BLASTX nr result
ID: Rheum21_contig00017526
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00017526
(1378 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 415 e-113
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis] 402 e-109
ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [... 397 e-108
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 396 e-107
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu... 395 e-107
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 394 e-107
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t... 392 e-106
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 391 e-106
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i... 390 e-106
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [... 388 e-105
gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus... 386 e-104
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 383 e-104
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 383 e-103
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 381 e-103
ref|XP_002532622.1| Far upstream element-binding protein, putati... 380 e-103
ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Caps... 380 e-103
gb|EMJ19927.1| hypothetical protein PRUPE_ppa009068mg [Prunus pe... 380 e-103
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr... 379 e-102
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]... 379 e-102
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab... 379 e-102
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 415 bits (1067), Expect = e-113
Identities = 216/331 (65%), Positives = 256/331 (77%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVDLEDT----EKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S Y++SP + P T EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q++SGARIQLSRN EFFPGTSDRIIMISG ID+ LKA++LIL K L E+ +E+ DDV+ +
Sbjct: 61 QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
++VRL+VPNS C SFIEDSQAGIKISPQDN + GL DRLVT++G+L EQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LILSKL+EDPHYLQ MH FSY GI ++GFH PY Y + V T+ YN + Y +
Sbjct: 181 MRAIDLILSKLSEDPHYLQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG FQN+KEDR+NSVTIGVAD HIG+VLGRGG+NI EISQ SGARIKISD+GDFMSGT
Sbjct: 241 GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKVTITGSQRAIR AE MI QKVA ++R
Sbjct: 301 TDRKVTITGSQRAIRQAESMIMQKVAYATDR 331
>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
Length = 349
Score = 402 bits (1034), Expect = e-109
Identities = 212/346 (61%), Positives = 252/346 (72%), Gaps = 19/346 (5%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVD-------------------LEDTEKATCIKFLVSNAA 334
MES +S Y++SP P LE E+ IKFLVSNAA
Sbjct: 1 MESTESSYVSSPEAPRKRSPPPPKSPTAADINLKSTPALTDPLESMERPAYIKFLVSNAA 60
Query: 335 AGSVIGKGGATITDFQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKF 514
AGSVIGKGGATITDFQ++SGARIQLSRN EFFPGT+DRIIMISG I++ +KA++L+L K
Sbjct: 61 AGSVIGKGGATITDFQSKSGARIQLSRNHEFFPGTTDRIIMISGAINEIIKAMELVLAKL 120
Query: 515 LTEIQLENTDDVDVKSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIG 694
L+E+Q E +DVD + ++RLVVPN C SFIE+SQAGIKISPQDN Y+G
Sbjct: 121 LSELQTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKISPQDNNYLG 180
Query: 695 LTDRLVTVSGSLGEQMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAIL 874
+ DRLVT++G+L EQM AI+LILSKL EDPHY Q M+ FSYPG+ ++G H PYP+ +
Sbjct: 181 INDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYPGV-FSGIHGTPYPHVLP 239
Query: 875 PVGTSPYNPVHYGPSNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSG 1054
V T+ YN YGP+ GG FQNNKEDR+NSVTIGVAD HIG V+GRGG+NI EISQ SG
Sbjct: 240 SVATASYNQTGYGPNGAGGKFQNNKEDRSNSVTIGVADGHIGFVVGRGGRNIMEISQASG 299
Query: 1055 ARIKISDKGDFMSGTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
ARIKISD+GDF+SGT+DRKVTITGSQRAI AE MI QKVA SER
Sbjct: 300 ARIKISDRGDFLSGTTDRKVTITGSQRAICAAESMIMQKVAYASER 345
>ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [Fragaria vesca subsp.
vesca]
Length = 344
Score = 397 bits (1021), Expect = e-108
Identities = 210/341 (61%), Positives = 254/341 (74%), Gaps = 14/341 (4%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVD-----LEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP +P + TEK T ++FLVSNAAAGSVIGKGGATITD
Sbjct: 1 MESTESSYVSSPEAPRRRSSPPPPKSPASDTTEKPTYVRFLVSNAAAGSVIGKGGATITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIMISG I++ LKAV+L+L K L E+ E ++DV+
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMISGTINEILKAVELVLAKLLNELYSEESEDVEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
++++RL+VPNS C SFIE+SQAGIKISPQDN Y G+ DRLVT++G+L E
Sbjct: 121 RTKLRLIVPNSSCGGIIGKQGSTIKSFIEESQAGIKISPQDNNYFGVNDRLVTLTGTLDE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYG- 913
QM A +LILSKL+ED HY Q M+ FSYPG+ ++GFH PY Y + V T+ YN V YG
Sbjct: 181 QMRAADLILSKLSEDSHYTQSMNAPFSYPGVFFSGFHGIPYTYVLPSVSTAAYNAVSYGP 240
Query: 914 ------PSNDGGNFQNNKEDR--NNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKI 1069
P+ G FQNNKEDR NNSVTIGVAD HIG+V+GRGG+ I EISQ SGARIKI
Sbjct: 241 PPPNGPPNGAAGKFQNNKEDRNNNNSVTIGVADSHIGLVVGRGGRTIMEISQGSGARIKI 300
Query: 1070 SDKGDFMSGTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
SD+GDFMSGT+DRKVTITGSQR+I++AE MI QKV SER
Sbjct: 301 SDRGDFMSGTTDRKVTITGSQRSIQVAETMIMQKVNYASER 341
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 396 bits (1017), Expect = e-107
Identities = 213/337 (63%), Positives = 251/337 (74%), Gaps = 4/337 (1%)
Frame = +2
Query: 194 LPTVDLMESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGG 361
L + MESP+S Y++SP RS +P + EK+T I+FLVSNAAAGSVIGKGG
Sbjct: 43 LHQISFMESPESAYVSSPEVPPKRSSPPRSPTS-DFMEKSTYIRFLVSNAAAGSVIGKGG 101
Query: 362 ATITDFQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENT 541
+TI DFQ+QSGARIQLSRN EFFPGTSDRIIMISG ++ +KA++LIL K L+E+ E+
Sbjct: 102 STINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDG 161
Query: 542 DDVDVKSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVS 721
D+ D +S+VRL+VPNS C SFIEDSQA IKISPQDN Y+GLTDRLVT+
Sbjct: 162 DEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLM 221
Query: 722 GSLGEQMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNP 901
GSL EQM AI+LILSKLTEDPHY QFM+ FSY + YN
Sbjct: 222 GSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSY---------------------AAAYNS 260
Query: 902 VHYGPSNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKG 1081
++YGP+ GG FQNNKEDR+NSVTIGVAD+HIG+V+GRGG+NI +ISQ SGARIKISD+G
Sbjct: 261 MNYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRG 320
Query: 1082 DFMSGTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
DFMSGT+DRKVTITGSQRAIR AE MI QKVAS SER
Sbjct: 321 DFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 334
Score = 395 bits (1015), Expect = e-107
Identities = 209/331 (63%), Positives = 249/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S Y++SP RS A + EK T +FLVSNAAAGSVIGKGGATITDF
Sbjct: 1 MESTESSYVSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q+QSGARIQLSRN EFFPGTSDRIIM+SG ID LKAV+LI+ K L+EI E+ D+ + +
Sbjct: 61 QSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
RVRLVVPNS C SFIE+S AGIKISP D + GLTDRLVTV+G+L EQ
Sbjct: 121 MRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LILSKLT+DPHY Q MH FSY G+ ++GF Y + V T+ YN +++GP+
Sbjct: 181 MHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
FQ+NK+D NSVTIGVAD+HIG+V+GRGG+NI EISQTSGAR+KISD+GDFMSGT
Sbjct: 241 GAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRK+TITGSQRAIR AEDMI QKV+ SER
Sbjct: 301 TDRKITITGSQRAIRAAEDMIMQKVSYASER 331
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 394 bits (1013), Expect = e-107
Identities = 212/331 (64%), Positives = 249/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MESP+S Y++SP RS +P + EK+T I+FLVSNAAAGSVIGKGG+TI DF
Sbjct: 1 MESPESAYVSSPEVPPKRSSPPRSPTS-DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 59
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q+QSGARIQLSRN EFFPGTSDRIIMISG ++ +KA++LIL K L+E+ E+ D+ D +
Sbjct: 60 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPR 119
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
S+VRL+VPNS C SFIEDSQA IKISPQDN Y+GLTDRLVT+ GSL EQ
Sbjct: 120 SKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQ 179
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LILSKLTEDPHY QFM+ FSY + YN ++YGP+
Sbjct: 180 MRAIDLILSKLTEDPHYTQFMNAPFSY---------------------AAAYNSMNYGPN 218
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG FQNNKEDR+NSVTIGVAD+HIG+V+GRGG+NI +ISQ SGARIKISD+GDFMSGT
Sbjct: 219 GAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGT 278
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKVTITGSQRAIR AE MI QKVAS SER
Sbjct: 279 TDRKVTITGSQRAIRAAESMIMQKVASASER 309
>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 392 bits (1006), Expect = e-106
Identities = 201/332 (60%), Positives = 253/332 (76%), Gaps = 5/332 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN--RSVAEDAPVDL---EDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MESP+S Y++SP R A P D + EK T ++FLVSN+AAGSVIGKGG+TITD
Sbjct: 1 MESPESSYVSSPEGPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ L+AV+LIL+K L+E+ E+ +DV+
Sbjct: 61 FQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
K++VRL+VPN C SFIE+SQAGIKISPQDN Y G DR+VTV+G+L E
Sbjct: 121 KTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
QM I+LI+SKL EDPHY M + F+Y G +G+ PY Y + V YN V+Y P
Sbjct: 181 QMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRP 240
Query: 917 SNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSG 1096
+ G FQN+KEDR+NS+TIGVAD+HIG+V+GRGG+NI++ISQTSGA+IKISD+GD++SG
Sbjct: 241 NGTGAKFQNSKEDRSNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYISG 300
Query: 1097 TSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
T+DRKVTITGSQRAIR AE MI QKVA +ER
Sbjct: 301 TTDRKVTITGSQRAIRTAESMILQKVAYATER 332
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 391 bits (1004), Expect = e-106
Identities = 205/333 (61%), Positives = 254/333 (76%), Gaps = 6/333 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN--RSVAEDAPV---DLEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP R A P L+ EK T I+FLVSN+AAGSVIGKGG+TITD
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ +AV+LIL+K L+E+ E+ +D +
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
K++VRLVVPN C SFIEDSQAGIKISPQDN Y G DRLVT++GS E
Sbjct: 121 KTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
QM AIELI+SKL+EDPHY Q M++ FSYPG+ ++G+ PY Y + V YN V+Y P
Sbjct: 181 QMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240
Query: 917 SN-DGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMS 1093
+ GG QN+KE+R+NS+T+GVAD+HIG+V+GRGG+NI EISQ SGARIKISD+GD++S
Sbjct: 241 NGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVS 300
Query: 1094 GTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
GT+DRKVTITGSQRAIR AE MI QKVA +ER
Sbjct: 301 GTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
arietinum]
Length = 337
Score = 390 bits (1002), Expect = e-106
Identities = 198/334 (59%), Positives = 253/334 (75%), Gaps = 7/334 (2%)
Frame = +2
Query: 212 MESPDSPYITSPN-------RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATI 370
MES +S Y++SP S +P + EK T ++FLVSN+AAGSVIGKGG+TI
Sbjct: 1 MESTESSYVSSPEGPRKQRATSPPPKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 60
Query: 371 TDFQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDV 550
TDFQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ L+AV+LIL+K LTE+ E+ +DV
Sbjct: 61 TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDV 120
Query: 551 DVKSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSL 730
+ K++VRL+VPN C SFIEDSQAGIKISPQDN Y G DR+V+V+G+L
Sbjct: 121 EPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTL 180
Query: 731 GEQMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHY 910
EQM A++LI+SKL EDPHY Q M++ FSY G+ G+ PY Y + V YN V+Y
Sbjct: 181 DEQMRAVDLIVSKLAEDPHYSQSMNSPFSYSGVYVPGYQGVPYTYVLPSVAPPAYNSVNY 240
Query: 911 GPSNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFM 1090
P+ G FQN+KE+R+NS+TIG+AD+HIG+V+GRGG+NIA+I+Q SGA+IKISD+GD++
Sbjct: 241 RPNGAAGKFQNSKEERSNSMTIGIADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYI 300
Query: 1091 SGTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
SGT+DRKVTITGSQRAIR AE MI QKVA +ER
Sbjct: 301 SGTTDRKVTITGSQRAIRTAESMIMQKVAYATER 334
>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
Length = 337
Score = 388 bits (997), Expect = e-105
Identities = 202/333 (60%), Positives = 251/333 (75%), Gaps = 6/333 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDA-----PVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP A P L+ EK T I+FLVSN+AAGSVIGKGG+TITD
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ +AV+LIL+K L+E+ E+ +D +
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
K++VRLVVPN C SFIEDSQAGIKISPQDN Y G DRLV ++G+ E
Sbjct: 121 KTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
QM AIELI+SKL EDPHY Q M++ FSYPG+ ++G+ PY Y + V YN V+Y P
Sbjct: 181 QMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240
Query: 917 SND-GGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMS 1093
+ GG QN+KE+R+NS+T+GVAD+HIG+V+GRGG+NI EISQ SGARIKISD+GD++S
Sbjct: 241 NGTAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYIS 300
Query: 1094 GTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
GT+DRKVTITGSQRAIR AE MI QKVA +ER
Sbjct: 301 GTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
Length = 335
Score = 386 bits (991), Expect = e-104
Identities = 200/332 (60%), Positives = 252/332 (75%), Gaps = 5/332 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN--RSVAEDAPV---DLEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP R A P L+ EK T I+FLVSN+AAGSVIGKGG+TIT+
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITE 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ L AV LIL+K L+E+ E+ ++ +
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEILTAVGLILSKLLSELHTEDDNEAEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
K++VRL+VPN C SFIEDSQAGIKISPQDN Y G DRLVT++G+L E
Sbjct: 121 KTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGTLEE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
Q+ AIELI+SKL EDP Y Q M++ FSYPG+ ++G+ PY Y + V YN V+Y P
Sbjct: 181 QIRAIELIVSKLAEDPQYSQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240
Query: 917 SNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSG 1096
+ G FQN+KE+R+NS+T+GVAD+HIG+V+GRGG+NI EISQ SGARIKISD+GD++SG
Sbjct: 241 NGAGAKFQNSKEERSNSMTMGVADEHIGLVVGRGGRNIIEISQVSGARIKISDRGDYISG 300
Query: 1097 TSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
T+DRKVTITG+QRAIR AE MI QKVA +ER
Sbjct: 301 TTDRKVTITGAQRAIRTAESMILQKVAYATER 332
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 383 bits (984), Expect = e-104
Identities = 206/331 (62%), Positives = 243/331 (73%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVDLEDT----EKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S Y++SP + P T EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q++SGARIQLSRN EFFPGTSDRIIMISG ID+ LKA++LIL K L E+ +E+ DDV+ +
Sbjct: 61 QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
++VRL+VPNS C SFIEDSQAGIKISPQDN + GL DRLVT++G+L EQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LILSKL+EDPHYLQ MH FSY + YN + Y +
Sbjct: 181 MRAIDLILSKLSEDPHYLQAMHAPFSY--------------------AAATYNSMSYPSN 220
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG FQN+KEDR+NSVTIGVAD HIG+VLGRGG+NI EISQ SGARIKISD+GDFMSGT
Sbjct: 221 GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 280
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKVTITGSQRAIR AE MI QKVA ++R
Sbjct: 281 TDRKVTITGSQRAIRQAESMIMQKVAYATDR 311
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 383 bits (983), Expect = e-103
Identities = 206/331 (62%), Positives = 243/331 (73%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVDLEDT----EKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S Y++SP + P T EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESSYVSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q++SGARIQLSRN EFFPGTSDRIIMISG ID+ LKA++LIL K L E+ +E+ DDV+ +
Sbjct: 61 QSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
++VRL+VPNS C SFIEDSQAGIKISPQDN + GL DRLVT++G+L EQ
Sbjct: 121 TKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LILSKL+EDPHYLQ MH FSY + YN + Y +
Sbjct: 181 MRAIDLILSKLSEDPHYLQAMHAPFSY---------------------AATYNSMSYPSN 219
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG FQN+KEDR+NSVTIGVAD HIG+VLGRGG+NI EISQ SGARIKISD+GDFMSGT
Sbjct: 220 GAGGKFQNHKEDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGT 279
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKVTITGSQRAIR AE MI QKVA ++R
Sbjct: 280 TDRKVTITGSQRAIRQAESMIMQKVAYATDR 310
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 381 bits (979), Expect = e-103
Identities = 206/333 (61%), Positives = 251/333 (75%), Gaps = 6/333 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN--RSVAEDAPV---DLEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP R A P L+ EK T I+FLVSN+AAGSVIGKGG+TITD
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGT+DRIIM+SG I++ +AV+LIL+K L+E+ E+ +D +
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
K++VRLVVPN C SFIEDSQAGIKISPQDN Y G DRLVT++GS E
Sbjct: 121 KTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
QM AIELI+SKL+EDPHY Q M++ FSYPG Y G PY Y + V YN V+Y P
Sbjct: 181 QMRAIELIVSKLSEDPHYAQSMNSPFSYPG--YQGV---PYTYVLPSVAPPAYNAVNYRP 235
Query: 917 SN-DGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMS 1093
+ GG QN+KE+R+NS+T+GVAD+HIG+V+GRGG+NI EISQ SGARIKISD+GD++S
Sbjct: 236 NGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVS 295
Query: 1094 GTSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
GT+DRKVTITGSQRAIR AE MI QKVA +ER
Sbjct: 296 GTTDRKVTITGSQRAIRTAESMILQKVAYATER 328
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 380 bits (976), Expect = e-103
Identities = 205/332 (61%), Positives = 240/332 (72%), Gaps = 5/332 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVD-----LEDTEKATCIKFLVSNAAAGSVIGKGGATITD 376
MES +S Y++SP + +P + EK T ++FLVSNAAAGSVIGKGGATITD
Sbjct: 1 MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60
Query: 377 FQTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDV 556
FQ+QSGARIQLSRN EFFPGTSDRII+ISG +D LK V+L+L K L+E+ E+ DDVD
Sbjct: 61 FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDP 120
Query: 557 KSRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGE 736
+++VRLVVPNS C SFIE+SQAGIKISPQDN + GL DRLVTV+G+L E
Sbjct: 121 RTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEE 180
Query: 737 QMCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGP 916
QM AI+LILSKL +DPHY+Q MH FSY YN ++YG
Sbjct: 181 QMRAIDLILSKLYDDPHYVQTMHAPFSY---------------------AVAYNSMNYGA 219
Query: 917 SNDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSG 1096
+ GG FQNNKEDR NSVTIGVAD HIG+V+GRGG+NI EISQ SGARIKISD+GDFMSG
Sbjct: 220 NGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSG 279
Query: 1097 TSDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
T+DRK+ ITGSQRAIR AE MI QKVA SER
Sbjct: 280 TNDRKIIITGSQRAIRTAEGMIMQKVAYASER 311
>ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Capsella rubella]
gi|482556862|gb|EOA21054.1| hypothetical protein
CARUB_v10001394mg [Capsella rubella]
Length = 334
Score = 380 bits (975), Expect = e-103
Identities = 197/331 (59%), Positives = 251/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S SP RS + + EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESYAAGSPEELTKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q +SGARIQLSRNQEFFPGT+DRIIMISG+I + + ++LIL+K +E+ E+ ++V+ +
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
R+RLVVPNS C SFIE+S+AGIKISP DN Y GL+DRLVT+SG+ EQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LIL+KLTED HY Q +H+ +SY G+ Y+GFH PY Y + V T+ YN V+Y P+
Sbjct: 181 MRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYVLPSVATAGYNSVNYAPN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG +QN+KE+ +N+VTIGV+D+HIG+VLGRGG+NI EI+Q +GARIKISD+GDF+SGT
Sbjct: 241 GSGGKYQNHKEEPSNTVTIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFISGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
SDRKV+ITG QRAI+ AE MIKQKV S +ER
Sbjct: 301 SDRKVSITGPQRAIQQAETMIKQKVESATER 331
>gb|EMJ19927.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
Length = 307
Score = 380 bits (975), Expect = e-103
Identities = 196/304 (64%), Positives = 235/304 (77%), Gaps = 5/304 (1%)
Frame = +2
Query: 212 MESPDSPYITSPNRSVAEDAPVD---LEDT-EKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S Y++SP +P DT EK T ++FLVSNAAAGSVIGKGGATITDF
Sbjct: 1 MESTESSYVSSPEAPRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITDF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q+QSGARIQLSRN EFFPGT+DRIIM+SG+I++ LKAVDL+L K L+E+ E TDDV+ +
Sbjct: 61 QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAVDLVLAKLLSELYSEETDDVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
+++RLVVPNS C SFIE SQAGIKISPQDN Y GL DRLVTV+G+L EQ
Sbjct: 121 TKLRLVVPNSSCGGIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNLDEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M A++LI+SKL+EDPHY Q M+ FSYPG+ ++GFH PY Y + V T+ YN + YGP
Sbjct: 181 MRAVDLIVSKLSEDPHYTQSMNAPFSYPGVFFSGFHGIPYTYVLPSVATAAYNAMSYGPP 240
Query: 920 N-DGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSG 1096
N GG FQNNKEDR+NSVTIGVAD HIG+V+GRGG+ I EISQ SGARIKISD+GDFMSG
Sbjct: 241 NGTGGKFQNNKEDRSNSVTIGVADSHIGLVVGRGGRTIMEISQASGARIKISDRGDFMSG 300
Query: 1097 TSDR 1108
T+DR
Sbjct: 301 TTDR 304
>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099992|gb|ESQ40355.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 334
Score = 379 bits (973), Expect = e-102
Identities = 197/331 (59%), Positives = 249/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S SP RS + + EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESYAAASPEELTKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q +SGARIQLSRNQEFFPGT+DRIIMISG+I + + ++LIL+K +E+ E+ +DV+ +
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
R+RLVVPNS C SFIE+S+AGIKISP DN Y GL+DRLVT+SG+ EQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LIL+KLT D HY Q +H+ +SY G+ Y+GFH PY Y + V T+ YN V+Y P+
Sbjct: 181 MRAIDLILAKLTSDDHYSQNVHSPYSYAGLFYSGFHGHPYAYVLPSVATAGYNSVNYAPN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG +QN+KE+ + + TIGV+D+HIG+VLGRGG+NI EI+Q +GARIKISD+GDFMSGT
Sbjct: 241 GSGGKYQNHKEEASTTKTIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKV+ITGSQRAI+ AE MIKQKV S SER
Sbjct: 301 TDRKVSITGSQRAIQQAETMIKQKVDSASER 331
>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 334
Score = 379 bits (973), Expect = e-102
Identities = 197/331 (59%), Positives = 251/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S SP RS + + EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q +SGARIQLSRNQEFFPGT+DRIIMISG+I + + ++LIL+K +E+ E+ ++V+ +
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
R+RLVVPNS C SFIE+S+AGIKISP DN + GL+DRLVT+SG+ EQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LIL+KLTED HY Q +H+ +SY G+ Y+GFH PY YA+ V T+ YN V+Y P+
Sbjct: 181 MRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG +QN+KE+ + +VTIGVAD+HIG+VLGRGG+NI EI+Q +GARIKISD+GDFMSGT
Sbjct: 241 GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKV+ITG QRAI+ AE MIKQKV S +ER
Sbjct: 301 TDRKVSITGPQRAIQQAETMIKQKVDSATER 331
>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 379 bits (973), Expect = e-102
Identities = 196/331 (59%), Positives = 251/331 (75%), Gaps = 4/331 (1%)
Frame = +2
Query: 212 MESPDSPYITSPN----RSVAEDAPVDLEDTEKATCIKFLVSNAAAGSVIGKGGATITDF 379
MES +S SP RS + + EK T I+FLVSNAAAGSVIGKGG+TIT+F
Sbjct: 1 MESTESYAAASPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 380 QTQSGARIQLSRNQEFFPGTSDRIIMISGNIDQTLKAVDLILNKFLTEIQLENTDDVDVK 559
Q +SGARIQLSRNQEFFPGT+DRIIMISG+I + + ++LIL+K +E+ E+ ++V+ +
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPR 120
Query: 560 SRVRLVVPNSCCXXXXXXXXXXXXSFIEDSQAGIKISPQDNGYIGLTDRLVTVSGSLGEQ 739
R+RLVVPNS C SFIE+S+AGIKISP DN + GL+DRLVT+SG+ EQ
Sbjct: 121 RRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQ 180
Query: 740 MCAIELILSKLTEDPHYLQFMHTQFSYPGISYAGFHHGPYPYAILPVGTSPYNPVHYGPS 919
M AI+LIL+KLTED HY Q +H+ +SY G+ Y+GFH PY YA+ V T+ YN V+Y P+
Sbjct: 181 MRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPN 240
Query: 920 NDGGNFQNNKEDRNNSVTIGVADDHIGVVLGRGGKNIAEISQTSGARIKISDKGDFMSGT 1099
GG +QN+K++ + +VTIGVAD+HIG+VLGRGG+NI EI+Q +GARIKISD+GDFMSGT
Sbjct: 241 GSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGT 300
Query: 1100 SDRKVTITGSQRAIRIAEDMIKQKVASVSER 1192
+DRKV+ITG QRAI+ AE MIKQKV S +ER
Sbjct: 301 TDRKVSITGPQRAIQQAETMIKQKVDSATER 331