BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00017245
         (2175 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   993   0.0  
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi...   972   0.0  
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]     970   0.0  
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi...   965   0.0  
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   964   0.0  
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu...   962   0.0  
gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus pe...   957   0.0  
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr...   955   0.0  
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   954   0.0  
gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily p...   954   0.0  
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   951   0.0  
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr...   950   0.0  
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   950   0.0  
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi...   949   0.0  
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps...   944   0.0  
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   944   0.0  
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi...   942   0.0  
gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus...   937   0.0  
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...   937   0.0  
ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containi...   902   0.0  

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic [Vitis vinifera]
            gi|296087770|emb|CBI35026.3| unnamed protein product
            [Vitis vinifera]
          Length = 675

 Score =  993 bits (2568), Expect = 0.0
 Identities = 488/596 (81%), Positives = 551/596 (92%)
 Frame = +3

Query: 249  RRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQRS 428
            R+Q+  +LD S+DM+ LL S++QTSNEQEL++L+SPYK RQLS RFMVSLLSRE DWQRS
Sbjct: 79   RKQRVVHLDHSVDMDELLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDWQRS 138

Query: 429  LALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLIT 608
            LALLDW+++ A Y PSVFAYNV IRN+LRAKQWE+A GLF+EMR R L+PDRYTYS LIT
Sbjct: 139  LALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLIT 198

Query: 609  HFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITP 788
            HFGK G+FDSAL WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR+GI+P
Sbjct: 199  HFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISP 258

Query: 789  DLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVF 968
            DLVAYN+MINVFGKAKLF EAR+LL EMR  G  PDTVSYSTLL+MYVEN ++VEALSVF
Sbjct: 259  DLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVF 318

Query: 969  SEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEA 1148
            SEMNE+RC LDLTTCN+MIDVYGQLDM KEAD+LFWSMRKMG+EP +VSYNTLL+VYGEA
Sbjct: 319  SEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEA 378

Query: 1149 ELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITY 1328
            ELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RGIEPNAITY
Sbjct: 379  ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITY 438

Query: 1329 STIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQ 1508
            STIIS+W KAGK+DRAAMLFQKLRSS +EIDQVLYQTMIVAYERAGLVAH+KRLLHEL++
Sbjct: 439  STIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 498

Query: 1509 PDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEV 1688
            PDNIPR  AITILA AGRIEEATWVFRQAFDAG+VKDI+VFGC+IDL+SRNRK+TN+ EV
Sbjct: 499  PDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEV 558

Query: 1689 FEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGV 1868
            F+KM+GAGYFPDSNVIALVLNA GKLREF+KADA+Y+EM+EEGCVF D+VHFQMLSLYG 
Sbjct: 559  FDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGA 618

Query: 1869 RGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
            RGDF  V+SL ERLD+DPN+NKKELHLVV++IYERANRLNDA++++NRM E+GI K
Sbjct: 619  RGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMRERGISK 674


>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum lycopersicum]
          Length = 665

 Score =  972 bits (2513), Expect = 0.0
 Identities = 480/598 (80%), Positives = 543/598 (90%), Gaps = 1/598 (0%)
 Frame = +3

Query: 237  QPYRRR-QQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREI 413
            +PYRR  Q T++LD S+DM+ LL S+ QT+NE ELFAL+SPYK R LS RFMV+LLSRE 
Sbjct: 66   RPYRRNPQSTSFLDHSVDMDDLLSSIGQTANEHELFALMSPYKGRNLSMRFMVTLLSRES 125

Query: 414  DWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTY 593
            DWQRSLALLDW+++VALY PSVFAYNV +RN+LRAKQW++A GLFDEMR R LSPDRYTY
Sbjct: 126  DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 185

Query: 594  SMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 773
            S LIT+FGK GLFD AL WLQKMEQD VSGDLVLY NLIELSRKLCDY+KAISIFSRLK 
Sbjct: 186  STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKT 245

Query: 774  AGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVE 953
            +GITPDLVAYNTMINVFGKAKLF EA++L++EMR  G  PDTVSYSTLL MYVENQ+F+E
Sbjct: 246  SGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLE 305

Query: 954  ALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLK 1133
            ALSVFSEMNE++C LDLTTCNIMIDVYGQLDM KEAD+LFWSMRKMG+EPNVVSYNTLL+
Sbjct: 306  ALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLR 365

Query: 1134 VYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEP 1313
            VYGEAELFGEAIHLFRLMQ KNI+QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ  GIEP
Sbjct: 366  VYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEP 425

Query: 1314 NAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLL 1493
            NAITYSTIIS+WAK GK+DRAAMLFQKLRSS VEIDQVLYQTMIVAYERAGLVAH+KRLL
Sbjct: 426  NAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL 485

Query: 1494 HELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYT 1673
            HEL++PDNIPR  AITILA +GRIEEATWVFRQAFDAG++KDI+VF C+I+LYSRNRKYT
Sbjct: 486  HELKRPDNIPRETAITILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYT 545

Query: 1674 NLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQML 1853
            NL EVFEKM GAGYFP+SNVIALVLNAYGKL+EF+KAD +Y+EM EEGCVF D+VHFQML
Sbjct: 546  NLIEVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQML 605

Query: 1854 SLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKG 2027
            SLYG R +++ VE+L + LD+DPN+NKKELHLVV+ IYE+ANR+NDA+R+INRM  +G
Sbjct: 606  SLYGARRNYEMVETLYKVLDSDPNVNKKELHLVVAAIYEKANRMNDASRIINRMTYRG 663


>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
          Length = 688

 Score =  970 bits (2507), Expect = 0.0
 Identities = 476/597 (79%), Positives = 544/597 (91%)
 Frame = +3

Query: 246  RRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQR 425
            R  ++  YLD S+DM+ LL+S+ QT NEQELF++LSPYK RQLS +FMV +LSRE DWQR
Sbjct: 89   RHPREPAYLDHSVDMDELLRSIWQTQNEQELFSVLSPYKGRQLSIKFMVLVLSRETDWQR 148

Query: 426  SLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLI 605
            SLA+LDW+++ ALY PSVFAYNV +RN+LRAKQW+VA GLFDEMR R L+PDRYTYS LI
Sbjct: 149  SLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLI 208

Query: 606  THFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIT 785
            T+FGK G+FD+AL WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLK +GIT
Sbjct: 209  TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGIT 268

Query: 786  PDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSV 965
            PDLVAYN+MINVFGKAKLF EAR+L+ EMR  G  PDTVSYSTLL MYVENQ+F+EALSV
Sbjct: 269  PDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSV 328

Query: 966  FSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGE 1145
            FSEMNE+RC LDLTTCNIMIDVYGQLDM KEAD+LFWSMRKMG+EPNVVSYNTLL+VYGE
Sbjct: 329  FSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGE 388

Query: 1146 AELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAIT 1325
            AELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RGIEPNAIT
Sbjct: 389  AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAIT 448

Query: 1326 YSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR 1505
            YSTIIS+W KAGK+DRAA+LFQKLRSS VEIDQVLYQTMIVAYE+AGLVAH+KRLLHEL+
Sbjct: 449  YSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELK 508

Query: 1506 QPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAE 1685
            +PDNIPR  AITILA AGR+EEATWVFRQA DAG++KDISVF C+I+L+S+N+KY NL E
Sbjct: 509  RPDNIPRETAITILAGAGRLEEATWVFRQASDAGEIKDISVFSCMIELFSKNKKYANLTE 568

Query: 1686 VFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYG 1865
            VF+KM+G GYFPDSNVIALVLNAYGKLR+F+KADA+Y+EMQEEGCVF D+VHFQM+SLYG
Sbjct: 569  VFDKMRGVGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQEEGCVFSDEVHFQMISLYG 628

Query: 1866 VRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
             R DF  VE L ERL++DPN+N KELHLVV+ IYERAN+LNDA+R++NRMN++GI+K
Sbjct: 629  ARKDFKMVEELFERLESDPNIN-KELHLVVAGIYERANKLNDASRIMNRMNDRGILK 684


>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Solanum tuberosum]
          Length = 668

 Score =  965 bits (2495), Expect = 0.0
 Identities = 474/598 (79%), Positives = 541/598 (90%), Gaps = 1/598 (0%)
 Frame = +3

Query: 237  QPYRRRQQT-TYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREI 413
            +PYRR  Q+ ++LD S+DM+ LL S+ QT+NE ELFAL+SPYK R LS RFMV+LLSRE 
Sbjct: 69   RPYRRNPQSNSFLDHSVDMDDLLSSIGQTTNEHELFALMSPYKGRNLSMRFMVTLLSRES 128

Query: 414  DWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTY 593
            DWQRSLALLDW+++VALY PSVFAYNV +RN+LRAKQW++A GLFDEMR R LSPDRYTY
Sbjct: 129  DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 188

Query: 594  SMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 773
            S LIT+FGK GLFD AL WLQKMEQD VSGDLVLY NLIELSRKLCDY+KAISIFSRLK 
Sbjct: 189  STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKT 248

Query: 774  AGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVE 953
            +GITPDLVAYNTMINVFGKAKLF EA++L++EMR  G  PDTVSYSTLL MYVENQ+F+E
Sbjct: 249  SGITPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLE 308

Query: 954  ALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLK 1133
            ALSVFSEMNE++C LDLTTCNIMIDVYGQLDM KEAD+LFWSMRKMG+EPNVVSYNTLL+
Sbjct: 309  ALSVFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLR 368

Query: 1134 VYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEP 1313
            VYGEAELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGK+LEHEKA NL+QEMQ  GIEP
Sbjct: 369  VYGEAELFGEAIHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEP 428

Query: 1314 NAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLL 1493
            NAITYSTIIS+W K GK+DRAAMLFQKLRSS VEIDQVLYQTMIVAYERAGLVAH+KRLL
Sbjct: 429  NAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL 488

Query: 1494 HELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYT 1673
            HEL++PDNIPR  AI ILA +GRIEEATWVFRQAFDAG++KDI+VF C+I+LYSRNRKYT
Sbjct: 489  HELKRPDNIPRETAIMILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYT 548

Query: 1674 NLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQML 1853
            NL EVFEKM+G GYFP+SNVIALVLNAYGKL+EF+KAD +Y+EM EEGCVF D+VHFQML
Sbjct: 549  NLIEVFEKMRGTGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQML 608

Query: 1854 SLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKG 2027
            SLYG R +++ VE+L + LD+DPN+NKKELHLVV+ IYE+ANR+NDA+R++NRM  +G
Sbjct: 609  SLYGARRNYEMVETLYKMLDSDPNVNKKELHLVVAGIYEKANRVNDASRIVNRMTYRG 666


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  964 bits (2491), Expect = 0.0
 Identities = 480/600 (80%), Positives = 546/600 (91%), Gaps = 2/600 (0%)
 Frame = +3

Query: 243  YRRRQQTT--YLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREID 416
            + R Q+TT  YLD S+DM+ LL S++QT NE EL++LLSPYK+RQLS RFMVSL+S+E D
Sbjct: 54   WTRTQKTTPSYLDHSVDMKQLLISISQTQNEVELYSLLSPYKERQLSIRFMVSLISQEAD 113

Query: 417  WQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYS 596
            WQRSLALLDW+++VA Y PSVFAYNV +RN+LRAK+W++A GLFDEMR R LSPDRYTYS
Sbjct: 114  WQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYS 173

Query: 597  MLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRA 776
             LIT FGKAG+FD +L WLQ+MEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF RLKR+
Sbjct: 174  TLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRS 233

Query: 777  GITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEA 956
            GITPDLVAYN+MINVFGKA+LF EARML+ EMR  G  PDTVSYSTLL++YVEN++FVEA
Sbjct: 234  GITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEA 293

Query: 957  LSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKV 1136
            LSVF+EMNE  C LDL TCNIMIDVYGQLDMVKEAD+LFWSMRKMG+EPNVVSYNTLLKV
Sbjct: 294  LSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKV 353

Query: 1137 YGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPN 1316
            YGEAELFGEAIHLFRLMQ K I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RGIEPN
Sbjct: 354  YGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPN 413

Query: 1317 AITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLH 1496
            AITYSTIIS+W KAGK+DRAAMLFQKLRSS VEIDQVLYQTMIVAYERAGLVAH+KRLLH
Sbjct: 414  AITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLH 473

Query: 1497 ELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTN 1676
            +L+ PD IPR  AI ILARAGRIEEATWVFRQAFDAG+VKDISVF C+I+L+SRN++  N
Sbjct: 474  DLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPAN 533

Query: 1677 LAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLS 1856
            + EVFEKM+GAGYFPDS+VIALVLNAYGKLREF+KADA+YREMQEE CVFPD+VHFQMLS
Sbjct: 534  VVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLS 593

Query: 1857 LYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
            LYG R DF  VESL E+LD+DPN+NKKELHLVV++IYER NRLNDA+R++NRM+++G+++
Sbjct: 594  LYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSKEGMLR 653


>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
            gi|550320029|gb|EEF04162.2| hypothetical protein
            POPTR_0017s11210g [Populus trichocarpa]
          Length = 639

 Score =  962 bits (2488), Expect = 0.0
 Identities = 473/597 (79%), Positives = 544/597 (91%)
 Frame = +3

Query: 246  RRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQR 425
            RRR ++  L   +DM  LL S++QT NE +L++LLSPYKDRQLS RFMVS++SRE DWQR
Sbjct: 43   RRRARSLLL---VDMTELLLSISQTQNELQLYSLLSPYKDRQLSIRFMVSVISRESDWQR 99

Query: 426  SLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLI 605
            SLALLDW++D+A Y PSVFAYNV +RN+LRAKQW+ A GLFDEMR+R L+PDRYTYS LI
Sbjct: 100  SLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLI 159

Query: 606  THFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIT 785
            THFGKAG+FD++L WLQ+MEQDRVSGDLVLYSNLIELSRKLCDYSKAISIF RLKR+GI 
Sbjct: 160  THFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIM 219

Query: 786  PDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSV 965
            PDLVAYN+MINVFGKAKLF EA++L++EMR  G  PDTVSYSTLL++YVEN++FVEALSV
Sbjct: 220  PDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSV 279

Query: 966  FSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGE 1145
            F+EMNE +C LDLTTCN+MIDVYGQLDM KEAD+LFWSMRKMG+EPNVVSYNTLL+VYGE
Sbjct: 280  FAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGE 339

Query: 1146 AELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAIT 1325
             ELFGEAIHLFRLMQ K+I+QNVVTYNTMIK+YGKSLEHEKA NL+QEMQ RGIEPNAIT
Sbjct: 340  TELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAIT 399

Query: 1326 YSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR 1505
            YSTIIS+W KAGK+DRAAMLFQKLRSS VEIDQVLYQTMIVAYER+GLVAH+KRLLHEL+
Sbjct: 400  YSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELK 459

Query: 1506 QPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAE 1685
             PD+IPR  AI ILARAGRIEEATWVFRQAFDAG+VKDISVFGC++DL+SRNRK  N+ E
Sbjct: 460  HPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIE 519

Query: 1686 VFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYG 1865
            VFEKM+GAGYFPDSNVIALVLNAYGKL EF+KADALY+EMQEE CVFPD+VHFQMLSLYG
Sbjct: 520  VFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQEEECVFPDEVHFQMLSLYG 579

Query: 1866 VRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
             R DF  +E+L ERLD+DPN+NKKELHLVV++IYER NRLNDA+R++NRM++ G+++
Sbjct: 580  ARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRLNDASRIMNRMSKGGVLR 636


>gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
          Length = 584

 Score =  957 bits (2474), Expect = 0.0
 Identities = 475/583 (81%), Positives = 531/583 (91%)
 Frame = +3

Query: 288  MEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQRSLALLDWMHDVALY 467
            M+ LL S+ QT NEQEL++L+S YK RQLS RFMVSLLSRE DWQRSLA+LDW+++ ALY
Sbjct: 1    MDELLSSIGQTQNEQELYSLMSTYKGRQLSIRFMVSLLSREPDWQRSLAILDWINEEALY 60

Query: 468  RPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLITHFGKAGLFDSALG 647
             PSVFAYNV IRN+LRAKQWE+A GLF+EMR R L+PDRYTYS LIT FGKAG+FDSAL 
Sbjct: 61   TPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSALS 120

Query: 648  WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNTMINVFG 827
            WLQKMEQD VSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR GI PDLVAYN+MINVFG
Sbjct: 121  WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYNSMINVFG 180

Query: 828  KAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVFSEMNELRCGLDLT 1007
            KAKLF EAR+LL+EMR  G  PDTVSYSTLL+MY+ENQ+FVEALSVFSEMNE++C LDLT
Sbjct: 181  KAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLT 240

Query: 1008 TCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEAELFGEAIHLFRLM 1187
            TCNIMIDVYGQLDM KEAD+LFWSMRKMG+EPNVVSYNTLL+VYG+AELFGEAIHLFRLM
Sbjct: 241  TCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 300

Query: 1188 QCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAGKM 1367
            Q  +I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ  GI+PNA+TYSTIIS+W KAGK+
Sbjct: 301  QRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKL 360

Query: 1368 DRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQPDNIPRGAAITIL 1547
            DRAAMLFQKLRSS VEIDQVLYQTMIVAYER GLVAH+KRLLHEL++PDNIPR  AITIL
Sbjct: 361  DRAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITIL 420

Query: 1548 ARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVFEKMQGAGYFPDS 1727
            A AGRIEEATWVFRQAFDAG+VKDISVFGC+IDL+SRNRKY N  EVFEKM+ AGYFP S
Sbjct: 421  AGAGRIEEATWVFRQAFDAGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRVAGYFPAS 480

Query: 1728 NVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGVRGDFDAVESLLER 1907
            NVI LVLNA+GKLREF+KADALYREMQEEGCVF D+VHFQML+LYG R DF  VE+L +R
Sbjct: 481  NVIDLVLNAFGKLREFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKR 540

Query: 1908 LDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
            L  DPN+NKKELHLVV++IYER+NRLNDA+R++N+MNE+GI+K
Sbjct: 541  LMCDPNINKKELHLVVASIYERSNRLNDASRIMNKMNERGILK 583


>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
            gi|557106704|gb|ESQ47019.1| hypothetical protein
            EUTSA_v10028245mg [Eutrema salsugineum]
          Length = 683

 Score =  955 bits (2468), Expect = 0.0
 Identities = 465/599 (77%), Positives = 541/599 (90%)
 Frame = +3

Query: 243  YRRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQ 422
            +RR Q++++LD  +DM+ LL S+ QT NEQELF+LLS YKDRQLS RFMVSLLSRE DWQ
Sbjct: 82   HRRYQRSSFLDHKVDMDDLLASIHQTQNEQELFSLLSSYKDRQLSIRFMVSLLSREKDWQ 141

Query: 423  RSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSML 602
            RSLALLDW+H+ A Y PSVFAYNV +RN+LRAKQ+++A GLFDEMR R L+PDRYTYS L
Sbjct: 142  RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 201

Query: 603  ITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGI 782
            IT FGK G+FDSAL WLQKMEQDRVSGDLVLYSNLIELSR+LCDYSKAISIFSRLK++GI
Sbjct: 202  ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGI 261

Query: 783  TPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALS 962
            TPDLVAYN+MINV+GKAKLF EAR+L++EM+  G  P+TVSYSTLL++YVENQ+F+EALS
Sbjct: 262  TPDLVAYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALS 321

Query: 963  VFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYG 1142
            VF+EM E+ C LDLTTCN+MIDVYGQLDMVKEAD+LFWSMRKM +EPNVVSYNT+L+VYG
Sbjct: 322  VFAEMKEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYG 381

Query: 1143 EAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAI 1322
            EA+L GEAIHLFRLMQ K+I+QNVVTYNTMIK+YGK+LEHEKA NL+QEMQ RGIEPNAI
Sbjct: 382  EADLIGEAIHLFRLMQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAI 441

Query: 1323 TYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHEL 1502
            TYSTIIS+W KAGK+DRAA LFQKLR S VEIDQVLYQTMIVAYER GL+ H+KRLL EL
Sbjct: 442  TYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQEL 501

Query: 1503 RQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLA 1682
            +QPDNIPR  AITILA+AGRIEEATWVFRQAF++G+VKDI+VFGC+I LYSRN++Y N+ 
Sbjct: 502  KQPDNIPRETAITILAKAGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVI 561

Query: 1683 EVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLY 1862
            EVFEKM+ AGYFPDSN IA+VLNAYGK REF+KAD +YREMQEEGCVFPD+VHFQMLSLY
Sbjct: 562  EVFEKMRSAGYFPDSNAIAIVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 621

Query: 1863 GVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP 2039
              + DF+ VESL ERL++DPN+N KELHLVV+ +YERA+RLNDA+RV+NRM E+GI+KP
Sbjct: 622  SSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADRLNDASRVMNRMRERGILKP 680


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g39980, chloroplastic; Flags: Precursor
            gi|10176990|dbj|BAB10222.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 678

 Score =  954 bits (2467), Expect = 0.0
 Identities = 466/599 (77%), Positives = 542/599 (90%)
 Frame = +3

Query: 243  YRRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQ 422
            +RR Q++ +LD ++DM+ LL S+ QT NE+ELF+LLS YKDRQLS RFMVSLLSRE DWQ
Sbjct: 77   HRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQ 136

Query: 423  RSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSML 602
            RSLALLDW+H+ A Y PSVFAYNV +RN+LRAKQ+++A GLFDEMR R L+PDRYTYS L
Sbjct: 137  RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 196

Query: 603  ITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGI 782
            IT FGK G+FDSAL WLQKMEQDRVSGDLVLYSNLIELSR+LCDYSKAISIFSRLKR+GI
Sbjct: 197  ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 256

Query: 783  TPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALS 962
            TPDLVAYN+MINV+GKAKLF EAR+L++EM   G  P+TVSYSTLL++YVEN +F+EALS
Sbjct: 257  TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316

Query: 963  VFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYG 1142
            VF+EM E+ C LDLTTCNIMIDVYGQLDMVKEAD+LFWS+RKM +EPNVVSYNT+L+VYG
Sbjct: 317  VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376

Query: 1143 EAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAI 1322
            EAELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGK++EHEKA NL+QEMQ RGIEPNAI
Sbjct: 377  EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436

Query: 1323 TYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHEL 1502
            TYSTIIS+W KAGK+DRAA LFQKLRSS VEIDQVLYQTMIVAYER GL+ H+KRLLHEL
Sbjct: 437  TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496

Query: 1503 RQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLA 1682
            + PDNIPR  AITILA+AGR EEATWVFRQAF++G+VKDISVFGC+I+LYSRN++Y N+ 
Sbjct: 497  KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 556

Query: 1683 EVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLY 1862
            EVFEKM+ AGYFPDSNVIA+VLNAYGK REF+KAD +YREMQEEGCVFPD+VHFQMLSLY
Sbjct: 557  EVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 616

Query: 1863 GVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP 2039
              + DF+ VESL +RL++DPN+N KELHLVV+ +YERA++LNDA+RV+NRM E+GI+KP
Sbjct: 617  SSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675


>gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 672

 Score =  954 bits (2466), Expect = 0.0
 Identities = 473/604 (78%), Positives = 541/604 (89%), Gaps = 3/604 (0%)
 Frame = +3

Query: 234  TQPYRR---RQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLS 404
            T P+ R    Q +T+LD SIDME L  S+++T N ++LF LLSPYK RQLS RFMVSLLS
Sbjct: 68   TAPFYRPKPSQNSTFLDHSIDMEELFASISKTQNGKDLFTLLSPYKTRQLSIRFMVSLLS 127

Query: 405  REIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDR 584
            RE DWQRSLALLDW+++ A Y PS+FAYNV IRN+++AKQW +A GLF+EMR + L+PDR
Sbjct: 128  RETDWQRSLALLDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDR 187

Query: 585  YTYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSR 764
            +TYS LIT+FGK G+FDSAL WLQKME D VSGDLVL+SNLIELSRKL DYSKAISIF++
Sbjct: 188  FTYSTLITYFGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNK 247

Query: 765  LKRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQR 944
            LKR+GI PDLV YN+MINVFGKAKLF EAR+L++EMR  G  PDTVSYST+LNMYVEN +
Sbjct: 248  LKRSGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHK 307

Query: 945  FVEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNT 1124
            FVEALSVF+EMNE++C LDLTTCNIMIDVYGQLDM KEAD+LFW MRKMG+EPNVVSYNT
Sbjct: 308  FVEALSVFAEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNT 367

Query: 1125 LLKVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRG 1304
            LLKVYGEAEL+GEAIHLFRLM  K+I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RG
Sbjct: 368  LLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRG 427

Query: 1305 IEPNAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSK 1484
            IEPNAITYSTIIS+W KAGK+DRAAMLFQKLRSS VEIDQVLYQTMIVAYERAGLVAH+K
Sbjct: 428  IEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAK 487

Query: 1485 RLLHELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNR 1664
            RLLHEL+QPDN+PR  AI ILARAGRIEEATWVFRQA DAG+VKDISVFG +IDL+SRN+
Sbjct: 488  RLLHELKQPDNLPRDTAIMILARAGRIEEATWVFRQACDAGEVKDISVFGLMIDLFSRNK 547

Query: 1665 KYTNLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHF 1844
            K+ N+ EVFEKM+ AGYFPDSNVIALVLNAYGKLREFDKADA+Y+EMQEEGCVFPD+VHF
Sbjct: 548  KHANVIEVFEKMRSAGYFPDSNVIALVLNAYGKLREFDKADAVYKEMQEEGCVFPDEVHF 607

Query: 1845 QMLSLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEK 2024
            QMLSL G R DF  VESL E+LD+DPN+NKKELHLVV++IYER NRLNDA++++NRM+E+
Sbjct: 608  QMLSLCGARKDFKMVESLFEKLDSDPNINKKELHLVVASIYERGNRLNDASQIMNRMSER 667

Query: 2025 GIVK 2036
            GI+K
Sbjct: 668  GILK 671



 Score =  182 bits (463), Expect = 4e-43
 Identities = 131/484 (27%), Positives = 235/484 (48%), Gaps = 4/484 (0%)
 Frame = +3

Query: 642  LGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNTMINV 821
            L W+   E+ R S  L  Y+ +I    K   ++ A  +F  ++  G+TPD   Y+T+I  
Sbjct: 139  LDWVN--EEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITY 196

Query: 822  FGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVFSEMNELRCGLD 1001
            FGK  +F  A   L++M  +G + D V +S L+ +  + + + +A+S+F+++       D
Sbjct: 197  FGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPD 256

Query: 1002 LTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEAELFGEAIHLFR 1181
            L   N MI+V+G+  + +EA  L   MR +GV P+ VSY+T+L +Y E   F EA+ +F 
Sbjct: 257  LVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFA 316

Query: 1182 LMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAG 1361
             M       ++ T N MI +YG+    ++A  L   M+  GIEPN ++Y+T++ V+ +A 
Sbjct: 317  EMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAE 376

Query: 1362 KMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR----QPDNIPRG 1529
                A  LF+ +    +E + V Y TMI  Y ++     +  L+ E++    +P+ I   
Sbjct: 377  LYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYS 436

Query: 1530 AAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVFEKMQGA 1709
              I+I  +AG+++ A  +F++   +G   D  ++  +I  Y R     +   +  +++  
Sbjct: 437  TIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQP 496

Query: 1710 GYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGVRGDFDAV 1889
               P    I ++  A G++ E   A  ++R+  + G V    V   M+ L+        V
Sbjct: 497  DNLPRDTAIMILARA-GRIEE---ATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHANV 552

Query: 1890 ESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP*SA*TVHVQS 2069
              + E++ +        +  +V N Y +    + A  V   M E+G V P     VH Q 
Sbjct: 553  IEVFEKMRSAGYFPDSNVIALVLNAYGKLREFDKADAVYKEMQEEGCVFPDE---VHFQM 609

Query: 2070 VVYC 2081
            +  C
Sbjct: 610  LSLC 613


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297316573|gb|EFH46996.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 680

 Score =  951 bits (2457), Expect = 0.0
 Identities = 465/599 (77%), Positives = 540/599 (90%)
 Frame = +3

Query: 243  YRRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQ 422
            +RR Q++ +LD ++DM+ LL S+ QT NE+ELF+LLS YKDRQLS RFMVSLLSRE DWQ
Sbjct: 79   HRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQ 138

Query: 423  RSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSML 602
            RSLALLDW+H+ A Y PSVFAYNV +RN+LRAKQ+ +A GLFDEMR R L+PDRYTYS L
Sbjct: 139  RSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTL 198

Query: 603  ITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGI 782
            IT FGK G+FDSAL WLQKMEQDRVSGDLVLYSNLIELSR+LCDYSKAISIFSRLKR+GI
Sbjct: 199  ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGI 258

Query: 783  TPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALS 962
            TPDLVAYN+MINV+GKAKLF EAR+L++EM   G +P+TVSYSTLL++YVEN +F+EALS
Sbjct: 259  TPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALS 318

Query: 963  VFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYG 1142
            VF+EM E+ C LDLTTCNIMIDVYGQLDMVKEAD+LFWS+RKM +EPNVVSYNT+L+VYG
Sbjct: 319  VFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 378

Query: 1143 EAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAI 1322
            EAELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGK++EHEKA NL+QEMQ RGIEPNAI
Sbjct: 379  EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 438

Query: 1323 TYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHEL 1502
            TYSTIIS+W KAGK+DRAA LFQKLRSS VEIDQVLYQTMIVAYER GL+ H+KRLLHEL
Sbjct: 439  TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 498

Query: 1503 RQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLA 1682
            + PDNIPR  AITILA+AG  EEATWVFRQAF++G+VKDISVFGC+I+LYSRN++Y N+ 
Sbjct: 499  KLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 558

Query: 1683 EVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLY 1862
            EVFEKM+ AGYFPDSN IA+VLNAYGK REF+KAD +YREMQEEGCVFPD+VHFQMLSLY
Sbjct: 559  EVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 618

Query: 1863 GVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP 2039
              + DF+ VESL ERL++DPN+N KELHLVV+ +YERA++LNDA+RV+NRM E+GI+KP
Sbjct: 619  SSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 677


>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
            gi|557533112|gb|ESR44295.1| hypothetical protein
            CICLE_v10011224mg [Citrus clementina]
          Length = 677

 Score =  950 bits (2456), Expect = 0.0
 Identities = 471/599 (78%), Positives = 536/599 (89%), Gaps = 2/599 (0%)
 Frame = +3

Query: 234  TQPYRR--RQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSR 407
            T+ YR   ++   +LD S+DM  LLKS+++T NE ELFALLSPYKDRQLS RFMVSLL+R
Sbjct: 71   TKYYRHPNKKVPVHLDHSVDMNELLKSISETQNEHELFALLSPYKDRQLSIRFMVSLLTR 130

Query: 408  EIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRY 587
            E ++QRS+A+LDW+++ A Y PSVFAYNV +RN+LRAKQWE+A GLFDEMR R ++PDRY
Sbjct: 131  EQNYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRY 190

Query: 588  TYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 767
            TYS LIT FGK G+FDSA+ WLQ+MEQDRVSGDLVLYSNLIEL+RKL DYSKAISIFSRL
Sbjct: 191  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 250

Query: 768  KRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRF 947
            K +GI PDLVAYNTMINVFGKAKLF EAR+L+EEMR  G  PDTVSYSTLLN+YVEN +F
Sbjct: 251  KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 310

Query: 948  VEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTL 1127
            VEALSVF+EMNE+ C LDLTTCNIMIDVYGQLDM K+AD+LFWSMRKMG++P+VVSYNTL
Sbjct: 311  VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 370

Query: 1128 LKVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGI 1307
            L+VYGEAELFGEAIHLFRLMQ K I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RGI
Sbjct: 371  LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 430

Query: 1308 EPNAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKR 1487
            EPNAITYSTII++W KAGK+DRAAMLFQKLRSS VEID VLYQTMIVAYER GLVAH+KR
Sbjct: 431  EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 490

Query: 1488 LLHELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRK 1667
            LLHELRQPD IPR  AITILARAGRIEEATWVFRQAFDAG+VKDISVFGC+I+L+SRN+K
Sbjct: 491  LLHELRQPDTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 550

Query: 1668 YTNLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQ 1847
            Y N+ EVFEKM+ AGYFPDS++IALVLN+YGKLREF+ AD LY EMQEEGCVF D VHFQ
Sbjct: 551  YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 610

Query: 1848 MLSLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEK 2024
            MLSLYG R DF+ +ESL ERLD+D N+NKKELH VV+ IYERANRLNDA+R++NRMN++
Sbjct: 611  MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 669



 Score =  102 bits (253), Expect = 9e-19
 Identities = 74/334 (22%), Positives = 146/334 (43%)
 Frame = +3

Query: 408  EIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRY 587
            ++D  +    L W        PSV +YN  +R    A+ +  A  LF  M+ + +  +  
Sbjct: 341  QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 400

Query: 588  TYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 767
            TY+ +I  +GK+   + A   +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 401  TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 460

Query: 768  KRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRF 947
            + +G+  D V Y TMI  + +  L   A+ LL E+R     PDT+   T + +     R 
Sbjct: 461  RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPDTIPRETAITILARAGRI 516

Query: 948  VEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTL 1127
             EA  VF +  +     D++    MI+++ +        ++F  MR  G  P+      +
Sbjct: 517  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 576

Query: 1128 LKVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGI 1307
            L  YG+   F  A  L+  MQ +    +   +  M+ +YG   +     +L + +     
Sbjct: 577  LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 636

Query: 1308 EPNAITYSTIISVWAKAGKMDRAAMLFQKLRSSR 1409
                  +  +  ++ +A +++ A+ +  ++   R
Sbjct: 637  INKKELHHVVAGIYERANRLNDASRIMNRMNKRR 670


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
            gi|449530101|ref|XP_004172035.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  950 bits (2455), Expect = 0.0
 Identities = 467/595 (78%), Positives = 536/595 (90%)
 Frame = +3

Query: 246  RRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQR 425
            RR +++++LD SIDM+ LL S+ QT NEQEL+++LSPYK R+LS RFMVSLLSRE DWQR
Sbjct: 82   RRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQR 141

Query: 426  SLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLI 605
            SLA+LDW+++ ALY PSV+AYNV +RN+LRAKQWE+A GLFDEMR R L+ DRYTYS LI
Sbjct: 142  SLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 201

Query: 606  THFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIT 785
            T+FGK G+FD+AL WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR+GIT
Sbjct: 202  TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 261

Query: 786  PDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSV 965
            PD+VAYNTMINVFGKAKLF EAR LL+EMR     PDTVSYSTLLNM+VEN++F+EALSV
Sbjct: 262  PDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSV 321

Query: 966  FSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGE 1145
             SEM E+ C LDLTTCNIMIDVYGQLDMVKEAD+LFW MRK+G+EPNVVSYNT+L+VYGE
Sbjct: 322  ISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGE 381

Query: 1146 AELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAIT 1325
            AELFGEAIHLFRLMQ K I+QNVVTYNTMIKIYGK+LEHEKA NL+Q+MQ RGIEPNAIT
Sbjct: 382  AELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAIT 441

Query: 1326 YSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR 1505
            YSTIIS+W KAGK+DR+AMLFQKLRSS  EIDQVLYQTMIVAYE+AGLV H+KRLLHEL+
Sbjct: 442  YSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK 501

Query: 1506 QPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAE 1685
            QPDNIPR  AITILA+AGRIEEATWVFRQAFDAG++KDISVF C+IDL+SRN+K+ N+ E
Sbjct: 502  QPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLE 561

Query: 1686 VFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYG 1865
            VFEKM+  G+FP+S+VIALVLNAYGKLR+FD ADALY EMQEEGCVF D+VHFQMLSLYG
Sbjct: 562  VFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYG 621

Query: 1866 VRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGI 2030
             R D+  +ESL ERLD+DPN+NKKELHLVV++IYER NR  DA+R+INRMN+  I
Sbjct: 622  ARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRIINRMNKIAI 676


>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Citrus sinensis]
          Length = 677

 Score =  949 bits (2452), Expect = 0.0
 Identities = 470/599 (78%), Positives = 536/599 (89%), Gaps = 2/599 (0%)
 Frame = +3

Query: 234  TQPYRR--RQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSR 407
            T+ YR   ++   +LD S+DM  LLKS+++T NE ELFALLSPYKDRQLS RFMVSLL+R
Sbjct: 71   TKYYRHPNKKAPVHLDHSVDMNELLKSISETQNEHELFALLSPYKDRQLSIRFMVSLLTR 130

Query: 408  EIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRY 587
            E ++QRS+A+LDW+++ A Y PSVFAYNV +RN+LRAKQWE+A GLFDEMR R ++PDRY
Sbjct: 131  EQNYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRY 190

Query: 588  TYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 767
            TYS LIT FGK G+FDSA+ WLQ+MEQDRVSGDLVLYSNLIEL+RKL DYSKAISIFSRL
Sbjct: 191  TYSTLITCFGKEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRL 250

Query: 768  KRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRF 947
            K +GI PDLVAYNTMINVFGKAKLF EAR+L+EEMR  G  PDTVSYSTLLN+YVEN +F
Sbjct: 251  KSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKF 310

Query: 948  VEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTL 1127
            VEALSVF+EMNE+ C LDLTTCNIMIDVYGQLDM K+AD+LFWSMRKMG++P+VVSYNTL
Sbjct: 311  VEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTL 370

Query: 1128 LKVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGI 1307
            L+VYGEAELFGEAIHLFRLMQ K I+QNVVTYNTMIKIYGKSLEHEKA NL+QEMQ RGI
Sbjct: 371  LRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGI 430

Query: 1308 EPNAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKR 1487
            EPNAITYSTII++W KAGK+DRAAMLFQKLRSS VEID VLYQTMIVAYER GLVAH+KR
Sbjct: 431  EPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKR 490

Query: 1488 LLHELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRK 1667
            LLHELRQP+ IPR  AITILARAGRIEEATWVFRQAFDAG+VKDISVFGC+I+L+SRN+K
Sbjct: 491  LLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKK 550

Query: 1668 YTNLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQ 1847
            Y N+ EVFEKM+ AGYFPDS++IALVLN+YGKLREF+ AD LY EMQEEGCVF D VHFQ
Sbjct: 551  YANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQ 610

Query: 1848 MLSLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEK 2024
            MLSLYG R DF+ +ESL ERLD+D N+NKKELH VV+ IYERANRLNDA+R++NRMN++
Sbjct: 611  MLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNKR 669



 Score =  100 bits (248), Expect = 3e-18
 Identities = 73/334 (21%), Positives = 146/334 (43%)
 Frame = +3

Query: 408  EIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRY 587
            ++D  +    L W        PSV +YN  +R    A+ +  A  LF  M+ + +  +  
Sbjct: 341  QLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVV 400

Query: 588  TYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 767
            TY+ +I  +GK+   + A   +Q+M+   +  + + YS +I +  K     +A  +F +L
Sbjct: 401  TYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKL 460

Query: 768  KRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRF 947
            + +G+  D V Y TMI  + +  L   A+ LL E+R     P+T+   T + +     R 
Sbjct: 461  RSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR----QPNTIPRETAITILARAGRI 516

Query: 948  VEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTL 1127
             EA  VF +  +     D++    MI+++ +        ++F  MR  G  P+      +
Sbjct: 517  EEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALV 576

Query: 1128 LKVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGI 1307
            L  YG+   F  A  L+  MQ +    +   +  M+ +YG   +     +L + +     
Sbjct: 577  LNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSN 636

Query: 1308 EPNAITYSTIISVWAKAGKMDRAAMLFQKLRSSR 1409
                  +  +  ++ +A +++ A+ +  ++   R
Sbjct: 637  INKKELHHVVAGIYERANRLNDASRIMNRMNKRR 670


>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
            gi|482554761|gb|EOA18954.1| hypothetical protein
            CARUB_v10007588mg [Capsella rubella]
          Length = 679

 Score =  944 bits (2440), Expect = 0.0
 Identities = 460/599 (76%), Positives = 540/599 (90%)
 Frame = +3

Query: 243  YRRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQ 422
            +RR Q++ +LD  +DM+ LL S+ QT NE+ELF+LLS YKD QLS RFMVSLLSRE DWQ
Sbjct: 79   HRRYQRSAFLDHDVDMDELLASIHQTQNEKELFSLLSSYKDGQLSIRFMVSLLSRENDWQ 138

Query: 423  RSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSML 602
            RSLALLDW+H+ A Y PSV+AYNV +RN+LRAKQ+++A GLFDEMR R L+PDRYTYS L
Sbjct: 139  RSLALLDWVHEEAKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTL 198

Query: 603  ITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGI 782
            IT FGK G+FDSAL WLQKMEQDRVSGDLVLYSNLIELSR+LCDYSKAISIFSRLK++GI
Sbjct: 199  ITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGI 258

Query: 783  TPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALS 962
            TPDLVAYN+MINV+GKAKLF EAR+L++EM   G  P+TVSYSTLL++YVENQ+F+EALS
Sbjct: 259  TPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALS 318

Query: 963  VFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYG 1142
            VF+EM E+ C LDLTTCNIMIDVYGQLDMVKEAD+LFWS+RKM +EPNVVSYNT+L+VYG
Sbjct: 319  VFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 378

Query: 1143 EAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAI 1322
            EAELFGEAIHLFRLMQ K+I+QNVVTYNTMIKIYGK++EHEKA NL++EMQ RGIEPNAI
Sbjct: 379  EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAI 438

Query: 1323 TYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHEL 1502
            TYSTIIS+W KAGK+DRAA LFQKLRSS VEIDQVLYQTMIVAYER GL+ H+KRLLHEL
Sbjct: 439  TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 498

Query: 1503 RQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLA 1682
            + PDNIPR  AITILA+AGR EEATWVFRQAF++G+VKDISVFGC+I+LYSRN++Y N+ 
Sbjct: 499  KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 558

Query: 1683 EVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLY 1862
            EVFEKM+ AGYFPDSN IA+VLNAYGK REF+KAD +YREMQEEGCVFPD+VHFQMLSLY
Sbjct: 559  EVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLY 618

Query: 1863 GVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP 2039
              + DF+ VE+L +RL+++PN+N KELHLVV+ +YERA++LNDA+RV+NRM E+GI+KP
Sbjct: 619  SSKKDFEMVETLFQRLESEPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 677


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 667

 Score =  944 bits (2440), Expect = 0.0
 Identities = 464/591 (78%), Positives = 533/591 (90%)
 Frame = +3

Query: 252  RQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQRSL 431
            R+Q  YLDRS+DME LL ++ QT NE EL+A++SPY  RQLS RFMVSLLSRE DWQR+L
Sbjct: 69   RRQQQYLDRSVDMEVLLAAIGQTQNEDELYAVMSPYNGRQLSMRFMVSLLSREPDWQRAL 128

Query: 432  ALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLITH 611
            ALLDW++D ALYRPS+FAYNV +RN+LRAKQW +A GLFDEMR + LSPDRYTYS LIT 
Sbjct: 129  ALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITC 188

Query: 612  FGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPD 791
            FGK GLFDS+L WLQ+MEQD VSGDLVLYSNLI+L+RKL DYSKAISIFSRLK + ITPD
Sbjct: 189  FGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPD 248

Query: 792  LVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVFS 971
            L+AYN+MINVFGKAKLF EAR+LL+EMR N   PDTVSYSTLL +YV+NQ+FVEALS+FS
Sbjct: 249  LIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFS 308

Query: 972  EMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEAE 1151
            EMNE +C LDLTTCNIMIDVYGQL M KEAD+LFWSMRKMG++PNV+SYNTLL+VYGEA+
Sbjct: 309  EMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEAD 368

Query: 1152 LFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYS 1331
            LFGEAIHLFRLMQ K++QQNVVTYNTMI IYGK+LEHEKA NL+QEM  RGIEPNAITYS
Sbjct: 369  LFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYS 428

Query: 1332 TIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQP 1511
            TIIS+W KAGK+DRAA+LFQKLRSS V ID+VLYQTMIVAYER GLVAH+KRLLHEL++P
Sbjct: 429  TIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRP 488

Query: 1512 DNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVF 1691
            DNIPR  AI ILARAGRIEEATWVFRQAFDA +VKDISVFGC+I+L+S+N+KY N+ EVF
Sbjct: 489  DNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVF 548

Query: 1692 EKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGVR 1871
            EKM+  GYFPDS+VIALVLNA+GKLREFDKADALYR+M EEGCVFPD+VHFQMLSLYG R
Sbjct: 549  EKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGAR 608

Query: 1872 GDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEK 2024
             DF  VESL E+LD++PN+NKKELHLVV++IYERA+RLNDA+R++NRMN+K
Sbjct: 609  KDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNKK 659



 Score =  113 bits (283), Expect = 3e-22
 Identities = 92/443 (20%), Positives = 190/443 (42%), Gaps = 66/443 (14%)
 Frame = +3

Query: 387  MVSLLSREIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHR 566
            ++ L  +  D+ +++++   +   +   P + AYN  I    +AK +  AR L  EMR  
Sbjct: 220  LIDLARKLSDYSKAISIFSRLK-ASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDN 278

Query: 567  TLSPDRYTYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKA 746
             + PD  +YS L+  +     F  AL    +M + +   DL   + +I++  +L    +A
Sbjct: 279  AVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEA 338

Query: 747  ISIFSRLKRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNM 926
              +F  +++ GI P++++YNT++ V+G+A LF EA  L   M+      + V+Y+T++N+
Sbjct: 339  DRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINI 398

Query: 927  YVENQRFVEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPN 1106
            Y +     +A ++  EMN+     +  T + +I ++ +   +  A  LF  +R  GV  +
Sbjct: 399  YGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRID 458

Query: 1107 VVSYNTLLKVYGEAELFGEAIHLFR----------------LMQCKNIQQ---------- 1208
             V Y T++  Y    L   A  L                  L +   I++          
Sbjct: 459  EVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEEATWVFRQAFD 518

Query: 1209 -----NVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAGKMDR 1373
                 ++  +  MI ++ K+ ++     + ++M+  G  P++   + +++ + K  + D+
Sbjct: 519  AREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDK 578

Query: 1374 A-----------------------------------AMLFQKLRSSRVEIDQVLYQTMIV 1448
            A                                     LF+KL S+     + L+  +  
Sbjct: 579  ADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVAS 638

Query: 1449 AYERAGLVAHSKRLLHELRQPDN 1517
             YERA  +  + R+++ + +  N
Sbjct: 639  IYERADRLNDASRIMNRMNKKAN 661



 Score = 89.7 bits (221), Expect = 5e-15
 Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 5/279 (1%)
 Frame = +3

Query: 1209 NVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAGKMDRAAMLF 1388
            ++  YN +++   ++ +   A  L  EM+ +G+ P+  TYST+I+ + K G  D +    
Sbjct: 143  SLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLFWL 202

Query: 1389 QKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQ----PDNIPRGAAITILARA 1556
            Q++    V  D VLY  +I    +    + +  +   L+     PD I   + I +  +A
Sbjct: 203  QQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKA 262

Query: 1557 GRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVFEKMQGAGYFPDSNVI 1736
                EA  + ++  D     D   +  L+ +Y  N+K+     +F +M  A    D    
Sbjct: 263  KLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTC 322

Query: 1737 ALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQ-MLSLYGVRGDFDAVESLLERLD 1913
             ++++ YG+L    +AD L+  M++ G + P+ + +  +L +YG    F     L   + 
Sbjct: 323  NIMIDVYGQLHMPKEADRLFWSMRKMG-IQPNVISYNTLLRVYGEADLFGEAIHLFRLMQ 381

Query: 1914 ADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGI 2030
            +         +  + NIY +      A  +I  MN++GI
Sbjct: 382  SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGI 420


>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 672

 Score =  942 bits (2435), Expect = 0.0
 Identities = 460/597 (77%), Positives = 532/597 (89%)
 Frame = +3

Query: 246  RRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQR 425
            R+ Q T +LD +IDM+ L  S+  T N+ +L +LLSPYK R LS RFMVSLLSRE DW+R
Sbjct: 75   RKLQGTAFLDHTIDMDDLAASIRATQNDHDLNSLLSPYKSRSLSIRFMVSLLSREPDWRR 134

Query: 426  SLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLI 605
            SLA+LDW++DVALY PSVFAYNV +RN+LRA QW++A GLFDEMRHR L+PDRYTYS LI
Sbjct: 135  SLAILDWINDVALYTPSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLI 194

Query: 606  THFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIT 785
            T FGKAG+FD+AL WLQKMEQDRVSGDLVLYSNLIELSRKLCDY+KAI+IFSRLKR GI 
Sbjct: 195  TAFGKAGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIV 254

Query: 786  PDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSV 965
            PDLVA+N+MINVFGKAKLF EAR LL+EMR  G  PDTVSYSTLL MYVEN++F+EAL V
Sbjct: 255  PDLVAFNSMINVFGKAKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGV 314

Query: 966  FSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGE 1145
            F EM+E++CGLD+TTCN+MIDVYGQLDM KEAD+LFWSMRKM +EPNVVSYNTLL+VYG+
Sbjct: 315  FREMSEVKCGLDITTCNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGD 374

Query: 1146 AELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAIT 1325
            AELFGEAIHLFR+MQ  +++QNVVTYNTMI+IYGKSLEHEKA NL+QEMQ RGI+PNAIT
Sbjct: 375  AELFGEAIHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAIT 434

Query: 1326 YSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR 1505
            YSTIIS+W +AGK+DRAAMLFQKLR+S VEIDQVLYQTMIV+YER GLVAH+KRLLHEL+
Sbjct: 435  YSTIISIWGRAGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELK 494

Query: 1506 QPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAE 1685
            +PDNIPR  AITILARAGR+EEATWVFRQAF+AG+VKDISVFGC+I+LYSRNRKY N  E
Sbjct: 495  RPDNIPRETAITILARAGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIE 554

Query: 1686 VFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYG 1865
            VFE M+ AGYFP S+VI LVLNAYGKLREF+KADA+YREMQEEGCVF D++HFQMLSLYG
Sbjct: 555  VFENMRVAGYFPASHVIGLVLNAYGKLREFEKADAVYREMQEEGCVFSDEIHFQMLSLYG 614

Query: 1866 VRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVK 2036
             R DF  VE++ ERL  DPN+NKKELHLVV+ IYER+NRLND+ R++NRMNE  ++K
Sbjct: 615  ARKDFKTVEAMFERLVCDPNINKKELHLVVAGIYERSNRLNDSHRIMNRMNESRVLK 671


>gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
          Length = 677

 Score =  937 bits (2421), Expect = 0.0
 Identities = 458/594 (77%), Positives = 534/594 (89%)
 Frame = +3

Query: 249  RRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQRS 428
            R+QQ T+LDRS+DME LL ++ +T NE EL+A++SPY  RQLS RFMVSLLSRE DWQR+
Sbjct: 78   RQQQATFLDRSMDMEELLAAIGETQNEDELYAVMSPYSGRQLSMRFMVSLLSREPDWQRT 137

Query: 429  LALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLIT 608
            +ALLDW+++ ALY PS+FAYNV +RN+LRAKQW +A GLFDEMRH+ LSPDRYTYS LIT
Sbjct: 138  VALLDWINEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTYSTLIT 197

Query: 609  HFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITP 788
             F K GLFDS+L WLQ+MEQD VSGDLVLYSNLI+L+RKLCDYSKAISIF+RLK + ITP
Sbjct: 198  SFAKDGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKASAITP 257

Query: 789  DLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVF 968
            DL+AYN+MINVFGKAKLF EAR+LL+EM  N   PDTVSYSTLL +YV+NQ+FVEALS+F
Sbjct: 258  DLIAYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLF 317

Query: 969  SEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEA 1148
            S+MNE +C LDLTTCNIMIDVYGQL M KEAD+LFWSMRKM ++PNVVSYNTLL+VYG+A
Sbjct: 318  SQMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLRVYGDA 377

Query: 1149 ELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITY 1328
            ELFGEAIHLFRLMQ K++ QNVVTYNTMI IYGK+LEHEKA NL+QEM+ R IEPNAITY
Sbjct: 378  ELFGEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPNAITY 437

Query: 1329 STIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQ 1508
            STIIS+W KAGK+DRAA+LFQKLRSS V ID+VLYQTMIVAYERAGLVAH+KRLLHEL++
Sbjct: 438  STIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKR 497

Query: 1509 PDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEV 1688
            PDNIPR  AI ILARAGRIEEATWVFRQAFDAG+VKDISVFGC+I+L+S+N+KY+N+ EV
Sbjct: 498  PDNIPRETAIVILARAGRIEEATWVFRQAFDAGEVKDISVFGCMINLFSKNKKYSNVVEV 557

Query: 1689 FEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGV 1868
            FEKM+  GYFPDS+VIALVLNA+GKLREFDKAD LYR+M EEGCVFPD+VHFQMLSLYG 
Sbjct: 558  FEKMRQVGYFPDSDVIALVLNAFGKLREFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGA 617

Query: 1869 RGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGI 2030
            R DF  VESL E+LD++PN+NKKELHLVV++IYERA+RLNDA+RV+N+ N+K I
Sbjct: 618  RKDFMMVESLFEKLDSNPNVNKKELHLVVASIYERADRLNDASRVMNKTNQKAI 671


>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  937 bits (2421), Expect = 0.0
 Identities = 464/592 (78%), Positives = 533/592 (90%)
 Frame = +3

Query: 249  RRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREIDWQRS 428
            RRQQ  Y DRS+DME LL ++ QT NE EL+A++SPY  RQLS RFMVSLLSRE DWQR+
Sbjct: 61   RRQQ--YWDRSVDMEELLAAIGQTQNEDELYAVMSPYNGRQLSMRFMVSLLSREPDWQRA 118

Query: 429  LALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTYSMLIT 608
            LALLDW++D ALY PS+FAYNV +RN+LRAKQW +A GLFDEMR + LSPDRYTYS LIT
Sbjct: 119  LALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLIT 178

Query: 609  HFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITP 788
             FGK GLFDS+L WLQ+MEQD VSGDLVLYSNLI+L+RKL DYSKAISIFSRLK + I+P
Sbjct: 179  SFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISP 238

Query: 789  DLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFVEALSVF 968
            DL+AYN+MINVFGKAKLF EAR+LL+EMR N   PDTVSYSTLL +YV+NQ+FVEALS+F
Sbjct: 239  DLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLF 298

Query: 969  SEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLLKVYGEA 1148
             EMNE +C LDLTTCNIMIDVYGQL M KEAD+LFWSMRKMG++PNVVSYNTLL+VYGEA
Sbjct: 299  FEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEA 358

Query: 1149 ELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITY 1328
            +LFGEAIHLFRLMQ K++QQNVVTYNTMI IYGK+LEHEKA NL+QEM+ RGIEPNAITY
Sbjct: 359  DLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITY 418

Query: 1329 STIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQ 1508
            STIIS+W KAGK+DRAA+LFQKLRSS V ID+VLYQTMIVAYERAGLVAH+KRLLHEL++
Sbjct: 419  STIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKR 478

Query: 1509 PDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEV 1688
            PDNIPR  AI ILARAGRIEEATWVFRQAFDA +VKDISVFGC+I+L+S+N+KY N+ EV
Sbjct: 479  PDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEV 538

Query: 1689 FEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQMLSLYGV 1868
            FEKM+  GYFPDS+VIALVLNA+GKLREFDKADALYR+M EEGCVFPD+VHFQMLSLYG 
Sbjct: 539  FEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGA 598

Query: 1869 RGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEK 2024
            R DF  VESL E+LD++PN+NKKELHLVV++IYERA+RLNDA+R++NRMN+K
Sbjct: 599  RKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNQK 650



 Score =  108 bits (270), Expect = 1e-20
 Identities = 92/443 (20%), Positives = 192/443 (43%), Gaps = 66/443 (14%)
 Frame = +3

Query: 387  MVSLLSREIDWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHR 566
            ++ L  +  D+ +++++   +   +   P + AYN  I    +AK +  AR L  EMR  
Sbjct: 211  LIDLARKLSDYSKAISIFSRLK-ASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDN 269

Query: 567  TLSPDRYTYSMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKA 746
             + PD  +YS L+  +     F  AL    +M + +   DL   + +I++  +L    +A
Sbjct: 270  AVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEA 329

Query: 747  ISIFSRLKRAGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNM 926
              +F  +++ GI P++V+YNT++ V+G+A LF EA  L   M+      + V+Y+T++N+
Sbjct: 330  DRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINI 389

Query: 927  YVENQRFVEALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVE-- 1100
            Y +     +A ++  EM +     +  T + +I ++ +   +  A  LF  +R  GV   
Sbjct: 390  YGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRID 449

Query: 1101 -----------------------------PNVVSYNTLLKVYGEAELFGEAIHLFRLMQC 1193
                                         P+ +  +T + +   A    EA  +FR    
Sbjct: 450  EVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILARAGRIEEATWVFRQAFD 509

Query: 1194 KNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAGKMDR 1373
                +++  +  MI ++ K+ ++     + ++M+  G  P++   + +++ + K  + D+
Sbjct: 510  AREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDK 569

Query: 1374 AAMLFQKLRSSR-VEIDQVLYQTM--------------------------------IVA- 1451
            A  L++++     V  D+V +Q +                                +VA 
Sbjct: 570  ADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVAS 629

Query: 1452 -YERAGLVAHSKRLLHELRQPDN 1517
             YERA  +  + R+++ + Q  N
Sbjct: 630  IYERADRLNDASRIMNRMNQKAN 652



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 5/279 (1%)
 Frame = +3

Query: 1209 NVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTIISVWAKAGKMDRAAMLF 1388
            ++  YN +++   ++ +   A  L  EM+ +G+ P+  TYST+I+ + K G  D +    
Sbjct: 134  SLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSSLFWL 193

Query: 1389 QKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELR----QPDNIPRGAAITILARA 1556
            Q++    V  D VLY  +I    +    + +  +   L+     PD I   + I +  +A
Sbjct: 194  QQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKA 253

Query: 1557 GRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVFEKMQGAGYFPDSNVI 1736
                EA  + ++  D     D   +  L+ +Y  N+K+     +F +M  A    D    
Sbjct: 254  KLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTC 313

Query: 1737 ALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQ-MLSLYGVRGDFDAVESLLERLD 1913
             ++++ YG+L    +AD L+  M++ G + P+ V +  +L +YG    F     L   + 
Sbjct: 314  NIMIDVYGQLHMPKEADRLFWSMRKMG-IQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQ 372

Query: 1914 ADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGI 2030
            +         +  + NIY +      A  +I  M ++GI
Sbjct: 373  SKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGI 411


>ref|XP_004502213.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
            chloroplastic-like [Cicer arietinum]
          Length = 669

 Score =  902 bits (2332), Expect = 0.0
 Identities = 441/600 (73%), Positives = 521/600 (86%), Gaps = 1/600 (0%)
 Frame = +3

Query: 234  TQPYRRRQQTTYLDRSIDMEGLLKSLAQTSNEQELFALLSPYKDRQLSARFMVSLLSREI 413
            T+  +++ Q TYLDR+++M  LL S+ QT N Q+L A++SPY    LS RFMVSLLSRE 
Sbjct: 64   TRTQQQQHQPTYLDRTVNMNELLTSIGQTQNVQQLHAVMSPYNGTNLSIRFMVSLLSREP 123

Query: 414  DWQRSLALLDWMHDVALYRPSVFAYNVTIRNLLRAKQWEVARGLFDEMRHRTLSPDRYTY 593
            DWQR+LALLDWM++ A Y PSV AYNV +RN+LRAKQW  A GLFDEMR + +SPD+YTY
Sbjct: 124  DWQRALALLDWMNEKARYSPSVSAYNVVLRNVLRAKQWLFAHGLFDEMRQKGISPDKYTY 183

Query: 594  SMLITHFGKAGLFDSALGWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKR 773
            S LITHFGK GLFDS+  WLQ+ME+D VSGDLVLYSNLIELSRKLCDYSKAISIF+ LK 
Sbjct: 184  STLITHFGKHGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKAISIFNTLKA 243

Query: 774  -AGITPDLVAYNTMINVFGKAKLFTEARMLLEEMRGNGFNPDTVSYSTLLNMYVENQRFV 950
             A I PDL+AYNTMI+VFGKAK F EAR+LL+EMR NG NP+TVSYSTLL +YV+NQ+FV
Sbjct: 244  SANIVPDLIAYNTMISVFGKAKHFREARLLLQEMRDNGVNPNTVSYSTLLAIYVDNQKFV 303

Query: 951  EALSVFSEMNELRCGLDLTTCNIMIDVYGQLDMVKEADKLFWSMRKMGVEPNVVSYNTLL 1130
            EALS+FSEMNE  C LDLTTCNIMIDVYGQL M+KEAD  FW MRKMG+EPNVVSYNT+L
Sbjct: 304  EALSLFSEMNETECVLDLTTCNIMIDVYGQLHMIKEADCFFWGMRKMGIEPNVVSYNTIL 363

Query: 1131 KVYGEAELFGEAIHLFRLMQCKNIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIE 1310
            +VYGEAEL+GEA+HLF LMQ K + QNVVTYNTMI IYGKSLEHEKA NL+QEMQ RG++
Sbjct: 364  RVYGEAELYGEAVHLFSLMQRKGVPQNVVTYNTMISIYGKSLEHEKATNLIQEMQSRGVQ 423

Query: 1311 PNAITYSTIISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRL 1490
            PNAITYSTIIS+W KAGK+DRAAMLF KLRSS V+ID VLYQTMIVAY++AGLVAH+KRL
Sbjct: 424  PNAITYSTIISIWEKAGKLDRAAMLFHKLRSSGVKIDDVLYQTMIVAYQKAGLVAHAKRL 483

Query: 1491 LHELRQPDNIPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKY 1670
            LHEL+QPDN+ R  AIT+LARAG+++EA WVFRQAFDAG+VKDISVFGC+ID++SRNRKY
Sbjct: 484  LHELKQPDNVSRETAITVLARAGKVDEAMWVFRQAFDAGEVKDISVFGCMIDVFSRNRKY 543

Query: 1671 TNLAEVFEKMQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQM 1850
             ++ EVFEKM+  G+FPDSNVIALVLNA+GKLR+F+KADALY++M E+GCVFPD+VHFQM
Sbjct: 544  AHVVEVFEKMREFGHFPDSNVIALVLNAFGKLRKFEKADALYKQMYEKGCVFPDEVHFQM 603

Query: 1851 LSLYGVRGDFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGI 2030
            LSLYG R DF  VESL E++D+ PN+NKKEL+ VV+NIYERA+R NDA+R++NR+N K I
Sbjct: 604  LSLYGARMDFTRVESLFEKIDSHPNINKKELYFVVANIYERADRFNDASRIMNRLNHKAI 663



 Score =  112 bits (279), Expect = 9e-22
 Identities = 94/421 (22%), Positives = 189/421 (44%), Gaps = 5/421 (1%)
 Frame = +3

Query: 810  MINVFGKAKLFTEARMLLEEMRGNG-FNPDTVSYSTLLNMYVENQRFVEALSVFSEMNEL 986
            M+++  +   +  A  LL+ M     ++P   +Y+ +L   +  ++++ A  +F EM + 
Sbjct: 115  MVSLLSREPDWQRALALLDWMNEKARYSPSVSAYNVVLRNVLRAKQWLFAHGLFDEMRQK 174

Query: 987  RCGLDLTTCNIMIDVYGQLDMVKEADKLFW--SMRKMGVEPNVVSYNTLLKVYGEAELFG 1160
                D  T + +I  +G+  +   +   FW   M +  V  ++V Y+ L+++  +   + 
Sbjct: 175  GISPDKYTYSTLITHFGKHGLFDSS--FFWLQQMERDNVSGDLVLYSNLIELSRKLCDYS 232

Query: 1161 EAIHLFRLMQCK-NIQQNVVTYNTMIKIYGKSLEHEKAGNLLQEMQGRGIEPNAITYSTI 1337
            +AI +F  ++   NI  +++ YNTMI ++GK+    +A  LLQEM+  G+ PN ++YST+
Sbjct: 233  KAISIFNTLKASANIVPDLIAYNTMISVFGKAKHFREARLLLQEMRDNGVNPNTVSYSTL 292

Query: 1338 ISVWAKAGKMDRAAMLFQKLRSSRVEIDQVLYQTMIVAYERAGLVAHSKRLLHELRQPDN 1517
            ++++    K   A  LF ++  +   +D      MI  Y +          LH +++ D 
Sbjct: 293  LAIYVDNQKFVEALSLFSEMNETECVLDLTTCNIMIDVYGQ----------LHMIKEADC 342

Query: 1518 IPRGAAITILARAGRIEEATWVFRQAFDAGKVKDISVFGCLIDLYSRNRKYTNLAEVFEK 1697
                                W  R+    G   ++  +  ++ +Y     Y     +F  
Sbjct: 343  F------------------FWGMRKM---GIEPNVVSYNTILRVYGEAELYGEAVHLFSL 381

Query: 1698 MQGAGYFPDSNVIALVLNAYGKLREFDKADALYREMQEEGCVFPDDVHFQ-MLSLYGVRG 1874
            MQ  G   +      +++ YGK  E +KA  L +EMQ  G V P+ + +  ++S++   G
Sbjct: 382  MQRKGVPQNVVTYNTMISIYGKSLEHEKATNLIQEMQSRG-VQPNAITYSTIISIWEKAG 440

Query: 1875 DFDAVESLLERLDADPNMNKKELHLVVSNIYERANRLNDAARVINRMNEKGIVKP*SA*T 2054
              D    L  +L +        L+  +   Y++A  +  A R+++ + +   V   +A T
Sbjct: 441  KLDRAAMLFHKLRSSGVKIDDVLYQTMIVAYQKAGLVAHAKRLLHELKQPDNVSRETAIT 500

Query: 2055 V 2057
            V
Sbjct: 501  V 501