BLASTX nr result

ID: Rheum21_contig00018517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00018517
         (659 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317395.1| predicted protein [Populus trichocarpa]            57   6e-06

>ref|XP_002317395.1| predicted protein [Populus trichocarpa]
          Length = 105

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
 Frame = +1

Query: 118 PIKVQLVSKSKSERLLQKFHDS----FDGEERGKETRPPVPQRAY-DVGSAAWTEEETVA 282
           P K+QLVSK  S+RLL KF D+    FD E+ G  + PP+ + A+       +TEEE + 
Sbjct: 24  PKKIQLVSKFVSDRLLDKFFDASEFDFDYEQSGLWS-PPIRRSAFLSSPGRIFTEEEMLG 82

Query: 283 KLRRVMEA-RGSEQGACFHVW 342
           +LR+VM+A RG    AC++VW
Sbjct: 83  RLRKVMDARRGRRHKACWNVW 103


Top