BLASTX nr result
ID: Rheum21_contig00017875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017875
(562 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,... 218 6e-55
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera] 210 2e-52
gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [... 209 5e-52
emb|CBI35789.3| unnamed protein product [Vitis vinifera] 209 5e-52
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi... 209 5e-52
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi... 206 3e-51
gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis] 206 4e-51
ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containi... 204 2e-50
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu... 203 3e-50
gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protei... 201 8e-50
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi... 201 1e-49
ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containi... 201 1e-49
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi... 198 7e-49
ref|XP_003623405.1| Pentatricopeptide repeat-containing protein ... 197 1e-48
ref|XP_004492508.1| PREDICTED: pentatricopeptide repeat-containi... 194 1e-47
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi... 193 3e-47
ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305... 185 6e-45
gb|ESW06991.1| hypothetical protein PHAVU_010G093200g [Phaseolus... 185 6e-45
ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [A... 184 1e-44
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ... 177 1e-42
>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 218 bits (556), Expect = 6e-55
Identities = 107/186 (57%), Positives = 137/186 (73%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
LL +M+ RG+CPNVV++T+L+ GYCRVGEVG+A K+FDEMRE SVVP
Sbjct: 187 LLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLL 246
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G+ L+ LWE M+ + + +VN AAF NVID+LC EG ++VF IAE MPQG
Sbjct: 247 RQGDFEHGRELMCNLWETMKDEEKNQ-SVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQG 305
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSV+ EFA++ +IDSLCRAGK HGASRI+Y+++K+ L PS VSYN++IHGL +E GCMRA
Sbjct: 306 KSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRA 365
Query: 20 YQLFEE 3
YQLFEE
Sbjct: 366 YQLFEE 371
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKV-FDEMRERSVVPXXXXXXXXXXX 387
+L +M + +C P+ V++TT++ G G +AL + + M E+ + P
Sbjct: 473 ILTDMTMGKFCAPDAVTFTTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHG 532
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+L E + + + ++ + +ID LCE GL + + + +
Sbjct: 533 LFKL-------QLAEEAMRAFKRMLAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVI 585
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
+ D+F ++ ++ LCRAGK A LY + ++P+ +SYN VI + G
Sbjct: 586 WPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVIDSACKLGMKR 645
Query: 26 RAYQLFEE 3
AYQ+ E
Sbjct: 646 EAYQVVTE 653
>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
Length = 959
Score = 210 bits (535), Expect = 2e-52
Identities = 106/186 (56%), Positives = 133/186 (71%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPN VSYTTL++GYC++GE A K+FDEM E VVP
Sbjct: 480 LFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVL 539
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
RG+ L+ +LW+ M D + +VNNAAFAN+ID+LC+EG + EVF IAE MPQG
Sbjct: 540 CKRDVERGRELMCKLWQKMM--DENDPSVNNAAFANLIDSLCKEGFFLEVFRIAEDMPQG 597
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSVS+EFA+ Q+IDSLCR G+ HGASRI+YI+RKR PS VSYN ++HGLS+EGGCMRA
Sbjct: 598 KSVSEEFAYGQMIDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRA 657
Query: 20 YQLFEE 3
YQL +E
Sbjct: 658 YQLLKE 663
Score = 58.5 bits (140), Expect = 1e-06
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEM-----------RERSVVPXX 414
+LV M+ P+V++ T++NG+C++G V +ALKV D+M +++
Sbjct: 730 VLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDMVMGKFCAPDSVTYTTIICGL 789
Query: 413 XXXXXXXXXXXXXXXXXRGKRL--------VNELWEMMRSSDYSSLTVNNAAFANVIDAL 258
K L N E+ S + N + +ID L
Sbjct: 790 LNLGRTAEALDVLRRVMPEKVLHGLFKLQQANVATEVFNSMVSDGVAANTITYTIIIDGL 849
Query: 257 CEEGLYHEVFAIAESMPQGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSS 78
E E + + V D F ++ ++ LCR+GK + A LY + + +
Sbjct: 850 FESDQIDEAKRFWDDVIWPSKVHDNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNV 909
Query: 77 VSYNAVIHGLSQEGGCMRAYQLFEE 3
V+YN +I + G AY + +E
Sbjct: 910 VNYNILIDHACKLGSKREAYTIVQE 934
>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
Length = 681
Score = 209 bits (531), Expect = 5e-52
Identities = 99/183 (54%), Positives = 130/183 (71%)
Frame = -3
Query: 551 EMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXXXXX 372
+M+ +G+CPN VSYTTL+NGYC +GE+GDA KVFDEM E+ V P
Sbjct: 179 DMLSKGHCPNAVSYTTLINGYCLIGELGDAQKVFDEMGEKGVAPNSLTYSVMIRGVLRKR 238
Query: 371 XXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGKSV 192
R K + +LWE+M+ D TV +AAFA++ID++C EG + EVF IAE MPQGKSV
Sbjct: 239 DVGRAKEWMGKLWEIMKGED--DTTVKSAAFASLIDSMCREGYFQEVFGIAEDMPQGKSV 296
Query: 191 SDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQL 12
+++FA+ Q+IDSLC+AG+ HGASRI+YI+R P SYN+++HGLS+EGGCMRAYQL
Sbjct: 297 NEDFAYGQMIDSLCKAGRHHGASRIVYIMRNAGFAPKLTSYNSILHGLSKEGGCMRAYQL 356
Query: 11 FEE 3
EE
Sbjct: 357 LEE 359
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXX 387
+L +M+ +C P+VV++TT+++G VG +AL + M E+ P
Sbjct: 461 VLNDMMTGKFCAPDVVTFTTMISGLLNVGRTEEALGLLHHVMPEKGFSPNVVTYNAVLRG 520
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
R EL+ +M S + ++ + +ID LC+ E + +
Sbjct: 521 LFKHKQA----REAMELFNLMVSD---GVAADSTTYTIIIDGLCDSDQIEEAKRFWDEVI 573
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
+ D F ++ +I +C +GKF A LY + ++P+ SYN VI + G
Sbjct: 574 WPSKIHDNFVYAAIIKGICHSGKFDEACHFLYELVDAGVSPNIYSYNIVIDAACKLGLKK 633
Query: 26 RAYQLFEE 3
AY++ +E
Sbjct: 634 EAYEVVKE 641
>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 209 bits (531), Expect = 5e-52
Identities = 105/186 (56%), Positives = 132/186 (70%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPN VSYTTL++GYC++GE A K+FDEM E VVP
Sbjct: 422 LFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVL 481
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
RG+ L+ +LW+ M D + +VNNAAFAN+ID+LC+EG + EVF IAE MPQG
Sbjct: 482 CKRDVERGRELMCKLWQKMM--DENDPSVNNAAFANLIDSLCKEGFFLEVFRIAEDMPQG 539
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSVS+EF + Q+IDSLCR G+ HGASRI+YI+RKR PS VSYN ++HGLS+EGGCMRA
Sbjct: 540 KSVSEEFVYGQMIDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRA 599
Query: 20 YQLFEE 3
YQL +E
Sbjct: 600 YQLLKE 605
Score = 55.8 bits (133), Expect = 7e-06
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXX 387
+L +MV+ +C P+ V+YTT++ G +G +AL V M E+ P
Sbjct: 707 VLDDMVMGKFCAPDSVTYTTIICGLLNLGRTEEALDVLRRVMPEKGFKPGVVTFNAVLHG 766
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+ N E+ S + N + +ID L E E + +
Sbjct: 767 LFKL-------QQANVATEVFNSMVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVI 819
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
V D F ++ ++ LCR+GK + A LY + + + V+YN +I + G
Sbjct: 820 WPSKVHDNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKR 879
Query: 26 RAYQLFEE 3
AY + +E
Sbjct: 880 EAYTIVQE 887
>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Vitis vinifera]
Length = 680
Score = 209 bits (531), Expect = 5e-52
Identities = 105/186 (56%), Positives = 132/186 (70%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPN VSYTTL++GYC++GE A K+FDEM E VVP
Sbjct: 190 LFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVL 249
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
RG+ L+ +LW+ M D + +VNNAAFAN+ID+LC+EG + EVF IAE MPQG
Sbjct: 250 CKRDVERGRELMCKLWQKMM--DENDPSVNNAAFANLIDSLCKEGFFLEVFRIAEDMPQG 307
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSVS+EF + Q+IDSLCR G+ HGASRI+YI+RKR PS VSYN ++HGLS+EGGCMRA
Sbjct: 308 KSVSEEFVYGQMIDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRA 367
Query: 20 YQLFEE 3
YQL +E
Sbjct: 368 YQLLKE 373
Score = 55.8 bits (133), Expect = 7e-06
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXX 387
+L +MV+ +C P+ V+YTT++ G +G +AL V M E+ P
Sbjct: 475 VLDDMVMGKFCAPDSVTYTTIICGLLNLGRTEEALDVLRRVMPEKGFKPGVVTFNAVLHG 534
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+ N E+ S + N + +ID L E E + +
Sbjct: 535 LFKL-------QQANVATEVFNSMVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVI 587
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
V D F ++ ++ LCR+GK + A LY + + + V+YN +I + G
Sbjct: 588 WPSKVHDNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKR 647
Query: 26 RAYQLFEE 3
AY + +E
Sbjct: 648 EAYTIVQE 655
>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum lycopersicum]
Length = 676
Score = 206 bits (524), Expect = 3e-51
Identities = 99/186 (53%), Positives = 131/186 (70%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L V+M RG+ PN VSYTTL++GYC GEVG+A K+FDEM E V+P
Sbjct: 177 LFVDMRKRGHSPNAVSYTTLIDGYCGAGEVGEAEKLFDEMSECGVIPNALTYSALIRGIL 236
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
GK+L+ +LW++M + D + VNNAAF NVI+ LC+EG +HEVF IAE MPQG
Sbjct: 237 RKRDIDHGKQLIRKLWDVMLTED--DMHVNNAAFCNVINCLCKEGFFHEVFNIAEDMPQG 294
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSV +F ++Q+IDSLCR G+++GA+RI+Y++RKR +PS VSYN ++HGL +EG C RA
Sbjct: 295 KSVVQDFVYAQMIDSLCRFGRYNGAARIVYMIRKRGFDPSLVSYNTIVHGLVKEGDCFRA 354
Query: 20 YQLFEE 3
YQL EE
Sbjct: 355 YQLLEE 360
Score = 65.5 bits (158), Expect = 9e-09
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Frame = -3
Query: 551 EMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXXXXX 378
+M++ +C PN V++TT+++G+ ++G V +AL++ M E+ + P
Sbjct: 465 DMMMGKFCAPNGVTFTTVISGFLKLGRVEEALELLHRVMPEKGLKPNVVTYNAVIQGLFK 524
Query: 377 XXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGK 198
++E E+ S + + + +ID L E E +
Sbjct: 525 LHR-------IDEAMEVFHSMVSGGIVADCTTYTVIIDGLFESNKVDEAKRFWNDVVWPS 577
Query: 197 SVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAY 18
V D + ++ ++ LCR+GK H A LY + + V+YN VI+G G AY
Sbjct: 578 KVHDSYIYAAILKGLCRSGKLHDACDFLYELADCGVTLCVVNYNIVINGACTLGWKREAY 637
Query: 17 QLFEE 3
Q+ E
Sbjct: 638 QILGE 642
>gb|EXB69102.1| hypothetical protein L484_017380 [Morus notabilis]
Length = 714
Score = 206 bits (523), Expect = 4e-51
Identities = 100/186 (53%), Positives = 135/186 (72%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L ++ RG+CPN V++TTL+NGYC+VGE+ A K+F+EM ER V P
Sbjct: 196 LFFDLQDRGHCPNAVTFTTLINGYCKVGELDCAHKMFEEMSERGVPPNSLTFSVLIRCVL 255
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
RG+ L+ +LWE M+ D SS V NAAF+N++++LC EG ++EVF+IAE MPQG
Sbjct: 256 RMRDVERGRGLMCQLWERMKCEDDSS--VKNAAFSNLVESLCREGFFNEVFSIAEDMPQG 313
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
S+++EFA++Q+IDSLC+AG+ HGASRI+YI+RKR L P VSYN+++HGL EGGCMRA
Sbjct: 314 NSLNEEFAYAQMIDSLCKAGRHHGASRIVYIMRKRGLIPCLVSYNSIVHGLCNEGGCMRA 373
Query: 20 YQLFEE 3
YQL EE
Sbjct: 374 YQLLEE 379
Score = 62.8 bits (151), Expect = 6e-08
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Frame = -3
Query: 548 MVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFD-EMRERSVVPXXXXXXXXXXXXXXXX 372
MV + P+V++YTT++ G VG + DA+ + M + V P
Sbjct: 486 MVGKFSAPDVMTYTTIIFGLLNVGRIQDAMDLLHCGMLDNGVNPGVVTYNAVLRGLFKL- 544
Query: 371 XXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGKSV 192
R NE E+ + + ++ + +ID LC+ E + + V
Sbjct: 545 ------RRANEAMEIYNTMVGRGIVADSTTYTIIIDGLCKSNQIEEAKRFWDDIIWPSRV 598
Query: 191 SDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQL 12
D F ++ ++ LCR G F A LY + ++P+ SYN +I + G AYQ+
Sbjct: 599 HDNFVYAAILKGLCRLGNFGEACHFLYELVDSGVSPNIFSYNILIDSACKLGLKDEAYQI 658
Query: 11 FEE 3
E
Sbjct: 659 VRE 661
>ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like isoform X1 [Citrus sinensis]
gi|568848405|ref|XP_006478001.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X2 [Citrus sinensis]
gi|568848407|ref|XP_006478002.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X3 [Citrus sinensis]
gi|568848409|ref|XP_006478003.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g18020-like isoform X4 [Citrus sinensis]
Length = 676
Score = 204 bits (518), Expect = 2e-50
Identities = 102/186 (54%), Positives = 130/186 (69%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+ PNVVSYTTL++GYCR GE+ A KVFDEMR V+P
Sbjct: 180 LFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVL 239
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
R L+ +LWE M+ + L+VNNAAFAN++D+LC EG +EVF IAE MPQG
Sbjct: 240 RTRDVERANVLMFKLWERMKEEE--DLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQG 297
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSV++EFA +IDSLCR+G+ HGASR++Y++RKR L PS VSYN+++HGL + GGCMRA
Sbjct: 298 KSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRA 357
Query: 20 YQLFEE 3
YQL EE
Sbjct: 358 YQLLEE 363
Score = 68.2 bits (165), Expect = 1e-09
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKV-FDEMRERSVVPXXXXXXXXXXX 387
+L +MV +C P+ V++TT++ G VG + +AL + + M +R P
Sbjct: 465 VLNDMVAGKFCAPDAVTFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRG 524
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
R V E E+ + ++ +A VID LCE E + +
Sbjct: 525 LFRL-------RRVEEAKEVFNCMLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIV 577
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
++ D + ++ +I LCR+GK + A LY + + P+ V YN VI G +
Sbjct: 578 WPSNIHDNYVYAAMIKGLCRSGKINEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKR 637
Query: 26 RAYQLFEE 3
AYQ+ E
Sbjct: 638 EAYQILRE 645
>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
gi|222869094|gb|EEF06225.1| hypothetical protein
POPTR_0015s04490g [Populus trichocarpa]
Length = 668
Score = 203 bits (516), Expect = 3e-50
Identities = 97/186 (52%), Positives = 133/186 (71%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
+L +M+ RG+CP++VSYTTL+NGY ++GE+ DA K+FDEM E VVP
Sbjct: 179 MLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVL 238
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
RG+ L++ L++ MR + S VN+AAF N++D LC EGL++EVF IAE MPQG
Sbjct: 239 RKRDIERGRELMHVLFQRMRHEEDQS--VNSAAFDNLVDCLCREGLFNEVFMIAEEMPQG 296
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
V+++FA+ +IDSLC+ G+ HGASR++YI+RK+ PS VSYN++IHGL +EGGCMRA
Sbjct: 297 NRVNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRA 356
Query: 20 YQLFEE 3
YQL EE
Sbjct: 357 YQLLEE 362
Score = 64.7 bits (156), Expect = 1e-08
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRE-RSVVPXXXXXXXXXXXX 384
+LV M+ P+V++ T++NG+C++G V +ALKV ++M + P
Sbjct: 429 VLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGL 488
Query: 383 XXXXXXXRGKRLVNELWE------------MMRSSDYSSLT----------------VNN 288
+ L+ ++ E ++R LT N+
Sbjct: 489 LNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANS 548
Query: 287 AAFANVIDALCEEGLYHEVFAIAESMPQGKSVSDEFAFSQVIDSLCRAGKFHGASRILYI 108
++ +++ LCE G + + + D+F ++ ++ LCR+G + A LY
Sbjct: 549 QTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYE 608
Query: 107 VRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQLFEE 3
+ +NP+ VSYN VI G AYQ+ E
Sbjct: 609 LVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGE 643
>gb|EOY21294.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 690
Score = 201 bits (512), Expect = 8e-50
Identities = 100/186 (53%), Positives = 130/186 (69%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L M +G PN V+YTTL++GY +G++G A K+FDEMR V P
Sbjct: 184 LFFYMKSKGQLPNAVTYTTLISGYVGIGDLGVAFKLFDEMRACGVFPNSLTYSVLICGVL 243
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
GK L+++LW+ M+ + VN+AAFAN+ID LC EG ++EVF IAESMPQG
Sbjct: 244 MKRDVANGKELMDKLWDRMKD-EKEEPAVNSAAFANLIDCLCREGYFNEVFRIAESMPQG 302
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSVS+EFA+ +IDSLCRAG+ HGASR++Y++RK+ PSSVSYN++IHGL +EGGCMRA
Sbjct: 303 KSVSEEFAYGHMIDSLCRAGRNHGASRVVYMMRKKDFVPSSVSYNSIIHGLCKEGGCMRA 362
Query: 20 YQLFEE 3
YQLFEE
Sbjct: 363 YQLFEE 368
Score = 69.3 bits (168), Expect = 6e-10
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Frame = -3
Query: 527 PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXXXXXXXXXXRGKR 351
PN V++TT++ G VG +AL V + M ER + P
Sbjct: 483 PNEVTFTTVICGLLDVGRTVEALDVLNRIMPERGLRPGVVTYNAVLCGFFKTQH------ 536
Query: 350 LVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGKSVSDEFAFS 171
NE + +T N+ +A V+D LC+ G E + + + D+F ++
Sbjct: 537 -ANEAMGVYNCMVNEGVTANSTTYAIVVDGLCQSGQIEEAKKFWDDVIWPSQIHDDFVYA 595
Query: 170 QVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQLFEE 3
++ LC AG F+ A LY + + P+ VSYN VI + G AYQ+ E
Sbjct: 596 SILKGLCHAGHFNQACHFLYELVDSGVTPNIVSYNIVIDKACKLGLRKEAYQIVGE 651
>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 681
Score = 201 bits (511), Expect = 1e-49
Identities = 102/186 (54%), Positives = 129/186 (69%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
+L +M RG+CPNVVSYT L++GYCRV V A K+FDEM V P
Sbjct: 183 VLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEMPGNYVEPNSLTYSVLINGFL 242
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
GK L+ LWE M+ SS VNNAAFA+++D+LC G +HEVF IAE MPQG
Sbjct: 243 YKRDFETGKALICNLWERMKGELDSS--VNNAAFAHLVDSLCLVGSFHEVFTIAEDMPQG 300
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
+SV +EFA+ Q+IDSLC+A ++HGASRI+YI+RK+ LNP +SYN++IHGLS+EGGCMRA
Sbjct: 301 QSVPEEFAYGQMIDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRA 360
Query: 20 YQLFEE 3
YQL E
Sbjct: 361 YQLLVE 366
Score = 63.5 bits (153), Expect = 3e-08
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKV-FDEMRERSVVPXXXXXXXXXXX 387
+L +M+ +C P+ V++TT++ G VG + ++L + + M E+ +VP
Sbjct: 468 VLNDMIGGKFCTPDHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNATIRG 527
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+ +N M+R+ + ++ +A VID LC+ EV + +
Sbjct: 528 LFKLQQ---ANQAMNTFDRMVRNG----IQADSTTYAVVIDGLCDCNQIEEVKRFWKDIV 580
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
+ D F +S ++ LC + KF+ A LY + ++P+ YN VI+ + G
Sbjct: 581 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELSDSGVSPTIFCYNIVINTACKLGLKG 640
Query: 26 RAYQLFEE 3
AY+L +E
Sbjct: 641 EAYRLVKE 648
>ref|XP_004137553.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cucumis sativus]
Length = 646
Score = 201 bits (511), Expect = 1e-49
Identities = 102/186 (54%), Positives = 129/186 (69%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
+L +M RG+CPNVVSYT L++GYCRV V A K+FDEM V P
Sbjct: 150 VLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEMPGNYVEPNSLTYSVLINGFL 209
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
GK L+ LWE M+ SS VNNAAFA+++D+LC G +HEVF IAE MPQG
Sbjct: 210 YKRDFETGKALICNLWERMKGELDSS--VNNAAFAHLVDSLCLVGSFHEVFTIAEDMPQG 267
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
+SV +EFA+ Q+IDSLC+A ++HGASRI+YI+RK+ LNP +SYN++IHGLS+EGGCMRA
Sbjct: 268 QSVPEEFAYGQMIDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRA 327
Query: 20 YQLFEE 3
YQL E
Sbjct: 328 YQLLVE 333
Score = 63.5 bits (153), Expect = 3e-08
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKV-FDEMRERSVVPXXXXXXXXXXX 387
+L +M+ +C P+ V++TT++ G VG + ++L + + M E+ +VP
Sbjct: 435 VLNDMIGGKFCTPDHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNATIRG 494
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+ +N M+R+ + ++ +A VID LC+ EV + +
Sbjct: 495 LFKLQQ---ANQAMNTFDRMVRNG----IQADSTTYAVVIDGLCDCNQIEEVKRFWKDIV 547
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
+ D F +S ++ LC + KF+ A LY + ++P+ YN VI+ + G
Sbjct: 548 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELSDSGVSPTIFCYNIVINTACKLGLKG 607
Query: 26 RAYQLFEE 3
AY+L +E
Sbjct: 608 EAYRLVKE 615
>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Solanum tuberosum]
Length = 680
Score = 198 bits (504), Expect = 7e-49
Identities = 97/186 (52%), Positives = 127/186 (68%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L V+M RG+ PN VSYTTL+ GYC VGEV +A K+F EM E V+P
Sbjct: 177 LFVDMRKRGHSPNAVSYTTLICGYCGVGEVREAEKLFAEMSECGVIPNALTYSALIRGIL 236
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
GK+L+ +LW +MR+ + + +NNAAF NVI+ LC EG +HEVF I E MPQG
Sbjct: 237 RKRGIDHGKQLIGKLWSVMRTEE--DMHINNAAFCNVINCLCREGFFHEVFNIVEDMPQG 294
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
KSV +F ++Q+IDSLCR G+++GA+RI+YI+RKR +PS VSYN ++HGL +EG C RA
Sbjct: 295 KSVFQDFVYAQMIDSLCRFGRYNGAARIVYIMRKRGFDPSLVSYNTIVHGLVKEGDCFRA 354
Query: 20 YQLFEE 3
YQL EE
Sbjct: 355 YQLLEE 360
Score = 62.8 bits (151), Expect = 6e-08
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Frame = -3
Query: 551 EMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXXXXX 378
+M++ +C P+ V++TT+++G+ ++G V +AL++ M E+ + P
Sbjct: 465 DMMMEKFCAPDGVTFTTVISGFLKLGRVEEALELLHRVMPEKGLKPNVVTYNAVIQGLFK 524
Query: 377 XXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGK 198
++E E+ S + + + +ID L E E + +
Sbjct: 525 LHR-------IDEAMEVFHSMLSGGIVADCTTYTVIIDGLFESNKVDEAKSFWNDVVWPS 577
Query: 197 SVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAY 18
V D + ++ ++ LCR+GK H A LY + + ++YN VI+G G AY
Sbjct: 578 KVHDSYIYAAILKGLCRSGKLHDACDFLYELVDCGVPLCVINYNIVINGACTLGWKREAY 637
Query: 17 QLFEE 3
Q+ E
Sbjct: 638 QILGE 642
>ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498420|gb|AES79623.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 737
Score = 197 bits (501), Expect = 1e-48
Identities = 96/186 (51%), Positives = 127/186 (68%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPNVVSYTTL+NGYC VG + DA+KVFDEM E + P
Sbjct: 132 LFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFL 191
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G+ L+ +LWE M+ D L+VN AAFAN+ID+LC+EG ++EVF IAE MP G
Sbjct: 192 RGRDFESGRELMCKLWERMKMED--ELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCG 249
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
S+ ++ + Q+IDS C+ G++HGA+RI+Y++RKR PS VSYN +IHGLS++G CMR
Sbjct: 250 SSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRG 309
Query: 20 YQLFEE 3
YQL EE
Sbjct: 310 YQLLEE 315
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXX 384
+L +M+L +C P+VV++TTL++G +V +AL +F+ V+P
Sbjct: 417 VLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNR-----VMPENGLKPGVVTYN 471
Query: 383 XXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQ 204
+ KR N+ +E+ + +T ++ + +++ LCE E + +S+
Sbjct: 472 VLIRCLYKLKR-PNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIW 530
Query: 203 GKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMR 24
+ D F ++ ++ LC +GKF+ A LY + ++P+ SYN +I+ G
Sbjct: 531 PSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILINCACNLGLKRE 590
Query: 23 AYQLFEE 3
YQ+ E
Sbjct: 591 VYQIVRE 597
>ref|XP_004492508.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Cicer arietinum]
Length = 667
Score = 194 bits (493), Expect = 1e-47
Identities = 95/186 (51%), Positives = 126/186 (67%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPNVVSYTTL+NGYC VG + DA+KVFDEM E ++ P
Sbjct: 136 LFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLECALEPNSMTYSVLIRGFL 195
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G+ L+ +LWE M+ L V AAFAN++D+LC+EG ++EVF IAE MP G
Sbjct: 196 RERDLEGGRELMCKLWERMKVE--VELGVKVAAFANLVDSLCKEGFFNEVFEIAEEMPFG 253
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
S+S+E + Q+IDS C+ G++HGA+RI+Y++RKR PS VSYN +IHGLS++G CMR
Sbjct: 254 SSLSEEVVYDQMIDSFCKVGRYHGAARIVYLMRKRGFVPSDVSYNHIIHGLSKDGACMRG 313
Query: 20 YQLFEE 3
YQL EE
Sbjct: 314 YQLLEE 319
Score = 63.2 bits (152), Expect = 4e-08
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Frame = -3
Query: 560 LLVEMVLRGYCP-NVVSYTTLMNGYCRVGEVGDALKVFDEMR-----ERSVVPXXXXXXX 399
+LV M L +C +V++ T++NG+C++G V +ALKV D+M VV
Sbjct: 386 VLVSM-LESHCKADVITLNTVINGFCKMGRVDEALKVLDDMLMGKFCAPDVVTFTTLIFG 444
Query: 398 XXXXXXXXXXXXRGKR----------------LVNELWEMMRSSDY---------SSLTV 294
R L+ L+++ + +D +T
Sbjct: 445 LLDAEKDYEALDLFNRVMPQNGLKPGVVTYNALIRGLYKLKKPNDALKVFNNMASEGITP 504
Query: 293 NNAAFANVIDALCEEGLYHEVFAIAESMPQGKSVSDEFAFSQVIDSLCRAGKFHGASRIL 114
++ + +++ LC+ E + +S+ + D F ++ ++ LC +GKF+ A L
Sbjct: 505 DSTTYTVIVEGLCKCDQIEEAKSFWQSVIWPSGIHDNFVYATILKGLCGSGKFNEACHFL 564
Query: 113 YIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQLFEE 3
Y + + P+ SYN +I+ G AYQ+F E
Sbjct: 565 YELVDSGVIPNIYSYNILINCACNLGSKSEAYQIFRE 601
>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18020-like [Fragaria vesca subsp. vesca]
Length = 682
Score = 193 bits (490), Expect = 3e-47
Identities = 95/188 (50%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
+L +M+ RG+CPN VSYTTL+NGYC +GE+ A KVFDEM ER V P
Sbjct: 174 VLFDMMSRGHCPNAVSYTTLINGYCGMGELSHAHKVFDEMCEREVAPNSMTYSVLISGVL 233
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
++ +LWE M+ D V NAAF+N+I+++C EG + EVF IAE PQG
Sbjct: 234 RKRDIRGAVEMMGKLWEAMKGED--DTLVKNAAFSNLIESMCREGYFQEVFGIAEDRPQG 291
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQ--EGGCM 27
+SV++EFA+ Q+IDSLC+AG++HGASRI+YI+R R P SYN ++HGL++ EGG M
Sbjct: 292 ESVNEEFAYGQMIDSLCKAGRYHGASRIVYIMRHRGFVPRVTSYNCIVHGLTKEGEGGVM 351
Query: 26 RAYQLFEE 3
RAYQL EE
Sbjct: 352 RAYQLLEE 359
Score = 64.3 bits (155), Expect = 2e-08
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVF-DEMRERSVVPXXXXXXXXXXX 387
+L +M+ +C PNVV++TT++NG VG +AL + D M ++ P
Sbjct: 461 VLDDMMTGKFCAPNVVTFTTIINGLLNVGRTQEALYILHDVMPQKGFRPNVVTYNAVLRG 520
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
GK+ + E+ + ++ + +ID LCE E + +
Sbjct: 521 LFKLDQ---GKQAM----EIFNGMVTEGVAASSTTYTIIIDGLCESDQLEEAKRFWDDVI 573
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
+ D F ++ +I +C +G F A LY + ++P+ SYN VI + G
Sbjct: 574 WPSQIHDNFVYAAIIKGICHSGNFDEACHFLYELVDSGVSPNIFSYNIVIDTACKLGLKK 633
Query: 26 RAYQLFEE 3
AY++ E
Sbjct: 634 EAYEVVRE 641
>ref|XP_006601731.1| PREDICTED: uncharacterized protein LOC100305740 isoform X1 [Glycine
max]
Length = 852
Score = 185 bits (470), Expect = 6e-45
Identities = 95/186 (51%), Positives = 120/186 (64%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPNVVS+TTL+NGYC V + DA KVFDEM E V P
Sbjct: 343 LFFDMRNRGHCPNVVSFTTLINGYCSVRAMRDARKVFDEMLESGVEPNSVTYSVLIGGVL 402
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G+ L+ LWE M S V AAFAN++D+LC EG + EVF IAE +P G
Sbjct: 403 RERDLEGGRELMCRLWERMSVEVEDS--VKTAAFANLVDSLCREGFFGEVFRIAEELPFG 460
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
S+E ++ Q++DSLCR G+++GA+RI+Y+VRKR PS VSYN VIHGLS++G CMRA
Sbjct: 461 SCFSEEVSYGQMVDSLCRVGRYNGAARIVYLVRKRGFVPSDVSYNHVIHGLSRDGDCMRA 520
Query: 20 YQLFEE 3
YQL EE
Sbjct: 521 YQLLEE 526
Score = 61.2 bits (147), Expect = 2e-07
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Frame = -3
Query: 527 PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXXXXXXXXXXRGKR 351
P+VV++TT+++G V +AL +F + M E + P
Sbjct: 640 PDVVTFTTVISGMLDAARVDEALDLFHKVMPENGLRPSVVTY----------------NA 683
Query: 350 LVNELWEMMRSSDY---------SSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGK 198
L+ L+++ R SD +T ++ + V++ LCE E + ++
Sbjct: 684 LLRGLFKLKRVSDALMAFNNMVSEGITADSTTYTVVVEGLCESDQVEEAKSFWHNVIWPS 743
Query: 197 SVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAY 18
V D F ++ ++ LC +GK + A LY + ++P+ SYN +I+ G + AY
Sbjct: 744 GVHDNFVYAAILKGLCHSGKLNEACHFLYELVDSGISPNIFSYNILINCACNLGLKIEAY 803
Query: 17 QLFEE 3
Q+ E
Sbjct: 804 QIVRE 808
>gb|ESW06991.1| hypothetical protein PHAVU_010G093200g [Phaseolus vulgaris]
Length = 634
Score = 185 bits (470), Expect = 6e-45
Identities = 95/186 (51%), Positives = 118/186 (63%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +M RG+CPNVVS+TTL+ GYC V + DA KVFDEM E V P
Sbjct: 129 LFFDMKSRGHCPNVVSFTTLIKGYCLVRGIRDARKVFDEMLESGVEPNSVTYSVLIRGVL 188
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G+ L+ LWEMM S V AAFAN++D+LC EG + EVF IAE +P G
Sbjct: 189 RERDVEGGRELMCRLWEMMSVEAEDS--VKTAAFANLVDSLCREGFFGEVFRIAEELPFG 246
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
S+E A+ Q++DSLCR G+ +GA+RI Y++RKR PS VSYN VIHGLS++G CMRA
Sbjct: 247 SGFSEEVAYGQMVDSLCRVGRHNGAARIFYVMRKRGFVPSEVSYNYVIHGLSRDGDCMRA 306
Query: 20 YQLFEE 3
YQL EE
Sbjct: 307 YQLLEE 312
Score = 60.5 bits (145), Expect = 3e-07
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Frame = -3
Query: 527 PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXXXXXXXXXXRGKR 351
P+VV++TTL++G + +AL +F + M E + P
Sbjct: 426 PDVVTFTTLISGMLDAARINEALDLFHKLMPENGIKPSVVTY----------------NA 469
Query: 350 LVNELWEMMRSSDY---------SSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQGK 198
L+ L+++ R +D +T ++ + V++ LCE E ++
Sbjct: 470 LLRGLFKLKRPNDALMVLDDMVNDGITADSTTYTVVVEGLCESDQVEEAKRFWHNVIWPS 529
Query: 197 SVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRAY 18
V D F ++ ++ CR+G F A LY + ++P+ SYN +I+ G AY
Sbjct: 530 GVHDNFVYAAILKGFCRSGNFMEACHFLYELVDSGVSPNIFSYNILINCACNLGLKSEAY 589
Query: 17 QLFEE 3
Q+ E
Sbjct: 590 QIVRE 594
>ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [Amborella trichopoda]
gi|548831430|gb|ERM94238.1| hypothetical protein
AMTR_s00010p00213530 [Amborella trichopoda]
Length = 823
Score = 184 bits (468), Expect = 1e-44
Identities = 90/187 (48%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L +E+ G+CPN VSYT L+NG+C++GE+ A K+FDEM+ER + P
Sbjct: 179 LFMELERHGHCPNTVSYTALINGFCKIGEMDVAYKLFDEMKEREIRPNSLTYSVLLSGVL 238
Query: 380 XXXXXXR-GKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQ 204
G+ L+ LW+ M ++N AAFAN+++ALC EG + EV+ IAE MP
Sbjct: 239 QKGKLDEIGRELMGRLWKQMAIDVERDPSINTAAFANLVEALCREGFFSEVYNIAEEMPH 298
Query: 203 GKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMR 24
GK V+ +F+++Q+IDSL RA + HGASRI YI++KR L PS VSYN+++HGLS++G MR
Sbjct: 299 GKHVNADFSYTQMIDSLSRADQNHGASRITYIMKKRGLLPSFVSYNSIVHGLSKQGSIMR 358
Query: 23 AYQLFEE 3
AYQLFEE
Sbjct: 359 AYQLFEE 365
Score = 70.5 bits (171), Expect = 3e-10
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSV-VPXXXXXXXXXXXX 384
+LV M+ G P+VV+ T+++G+C G V +A+KV D+M + +V VP
Sbjct: 432 VLVSMLQSGCKPDVVTLNTVVHGFCEAGRVDEAMKVLDDMVKGNVCVPDVVTFTTVICGL 491
Query: 383 XXXXXXXRGKRL----------------------------VNELWEMMRSSDYSSLTVNN 288
L ++E ++ + +
Sbjct: 492 SDMGRTDEALELLQNMPKRGFEPTTVTYNAIFRGLCKFSKIDEAMQLFAKMMREKVQADG 551
Query: 287 AAFANVIDALCEEGLYHEVFAIAESMPQGKSVSDEFAFSQVIDSLCRAGKFHGASRILYI 108
FA +I LC G E E++ VSD+F ++ ++ +C+ GKF A LY
Sbjct: 552 TTFAILIAGLCNMGQIEEAKRFWEAVVWPSKVSDDFVYAAILKGMCKVGKFSEAINFLYE 611
Query: 107 VRKRSLNPSSVSYNAVIHGLSQEGGCMRAYQLFEE 3
+ ++P V+YN +I+ G AY+L E
Sbjct: 612 LVDSGVSPKLVAYNILINSACNLGLKREAYRLISE 646
>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328941|gb|EFH59360.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 689
Score = 177 bits (450), Expect = 1e-42
Identities = 86/186 (46%), Positives = 125/186 (67%)
Frame = -3
Query: 560 LLVEMVLRGYCPNVVSYTTLMNGYCRVGEVGDALKVFDEMRERSVVPXXXXXXXXXXXXX 381
L+ +M RG+ PNVV++TTL+ GYC + E+ A KVFDEMR + P
Sbjct: 184 LVFDMRNRGHLPNVVTFTTLIGGYCEIRELEVAHKVFDEMRGCGIRPNSLTMSVLIGGFF 243
Query: 380 XXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMPQG 201
G++L+ ELWE M+ D + ++ AAFAN++D++C EG ++++F IAE+MPQ
Sbjct: 244 KMRDVETGRKLMKELWEYMK--DEADTSMKTAAFANLVDSMCREGYFNDIFEIAENMPQC 301
Query: 200 KSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCMRA 21
+SV+ EF++ +IDSLCR + HGA+RI+YI++ + L P SYNA+IHGL ++GGCMRA
Sbjct: 302 ESVNVEFSYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRA 361
Query: 20 YQLFEE 3
YQL EE
Sbjct: 362 YQLLEE 367
Score = 56.6 bits (135), Expect = 4e-06
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Frame = -3
Query: 560 LLVEMVLRGYC-PNVVSYTTLMNGYCRVGEVGDALKVFDE-MRERSVVPXXXXXXXXXXX 387
+L +M+ +C P+ V+ TT+M G G +AL V + M E+ + P
Sbjct: 469 VLGDMMTGKFCAPDAVTLTTVMCGLLSQGRAEEALDVLNRVMPEKKIKPGVVTYNAVIRG 528
Query: 386 XXXXXXXXRGKRLVNELWEMMRSSDYSSLTVNNAAFANVIDALCEEGLYHEVFAIAESMP 207
+ ++L + +S+T ++ +A +ID LC + +
Sbjct: 529 LFKLNKGDEAMCVFDQL-------EKASVTADSTTYAIIIDGLCVTSQVDMAKKFWDDVI 581
Query: 206 QGKSVSDEFAFSQVIDSLCRAGKFHGASRILYIVRKRSLNPSSVSYNAVIHGLSQEGGCM 27
D F ++ + LCR+G A LY + P+ V YN VI S+ G
Sbjct: 582 WPSGRHDVFVYAAFLKGLCRSGYLSDACHFLYDLADSGAIPNVVCYNTVIDECSRSGLKR 641
Query: 26 RAYQLFEE 3
AYQ+ EE
Sbjct: 642 EAYQILEE 649