BLASTX nr result
ID: Rheum21_contig00019157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00019157
(247 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138110.1| PREDICTED: putative exosome complex componen... 90 4e-16
ref|XP_003518749.1| PREDICTED: putative exosome complex componen... 88 1e-15
ref|XP_002318044.1| exonuclease-related family protein [Populus ... 86 7e-15
gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus... 84 1e-14
gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao] 84 1e-14
gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao] 84 1e-14
gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus pe... 84 1e-14
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ... 84 1e-14
gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus... 84 2e-14
ref|XP_006476772.1| PREDICTED: putative exosome complex componen... 83 4e-14
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr... 83 4e-14
ref|XP_002282635.1| PREDICTED: putative exosome complex componen... 83 4e-14
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809... 82 6e-14
ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycin... 82 6e-14
ref|XP_004298940.1| PREDICTED: putative exosome complex componen... 80 2e-13
ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutr... 80 4e-13
ref|XP_004241525.1| PREDICTED: putative exosome complex componen... 79 6e-13
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A... 76 5e-12
ref|XP_006347458.1| PREDICTED: putative exosome complex componen... 75 9e-12
ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana] g... 74 2e-11
>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
putative exosome complex component rrp40-like [Cucumis
sativus]
Length = 243
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
M EKPS SS + VDQPVVPGD+VLDLS M N+TIKLGGGLRQD DAI V+K GKLRFS
Sbjct: 1 MVEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFS 58
>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Glycine max] gi|571439680|ref|XP_006574927.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Glycine max]
Length = 240
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME K S SS + VDQ V PGD++LDLS MTNQTIKLGGGLRQDCDAI V K+G+LRFS
Sbjct: 1 METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFS 58
>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
gi|118482713|gb|ABK93275.1| unknown [Populus
trichocarpa] gi|222858717|gb|EEE96264.1|
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME K S S +F+D VVPGD+V+DLS+MTNQTIKLG GLRQDCDAI V K+GKLRFS
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFS 58
>gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus vulgaris]
Length = 240
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME KPS S + VDQ V PGD+VLDLS+MTNQTIKLGGGLRQDCDAI K+G+L FS
Sbjct: 1 METKPSSYSTNLVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGRLCFS 58
>gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao]
Length = 230
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME+K S S S +D VVPGD+VLDLS+MTNQTI LGGGLRQDCDAI V K+G LRFS
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFS 58
>gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao]
Length = 240
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME+K S S S +D VVPGD+VLDLS+MTNQTI LGGGLRQDCDAI V K+G LRFS
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFS 58
>gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
M EK + S SFVDQ VVPGD+VLDL++M NQTIKLGGGLRQDCDAI K+G L+FS
Sbjct: 1 MAEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFS 58
>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
gi|217074508|gb|ACJ85614.1| unknown [Medicago
truncatula] gi|355515294|gb|AES96917.1| Exosome complex
exonuclease RRP40 [Medicago truncatula]
gi|388510130|gb|AFK43131.1| unknown [Medicago
truncatula]
Length = 240
Score = 84.3 bits (207), Expect = 1e-14
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME K + SS +FVDQ V PGD+VLDLSTMTNQTIKLGGGLRQD D I V K+G+LRFS
Sbjct: 1 MESKSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFS 58
>gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
Length = 240
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME KPS + VDQ V PGD++LDLS+MTNQTIKLGGGLRQDCDAI V K+G+L FS
Sbjct: 1 METKPSSYFANLVDQLVCPGDVILDLSSMTNQTIKLGGGLRQDCDAISVMKAGRLSFS 58
>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Citrus sinensis] gi|568845839|ref|XP_006476773.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Citrus sinensis]
Length = 238
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME KPS ++ VD+ VVPGD+VLDLS+MTNQTIKLGGGLRQ+CD++ V K+GKLRFS
Sbjct: 1 MEAKPSTAN--LVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFS 56
>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gi|567894648|ref|XP_006439812.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542073|gb|ESR53051.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542074|gb|ESR53052.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME KPS ++ VD+ VVPGD+VLDLS+MTNQTIKLGGGLRQ+CD++ V K+GKLRFS
Sbjct: 1 MEAKPSTTN--LVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFS 56
>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
product [Vitis vinifera]
Length = 237
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +3
Query: 102 SFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
SFVDQ VVPGD+VLDLS M NQTIKLGGGL QDCDAI VTK+G+LRFS
Sbjct: 8 SFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFS 55
>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
max] gi|571433381|ref|XP_006572880.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X2 [Glycine
max] gi|571433383|ref|XP_006572881.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X3 [Glycine
max] gi|571433385|ref|XP_006572882.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X4 [Glycine
max]
Length = 240
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME K + S + VDQ V PGD+VLDLS M NQTIKLGGGLRQDCDAI V K+G+LRFS
Sbjct: 1 METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCDAISVMKAGRLRFS 58
>ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycine max]
gi|255636017|gb|ACU18353.1| unknown [Glycine max]
Length = 179
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
ME K + S + VDQ V PGD+VLDLS M NQTIKLGGGLRQDCDAI V K+G+LRFS
Sbjct: 1 METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCDAISVMKAGRLRFS 58
>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40-like [Fragaria
vesca subsp. vesca]
Length = 241
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +3
Query: 90 ISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
I+ +FVDQ VVPGD+VLDL+ M NQTIKLGGGLRQDCDAI K+G LRFS
Sbjct: 4 IAPANFVDQSVVPGDVVLDLTNMANQTIKLGGGLRQDCDAIAAMKAGTLRFS 55
>ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutrema salsugineum]
gi|557113676|gb|ESQ53959.1| hypothetical protein
EUTSA_v10026115mg [Eutrema salsugineum]
Length = 240
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
M+ K S+S KS +DQ VVPGD+VLDLS MTNQTIKLG GLRQD DAI ++GKL +S
Sbjct: 1 MDTKVSVSPKSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLRQDGDAISAVRAGKLSYS 58
>ref|XP_004241525.1| PREDICTED: putative exosome complex component rrp40-like [Solanum
lycopersicum]
Length = 235
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +3
Query: 93 SSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
S F+D+PVVPGD+VLDLS+MTNQTIKLGGGL+QD DA+ V K+G LRFS
Sbjct: 3 SKPCFIDKPVVPGDVVLDLSSMTNQTIKLGGGLQQDHDAVTVVKAGILRFS 53
>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
gi|548832362|gb|ERM95158.1| hypothetical protein
AMTR_s00009p00262150 [Amborella trichopoda]
Length = 240
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
M ++ S + VD V PGD+VLDL+ M NQT+KLGGGLRQ+CDAI+VTK+G+ +FS
Sbjct: 1 MTDESSSHPNTLVDHWVAPGDVVLDLTNMANQTLKLGGGLRQECDAIIVTKAGRFKFS 58
>ref|XP_006347458.1| PREDICTED: putative exosome complex component rrp40-like [Solanum
tuberosum]
Length = 235
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +3
Query: 93 SSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
S F+D+ VVPGD+VLDLS+MTNQTIKLGGGL+QD DA+ V K+G LRFS
Sbjct: 3 SKPCFIDKLVVPGDVVLDLSSMTNQTIKLGGGLQQDHDAVTVVKAGILRFS 53
>ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana]
gi|15010706|gb|AAK74012.1| At2g25350/F13B15.1
[Arabidopsis thaliana] gi|20197753|gb|AAM15233.1|
Expressed protein [Arabidopsis thaliana]
gi|20198061|gb|AAM15377.1| Expressed protein
[Arabidopsis thaliana] gi|23308267|gb|AAN18103.1|
At2g25350/F13B15.1 [Arabidopsis thaliana]
gi|330252599|gb|AEC07693.1| PNAS-3 related protein
[Arabidopsis thaliana]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 72 MEEKPSISSKSFVDQPVVPGDIVLDLSTMTNQTIKLGGGLRQDCDAIVVTKSGKLRFS 245
M + S S S +DQ VVPGD+VLDLS MTNQTIKLG GLRQD + I V ++GKLR+S
Sbjct: 1 MGTEVSTSPTSLIDQTVVPGDVVLDLSNMTNQTIKLGSGLRQDNEVISVMRAGKLRYS 58