BLASTX nr result
ID: Rheum21_contig00018950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00018950
(1208 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGQ50340.1| photosystem II protein I (chloroplast) [Rumex ace... 107 7e-21
ref|YP_008082717.1| photosystem II protein I [Prinsepia utilis] ... 101 7e-19
gb|AGM14995.1| photosystem II protein I, partial (chloroplast) [... 96 3e-17
gb|ADM92705.1| photosystem II protein I [Davidia involucrata] 95 7e-17
ref|YP_740186.1| photosystem II protein I [Liriodendron tulipife... 95 7e-17
ref|YP_003540915.1| photosystem II protein I [Phoenix dactylifer... 94 1e-16
ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum] 93 2e-16
ref|YP_008520123.1| photosystem II protein I (chloroplast) [Came... 92 3e-16
emb|CCQ71604.1| photosystem II protein I (chloroplast) [Salvia m... 92 6e-16
gb|AGJ51241.1| photosystem II protein I (chloroplast) [Solanum c... 91 7e-16
gb|AFA27641.1| photosystem II protein I, partial [Iris virginica... 91 7e-16
gb|AFA27629.1| photosystem II protein I, partial [Chamaedorea se... 91 9e-16
ref|YP_008993246.1| photosystem II protein I (chloroplast) [Magn... 90 2e-15
ref|YP_004769698.1| photosystem II protein I [Magnolia kwangsien... 90 2e-15
ref|YP_008815735.1| photosystem II protein I [Setaria italica] g... 89 3e-15
gb|AAZ04049.1| photosystem II protein I [Typha latifolia] gi|372... 89 3e-15
gb|AFA27652.1| photosystem II protein I, partial [Potarophytum r... 87 1e-14
gb|AFA27635.1| photosystem II protein I, partial [Eleusine corac... 87 1e-14
gb|AFA27636.1| photosystem II protein I, partial [Flagellaria in... 87 1e-14
gb|AFA27632.1| photosystem II protein I, partial [Cyperus altern... 87 1e-14
>gb|AGQ50340.1| photosystem II protein I (chloroplast) [Rumex acetosa]
Length = 53
Score = 107 bits (268), Expect = 7e-21
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +3
Query: 609 MGESILFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
MGESILFFTQKD GDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 MGESILFFTQKDPGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53
>ref|YP_008082717.1| photosystem II protein I [Prinsepia utilis]
gi|501418807|gb|AGL94684.1| photosystem II protein I
[Prinsepia utilis]
Length = 57
Score = 101 bits (251), Expect = 7e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +3
Query: 612 GESILFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
GESILFFT+K+LGD VMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 6 GESILFFTKKNLGDSVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 57
>gb|AGM14995.1| photosystem II protein I, partial (chloroplast) [Panax ginseng]
gi|506444521|gb|AGM15081.1| photosystem II protein I,
partial (chloroplast) [Panax ginseng]
gi|506444637|gb|AGM15167.1| photosystem II protein I,
partial (chloroplast) [Panax ginseng]
Length = 51
Score = 95.9 bits (237), Expect = 3e-17
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 627 FFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
FF +KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 5 FFPKKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>gb|ADM92705.1| photosystem II protein I [Davidia involucrata]
Length = 51
Score = 94.7 bits (234), Expect = 7e-17
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +3
Query: 627 FFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
FF++ DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 5 FFSKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_740186.1| photosystem II protein I [Liriodendron tulipifera]
gi|113200978|gb|ABI32493.1| photosystem II protein I
[Liriodendron tulipifera]
Length = 51
Score = 94.7 bits (234), Expect = 7e-17
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
L F Q DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LIFPQNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_003540915.1| photosystem II protein I [Phoenix dactylifera]
gi|294620561|gb|ADF28131.1| photosystem II protein I
(chloroplast) [Phoenix dactylifera]
Length = 51
Score = 94.0 bits (232), Expect = 1e-16
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
LF +KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFQKKKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]
Length = 51
Score = 92.8 bits (229), Expect = 2e-16
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
LFF + LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFFKKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_008520123.1| photosystem II protein I (chloroplast) [Camellia taliensis]
gi|552539656|ref|YP_008592741.1| photosystem II protein
I (chloroplast) [Camellia cuspidata]
gi|552540902|ref|YP_008592830.1| photosystem II protein
I (chloroplast) [Camellia danzaiensis]
gi|552540998|ref|YP_008592917.1| photosystem II protein
I (chloroplast) [Camellia impressinervis]
gi|552541092|ref|YP_008593095.1| photosystem II protein
I (chloroplast) [Camellia yunnanensis]
gi|552546251|ref|YP_008593006.1| photosystem II protein
I (chloroplast) [Camellia pitardii]
gi|537362474|gb|AGU44282.1| photosystem II protein I
(chloroplast) [Camellia cuspidata]
gi|537362561|gb|AGU44368.1| photosystem II protein I
(chloroplast) [Camellia danzaiensis]
gi|537362652|gb|AGU44458.1| photosystem II protein I
(chloroplast) [Camellia impressinervis]
gi|537362742|gb|AGU44547.1| photosystem II protein I
(chloroplast) [Camellia taliensis]
gi|537362832|gb|AGU44636.1| photosystem II protein I
(chloroplast) [Camellia pitardii]
gi|537362922|gb|AGU44725.1| photosystem II protein I
(chloroplast) [Camellia yunnanensis]
gi|537363012|gb|AGU44814.1| photosystem II protein I
(chloroplast) [Camellia taliensis]
Length = 51
Score = 92.4 bits (228), Expect = 3e-16
Identities = 44/48 (91%), Positives = 44/48 (91%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
LFF K GDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFFFSKKFGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>emb|CCQ71604.1| photosystem II protein I (chloroplast) [Salvia miltiorrhiza]
Length = 53
Score = 91.7 bits (226), Expect = 6e-16
Identities = 44/53 (83%), Positives = 46/53 (86%)
Frame = +3
Query: 609 MGESILFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
M + FF + LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 MEDLFSFFLKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 53
>gb|AGJ51241.1| photosystem II protein I (chloroplast) [Solanum carolinense]
Length = 54
Score = 91.3 bits (225), Expect = 7e-16
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +3
Query: 627 FFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
FF + LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 8 FFQKNHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 54
>gb|AFA27641.1| photosystem II protein I, partial [Iris virginica]
gi|374975114|gb|AFA27648.1| photosystem II protein I,
partial [Neoastelia spectabilis]
Length = 43
Score = 91.3 bits (225), Expect = 7e-16
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 639 KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 43
>gb|AFA27629.1| photosystem II protein I, partial [Chamaedorea seifrizii]
gi|374975127|gb|AFA27654.1| photosystem II protein I,
partial [Ravenea hildebrandtii]
Length = 43
Score = 90.9 bits (224), Expect = 9e-16
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 639 KDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
KDLGDCVMLTLKLFVYTVVIFF+SLFIFGFLSNDPGRNPGREE
Sbjct: 1 KDLGDCVMLTLKLFVYTVVIFFISLFIFGFLSNDPGRNPGREE 43
>ref|YP_008993246.1| photosystem II protein I (chloroplast) [Magnolia dealbata]
Length = 51
Score = 90.1 bits (222), Expect = 2e-15
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
L + DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LISPKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_004769698.1| photosystem II protein I [Magnolia kwangsiensis]
gi|400256572|ref|YP_006576099.1| PsbI (chloroplast)
[Magnolia denudata] gi|452848672|ref|YP_007474354.1|
photosystem II protein I (chloroplast) [Magnolia
officinalis] gi|452848755|ref|YP_007474436.1|
photosystem II protein I (chloroplast) [Magnolia
officinalis subsp. biloba]
gi|452848840|ref|YP_007474520.1| photosystem II protein
I (chloroplast) [Magnolia grandiflora]
gi|570759735|ref|YP_008993160.1| photosystem II protein
I (chloroplast) [Magnolia cathcartii]
gi|570759909|ref|YP_008993332.1| photosystem II protein
I (chloroplast) [Magnolia pyramidata]
gi|570759996|ref|YP_008993418.1| photosystem II protein
I (chloroplast) [Magnolia kobus]
gi|570760083|ref|YP_008993504.1| photosystem II protein
I (chloroplast) [Magnolia liliifera]
gi|570760170|ref|YP_008993590.1| photosystem II protein
I (chloroplast) [Magnolia odora]
gi|570772180|ref|YP_008993762.1| photosystem II protein
I (chloroplast) [Magnolia sinica]
gi|570772278|ref|YP_008993848.1| photosystem II protein
I (chloroplast) [Magnolia sprengeri]
gi|573972358|ref|YP_008993676.1| photosystem II protein
I (chloroplast) [Magnolia salicifolia]
gi|302424164|gb|ADL39040.1| photosystem II protein I
[Magnolia kwangsiensis] gi|343887523|gb|AEM65202.1| PsbI
[Magnolia denudata] gi|372862151|gb|AEX98235.1|
photosystem II protein I (chloroplast) [Magnolia
liliiflora] gi|372862235|gb|AEX98318.1| photosystem II
protein I (chloroplast) [Magnolia denudata]
gi|372862405|gb|AEX98486.1| photosystem II protein I
(chloroplast) [Magnolia officinalis]
gi|372862488|gb|AEX98568.1| photosystem II protein I
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862573|gb|AEX98652.1| photosystem II protein I
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862658|gb|AEX98736.1| photosystem II protein I
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862827|gb|AEX98903.1| photosystem II protein I
(chloroplast) [Magnolia grandiflora]
gi|372862997|gb|AEX99071.1| photosystem II protein I
(chloroplast) [Magnolia grandiflora]
Length = 51
Score = 90.1 bits (222), Expect = 2e-15
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
L + DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LISPKNDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>ref|YP_008815735.1| photosystem II protein I [Setaria italica]
gi|555298027|gb|AGZ13129.1| photosystem II protein I
[Setaria italica]
Length = 51
Score = 89.4 bits (220), Expect = 3e-15
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +3
Query: 624 LFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
LF +K+LGD VMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 4 LFLNKKNLGDYVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 51
>gb|AAZ04049.1| photosystem II protein I [Typha latifolia]
gi|372000539|gb|AEX65346.1| photosystem II reaction
center protein I [Anredera baselloides]
gi|372000541|gb|AEX65347.1| photosystem II reaction
center protein I [Didierea madagascariensis]
gi|372000543|gb|AEX65348.1| photosystem II reaction
center protein I [Maihuenia poeppigii]
gi|372000545|gb|AEX65349.1| photosystem II reaction
center protein I [Mollugo verticillata]
gi|372000551|gb|AEX65352.1| photosystem II reaction
center protein I [Portulaca oleracea]
gi|374975092|gb|AFA27637.1| photosystem II protein I,
partial [Fosterella caulescens]
gi|374975112|gb|AFA27647.1| photosystem II protein I,
partial [Navia saxicola] gi|374975116|gb|AFA27649.1|
photosystem II protein I, partial [Neoregelia carolinae]
gi|374975121|gb|AFA27651.1| photosystem II protein I,
partial [Pitcairnia feliciana]
gi|374975125|gb|AFA27653.1| photosystem II protein I,
partial [Puya laxa]
Length = 42
Score = 89.4 bits (220), Expect = 3e-15
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 642 DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 42
>gb|AFA27652.1| photosystem II protein I, partial [Potarophytum riparium]
Length = 44
Score = 87.4 bits (215), Expect = 1e-14
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 642 DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
+LGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 3 NLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 44
>gb|AFA27635.1| photosystem II protein I, partial [Eleusine coracana]
Length = 49
Score = 87.4 bits (215), Expect = 1e-14
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +3
Query: 621 ILFFTQKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
+++ +K+LGD VMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 1 VIYSLKKNLGDYVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 49
>gb|AFA27636.1| photosystem II protein I, partial [Flagellaria indica]
Length = 44
Score = 87.0 bits (214), Expect = 1e-14
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +3
Query: 642 DLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
+LGDC+MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 3 NLGDCIMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 44
>gb|AFA27632.1| photosystem II protein I, partial [Cyperus alternifolius]
Length = 52
Score = 87.0 bits (214), Expect = 1e-14
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +3
Query: 636 QKDLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 767
+KDLGD +MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE
Sbjct: 9 KKDLGDFIMLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGREE 52