR
Sbjct: 63 DGVDVTNVTVVGMVFDKAQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDGMYVR 122
Query: 929 LVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTNDS 750
+ GHL++FQ + AFSV PV +F+EV+ HFI+CIH HL +S S
Sbjct: 123 VSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKS--------------- 167
Query: 749 SQNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLS 570
Q + Q +VDGLK DQ+VLDYLQQ SS+ ++KG+H DE+++ LKL
Sbjct: 168 --------------QFTKQYSVDGLKDCDQLVLDYLQQSSSMGQEKGIHMDELSQQLKLP 213
Query: 569 TQKIKESITCLEEEGLIYSTIDEFHFKST 483
KIKE+I LE+EGLIYSTIDEFH+K+T
Sbjct: 214 MDKIKETIRSLEDEGLIYSTIDEFHYKAT 242
>ref|XP_002330767.1| predicted protein [Populus trichocarpa]
gi|566178728|ref|XP_006382174.1| replication family
protein [Populus trichocarpa] gi|550337329|gb|ERP59971.1|
replication family protein [Populus trichocarpa]
Length = 282
Score = 254 bits (649), Expect = 6e-65
Identities = 132/242 (54%), Positives = 181/242 (74%), Gaps = 4/242 (1%)
Frame = -3
Query: 1196 NRDDQRLMPVTVKQISQASHSTGDKE-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDD 1020
+R+ ++PVTVKQISQAS S +K + I+GVDV+NV +VGMV NK E+ TDV+F IDD
Sbjct: 45 SRNSLGVVPVTVKQISQASQSGDEKSSFVINGVDVTNVTVVGMVFNKAEKSTDVSFVIDD 104
Query: 1019 GTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSH 840
GTG IGC+RW+ E FD+ + EA+++G+YVR++GHL+ FQD +VAFSV PVT+F+E++
Sbjct: 105 GTGRIGCRRWVTENFDKLEMEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITF 164
Query: 839 HFIECIHNHLKSSTSGPKVDSLSQSQTN--DSSQNAAVKVEST-PPNQSSVQMNVDGLKS 669
HFI+CIH+HL++S K+ + +Q + +SS N V+ T N S Q +VDGLK
Sbjct: 165 HFIDCIHSHLQNS----KLQGGASTQLHMVESSMNTPVRNGQTFTSNLMSKQFDVDGLKD 220
Query: 668 VDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
DQ+VLD LQQ SS+ ++KG+H DE+ + LKL +KIKESI LE+EGLIYSTIDEFH+K
Sbjct: 221 CDQLVLDRLQQSSSIGQEKGMHMDELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYK 280
Query: 488 ST 483
+T
Sbjct: 281 AT 282
>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 254 bits (648), Expect = 7e-65
Identities = 134/242 (55%), Positives = 172/242 (71%), Gaps = 2/242 (0%)
Frame = -3
Query: 1202 SRNRDDQRLMPVTVKQISQASHSTGDKE-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTI 1026
+RNRD Q L+P+TVKQIS+A S+ DK + IDGV+V+NV LVGMV NK ERVTDV F +
Sbjct: 34 ARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVGMVFNKAERVTDVGFML 93
Query: 1025 DDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEV 846
DDGTG I C RW+NE D K+ E I +G+YVR+ GHLK FQ K + FS+ PVTDFNE+
Sbjct: 94 DDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEI 153
Query: 845 SHHFIECIHNHLKSSTSGPKVDSLSQSQTNDSSQNAAVK-VESTPPNQSSVQMNVDGLKS 669
+ HFIECI+ H+ ++ S + +QS + + +K +++ PNQ S Q GLK
Sbjct: 154 ASHFIECIYVHIYNTKSRVQAGGPTQSHVTNPAIGTPLKGYQASQPNQFSGQYGA-GLKG 212
Query: 668 VDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
VDQ+V+DYLQQP SL D+GV RDE+A+ L + KI ESI LEEEGLIYSTIDE+H+K
Sbjct: 213 VDQLVIDYLQQPQSLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 272
Query: 488 ST 483
ST
Sbjct: 273 ST 274
>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
Length = 275
Score = 252 bits (643), Expect = 3e-64
Identities = 137/245 (55%), Positives = 172/245 (70%), Gaps = 5/245 (2%)
Frame = -3
Query: 1202 SRNRDDQRLMPVTVKQISQASHSTGDKE-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTI 1026
+RNRD Q L+P+TVKQIS+A S+ DK + IDGV+V+NV LVGMV NK ERVTDV F +
Sbjct: 34 ARNRDTQALLPLTVKQISEAFLSSDDKSNFLIDGVEVNNVTLVGMVFNKAERVTDVGFML 93
Query: 1025 DDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEV 846
DDGTG I C RW+NE D K+ E I +G+YVR+ GHLK FQ K + FS+ PVTDFNE+
Sbjct: 94 DDGTGRIDCNRWVNEAVDTKEMEGILDGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEI 153
Query: 845 SHHFIECIHNHL---KSSTSGPKVDSLSQSQTNDSSQNAAVK-VESTPPNQSSVQMNVDG 678
+ HFIECI+ H+ KS GP +QS + + +K +++ PNQ S Q G
Sbjct: 154 ASHFIECIYVHIYNTKSRAGGP-----TQSHVTNPAIGTPLKGYQASQPNQFSGQYGA-G 207
Query: 677 LKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEF 498
LK VDQ+V+DYLQQP SL D+GV RDE+A+ L + KI ESI LEEEGLIYSTIDE+
Sbjct: 208 LKGVDQLVIDYLQQPQSLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEW 267
Query: 497 HFKST 483
H+KST
Sbjct: 268 HYKST 272
>ref|XP_004249402.1| PREDICTED: replication protein A 32 kDa subunit B-like [Solanum
lycopersicum]
Length = 280
Score = 246 bits (628), Expect = 2e-62
Identities = 124/242 (51%), Positives = 174/242 (71%), Gaps = 2/242 (0%)
Frame = -3
Query: 1202 SRNRDDQRLMPVTVKQISQASHSTGDK-EYQIDGVDVSNVKLVGMVSNKVERVTDVTFTI 1026
++NRD Q L+P+TVKQIS+A S+ DK + +DGVDV+NVKLVG++ NKVERVTDV+F +
Sbjct: 36 AKNRDSQTLIPLTVKQISEAFQSSDDKTNFLVDGVDVNNVKLVGILCNKVERVTDVSFGV 95
Query: 1025 DDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEV 846
DDGTG + C RW+NE D K+ EA+ G+YVR+ GHLK F K ++A+SV PV D+NE+
Sbjct: 96 DDGTGRLDCFRWVNEAVDTKEMEAVTNGMYVRVHGHLKGFHGKKQLMAYSVRPVDDYNEI 155
Query: 845 SHHFIECIHNHLKSSTSGPKVDSLSQ-SQTNDSSQNAAVKVESTPPNQSSVQMNVDGLKS 669
++HF + I+ H +S+ + DS S SQ SS N +K + ++DG++
Sbjct: 156 AYHFAQVIYVHSYNSSLRKQHDSSSMPSQVPSSSFNTPLKGYQASASNQFPGYSMDGIRG 215
Query: 668 VDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
VD+MVLDYLQQPS L +KGVHR+++ + L+L ++KI E++ LE EGLIY+TIDEFH+K
Sbjct: 216 VDKMVLDYLQQPSCLALEKGVHRNQLVQQLQLPSEKISEALESLESEGLIYTTIDEFHYK 275
Query: 488 ST 483
ST
Sbjct: 276 ST 277
>ref|XP_004242927.1| PREDICTED: replication protein A 32 kDa subunit A-like [Solanum
lycopersicum]
Length = 272
Score = 244 bits (624), Expect = 4e-62
Identities = 132/271 (48%), Positives = 185/271 (68%), Gaps = 8/271 (2%)
Frame = -3
Query: 1268 SSQFD----GGFXXXXXXXS-DTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-YQID 1107
SSQ D GGF + D + +++R++ L+P+TVKQISQA S+ +K + ID
Sbjct: 4 SSQLDSFSGGGFMASQSTQAMDASRTSAKSRENPPLLPLTVKQISQAVQSSDEKSNFVID 63
Query: 1106 GVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRL 927
GVDV+NV+LVGM ERVTDV+FTIDDGTG I C RW+N+ D K+ E + + +YVR+
Sbjct: 64 GVDVNNVRLVGMAYKNSERVTDVSFTIDDGTGRIECTRWVNDAVDTKEVEQVSDRMYVRV 123
Query: 926 VGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTNDSS 747
GHLK FQ K +V FS+ P+T++NEV+ HF+ECI+ H + LS S + +
Sbjct: 124 HGHLKGFQGKTQLVIFSIRPITEYNEVATHFLECIYVH---HCNRKPQSGLSVSTPSKTD 180
Query: 746 QNAAVKVESTPPNQS--SVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKL 573
AAV S+ N S S +++DGLK ++++V+DYL+QPSSL ++KG+H +EIA+HL++
Sbjct: 181 VPAAVSAPSSGYNSSQFSGNLSIDGLKGIEKIVIDYLEQPSSLAQEKGIHWNEIAQHLRV 240
Query: 572 STQKIKESITCLEEEGLIYSTIDEFHFKSTS 480
+KIKE+I LE EGL+YSTIDE HFKSTS
Sbjct: 241 PLEKIKEAIESLESEGLVYSTIDECHFKSTS 271
>ref|XP_006339174.1| PREDICTED: replication protein A 32 kDa subunit B-like [Solanum
tuberosum]
Length = 280
Score = 243 bits (621), Expect = 1e-61
Identities = 122/242 (50%), Positives = 174/242 (71%), Gaps = 2/242 (0%)
Frame = -3
Query: 1202 SRNRDDQRLMPVTVKQISQASHSTGDK-EYQIDGVDVSNVKLVGMVSNKVERVTDVTFTI 1026
++NRD Q L+P+TVKQIS+A S+ DK + IDGVDV+NVKLVG++ NK+ERVTDV+F +
Sbjct: 36 AKNRDSQTLIPLTVKQISEAFQSSDDKTNFLIDGVDVNNVKLVGILCNKMERVTDVSFVV 95
Query: 1025 DDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEV 846
DDGTG + C RW+NE D K+ EA+ G+YVR+ GHLK F K ++A+SV PV D+NE+
Sbjct: 96 DDGTGRLDCFRWVNEAVDTKEMEAVTNGMYVRVHGHLKGFHGKKQLMAYSVRPVDDYNEI 155
Query: 845 SHHFIECIHNHLKSSTSGPKVDSLSQ-SQTNDSSQNAAVKVESTPPNQSSVQMNVDGLKS 669
++HF + I+ H +S+ + DS S +Q S+ N +K + ++DG++
Sbjct: 156 AYHFAQVIYVHSYNSSLRKQHDSSSMPAQVPSSAFNTPLKGYQASASNQFPGYSMDGIRG 215
Query: 668 VDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
VD+MVLD+LQQPS L +KGVHR+E+ + L+L ++KI E++ LE EGLIY+TIDEFH+K
Sbjct: 216 VDKMVLDFLQQPSCLALEKGVHRNELVQQLQLPSEKISEALDSLESEGLIYTTIDEFHYK 275
Query: 488 ST 483
ST
Sbjct: 276 ST 277
>ref|XP_004498588.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cicer
arietinum]
Length = 273
Score = 243 bits (620), Expect = 1e-61
Identities = 126/267 (47%), Positives = 180/267 (67%), Gaps = 7/267 (2%)
Frame = -3
Query: 1268 SSQFDGGFXXXXXXXSDTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-YQIDGVDVS 1092
+S F GG + AP +++RD Q L+PVTVKQIS+ASHS +K + I+GVD++
Sbjct: 9 ASAFSGGGFMSSQANDSSPAP-TKSRDSQGLVPVTVKQISEASHSGDEKSNFAINGVDLT 67
Query: 1091 NVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVGHLK 912
NV LVGMV K R TDV F +DDGTG I C+RW+NE FD K+ E I G+YVR+ GHLK
Sbjct: 68 NVTLVGMVYEKTVRETDVNFVLDDGTGRIKCRRWVNETFDTKEMEEILNGMYVRVYGHLK 127
Query: 911 NFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTNDSS----- 747
+FQ +VAFSV PVT+F+E+S HFI+CIHNHL++ K++ ++ +QT +S
Sbjct: 128 SFQGVRQLVAFSVRPVTNFDEISFHFIDCIHNHLRTKL---KMEGITSAQTPSNSSFNTP 184
Query: 746 -QNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLS 570
+NA ++ N Q + DGLK D++V++YLQQ S + +++G+H +E++K LKL
Sbjct: 185 VKNAINSSQTPSSNPGYAQYSTDGLKDCDKLVIEYLQQHSDMSDERGIHVNELSKELKLP 244
Query: 569 TQKIKESITCLEEEGLIYSTIDEFHFK 489
KI S+ L ++GL+YSTID+FH+K
Sbjct: 245 LDKIMLSLKTLGDDGLVYSTIDDFHYK 271
>ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subunit A-like [Glycine max]
Length = 277
Score = 239 bits (610), Expect = 2e-60
Identities = 129/275 (46%), Positives = 182/275 (66%), Gaps = 13/275 (4%)
Frame = -3
Query: 1274 MFS-SQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQISQASHSTGDK 1122
MFS SQFD GGF + ++P S++R+ Q L+PVTVKQIS+AS S +K
Sbjct: 1 MFSGSQFDATTAFSGGGFMSSQPSTLNDSSPAPSKSRETQGLVPVTVKQISEASQSGDEK 60
Query: 1121 E-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEE 945
+ I+GVD++NV L+GMV KVER TDV F +DDGTG I C+RW+NE FD K+ EA+
Sbjct: 61 SNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVMN 120
Query: 944 GVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDS---L 774
G+YVR+ GHLK+FQ +V FS PVT+F+E+ HFI+CIHNHL+S + S
Sbjct: 121 GMYVRVYGHLKSFQGVKQLVTFSARPVTNFDEIPFHFIDCIHNHLRSKIKMEGITSSNPS 180
Query: 773 SQSQTNDSSQNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDE 594
S S N ++A ++ N S Q +VDGLK +D++++DYL+Q S + + +G+H DE
Sbjct: 181 SGSSLNTPGKSAPNGSQAPSSNPVSAQHSVDGLKGIDKLIMDYLEQHSDMSDGRGIHVDE 240
Query: 593 IAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
+++ LKL +KIK S+ L ++G IYSTID+ H+K
Sbjct: 241 LSRELKLPMEKIKLSLKTLADDGEIYSTIDDDHYK 275
>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 238 bits (608), Expect = 3e-60
Identities = 133/290 (45%), Positives = 186/290 (64%), Gaps = 13/290 (4%)
Frame = -3
Query: 1304 TKTLRNSNRIMF--SSQFDG-----GFXXXXXXXSDTAAPLS----RNRDDQRLMPVTVK 1158
T T ++ R M+ ++QFDG G + TA+ S +NRD Q L+P+TVK
Sbjct: 10 THTQTHTERAMYGGNNQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVK 69
Query: 1157 QISQASHSTGDK-EYQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNE 981
QIS+A S+ DK + IDGVDV+NVKLVG++ NK E +T V+F +DDGTG + C RW+NE
Sbjct: 70 QISEAFQSSDDKTNFLIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNE 129
Query: 980 PFDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSS 801
D K+ EA+ G+YVR+ GHLK FQ K ++A+SV PV D+NE++ HF E I+ H +S
Sbjct: 130 AVDTKEMEALTNGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNS 189
Query: 800 TSGPKVD-SLSQSQTNDSSQNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSL 624
+ D S +Q SS N +K + N+DG+ V +MVLDYLQQPS L
Sbjct: 190 RLRKQQDSSFMSAQVPSSSFNTPLKGYQASASNQFPGFNMDGIGGVHKMVLDYLQQPSCL 249
Query: 623 EEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFKSTSTA 474
+KGVHR+E+A+ L++ ++KI ++ LE EGL+YSTID+FH+KST A
Sbjct: 250 ALEKGVHRNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGNA 299
>gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 236 bits (603), Expect = 1e-59
Identities = 130/289 (44%), Positives = 190/289 (65%), Gaps = 15/289 (5%)
Frame = -3
Query: 1310 TLTKTLRNSNRIMFSSQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQ 1155
+L+ +L +++ SQFD GGF + ++P S +R+ L+PVTVKQ
Sbjct: 7 SLSFSLSRVSKMFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQ 66
Query: 1154 ISQASHSTGDKE-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEP 978
IS+AS S +K + I+GVD++NV LVGM+ KVER TDV+F +DDGTG I C+RW+NE
Sbjct: 67 ISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEA 126
Query: 977 FDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSST 798
FD K+ EA+ +YVR+ GHLK+FQ +VAFSV PVT+F+E+ HFI+CIHNHL+S
Sbjct: 127 FDTKEMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKI 186
Query: 797 SGPKVDSLSQSQTNDSSQNAAVKVESTPPNQSS------VQMNVDGLKSVDQMVLDYLQQ 636
KV+ ++ + N SS ++ + PN+S Q +VDGLK +D++V+DYL+Q
Sbjct: 187 ---KVEGITSA--NPSSGSSLETPVKSAPNRSQASNPVCAQRSVDGLKGIDKLVMDYLEQ 241
Query: 635 PSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
S + +G+H DE+++ LKL +KIK S+ L ++G IYSTID+ H+K
Sbjct: 242 HSDRSDGRGIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYK 290
>ref|XP_003544637.1| PREDICTED: replication protein A 32 kDa subunit A-like [Glycine max]
Length = 292
Score = 236 bits (602), Expect = 2e-59
Identities = 130/289 (44%), Positives = 190/289 (65%), Gaps = 15/289 (5%)
Frame = -3
Query: 1310 TLTKTLRNSNRIMFSSQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQ 1155
+L+ +L +++ SQFD GGF + ++P S +R+ L+PVTVKQ
Sbjct: 7 SLSFSLSRVSKMFSGSQFDATTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQ 66
Query: 1154 ISQASHSTGDKE-YQIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEP 978
IS+AS S +K + I+GVD++NV LVGM+ KVER TDV+F +DDGTG I C+RW+NE
Sbjct: 67 ISEASQSGDEKSNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEA 126
Query: 977 FDRKQTEAIEEGVYVRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSST 798
FD K+ EA+ +YVR+ GHLK+FQ +VAFSV PVT+F+E+ HFI+CIHNHL+S
Sbjct: 127 FDTKEMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKI 186
Query: 797 SGPKVDSLSQSQTNDSSQNAAVKVESTPPNQSS------VQMNVDGLKSVDQMVLDYLQQ 636
KV+ ++ + N SS ++ + PN+S Q +VDGLK +D++V+DYL+Q
Sbjct: 187 ---KVEGITSA--NPSSGSSLETPVKSAPNRSQASNPVCAQHSVDGLKGIDKLVMDYLEQ 241
Query: 635 PSSLEEDKGVHRDEIAKHLKLSTQKIKESITCLEEEGLIYSTIDEFHFK 489
S + +G+H DE+++ LKL +KIK S+ L ++G IYSTID+ H+K
Sbjct: 242 HSDRSDGRGIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYK 290
>ref|XP_006404980.1| hypothetical protein EUTSA_v10000282mg [Eutrema salsugineum]
gi|557106108|gb|ESQ46433.1| hypothetical protein
EUTSA_v10000282mg [Eutrema salsugineum]
Length = 278
Score = 234 bits (598), Expect = 5e-59
Identities = 126/266 (47%), Positives = 181/266 (68%), Gaps = 6/266 (2%)
Frame = -3
Query: 1268 SSQFDGG--FXXXXXXXSDTAAPLSRNRDDQRLMPVTVKQISQASHSTGDKE-YQIDGVD 1098
+S F GG +T++ +++RD Q L+PVTVKQI++AS S G+K I+G++
Sbjct: 10 NSAFSGGGFMSSQPSQAYETSSSTAKSRDFQGLVPVTVKQIAEASQSGGEKSGIVINGIE 69
Query: 1097 VSNVKLVGMVSNK-VERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVYVRLVG 921
++NV LVG+V +K V +VT+V FT+DDGTG I CKRW+NE FD ++ E++ +G YVRL G
Sbjct: 70 LTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNESFDAREMESVLDGAYVRLNG 129
Query: 920 HLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTS--GPKVDSLSQSQTNDSS 747
HLK FQ K ++ FSV P+TDFNEV+ H+IECIH + K+S S G +V ++QS +SS
Sbjct: 130 HLKTFQGKKQLLVFSVRPITDFNEVTFHYIECIHFYSKNSESQLGQQVGDVTQSHMVNSS 189
Query: 746 QNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIAKHLKLST 567
+ + P SS + +G K++D M+LDYL+QP+ E +G+H DEIA+ LK+
Sbjct: 190 VTTN-QTTTLNPVMSSQNNDGNGRKNLDDMILDYLKQPACTERQQGIHLDEIAQQLKIPK 248
Query: 566 QKIKESITCLEEEGLIYSTIDEFHFK 489
K++ I LE +GLIYSTIDE+HFK
Sbjct: 249 NKLEGVIQSLEGDGLIYSTIDEYHFK 274
>gb|EOY29191.1| Replicon protein A2, putative isoform 1 [Theobroma cacao]
Length = 280
Score = 233 bits (593), Expect = 2e-58
Identities = 128/274 (46%), Positives = 183/274 (66%), Gaps = 13/274 (4%)
Frame = -3
Query: 1268 SSQFD-------GGFXXXXXXXSDTAAPL-SRNRDDQRLMPVTVKQISQASHSTGDKE-Y 1116
SSQFD GGF + P +R+R+ Q L+ VTVKQIS+AS S +K +
Sbjct: 4 SSQFDATSAFSGGGFMPSQPSQFANSTPSPARSRETQGLISVTVKQISEASQSGDEKSNF 63
Query: 1115 QIDGVDVSNVKLVGMVSNKVERVTDVTFTIDDGTGSIGCKRWLNEPFDRKQTEAIEEGVY 936
I+GVDV+NV +VGMV NK R +DV F +DDGTG + C RW+ E D ++ +A+E+G Y
Sbjct: 64 VIEGVDVTNVTVVGMVFNKNVRTSDVRFHLDDGTGRVECIRWVTENLDTREMDALEDGTY 123
Query: 935 VRLVGHLKNFQDKPSVVAFSVWPVTDFNEVSHHFIECIHNHLKSSTSGPKVDSLSQSQTN 756
VR+ GHL++FQ K + AFSV PVT+F+EV+ HFIECIH HL S + +LSQ Q +
Sbjct: 124 VRVNGHLQSFQGKKQLSAFSVRPVTNFDEVTCHFIECIHFHLHSKLQS-QGGALSQPQMD 182
Query: 755 DS----SQNAAVKVESTPPNQSSVQMNVDGLKSVDQMVLDYLQQPSSLEEDKGVHRDEIA 588
S + A+ ++ N SVQ + DGLK D+MVL+YLQQPS+++ + GVH +E++
Sbjct: 183 SSLSTPVRGASTGIQPALVNDFSVQHSADGLKGFDKMVLNYLQQPSNIDREMGVHVEELS 242
Query: 587 KHLKLSTQKIKESITCLEEEGLIYSTIDEFHFKS 486
+ LK +KIK++I LE+EGL+YS+ID++H+K+
Sbjct: 243 QQLKAPIEKIKDAIDVLEKEGLVYSSIDDYHYKA 276