BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00017142
         (249 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    63   4e-08
gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]           57   2e-06

>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 46/106 (43%), Positives = 50/106 (47%), Gaps = 36/106 (33%)
 Frame = +1

Query: 40  DETT*HTTITYRSPSARQYGTSQ-LRCLYGVLSG*VGPSLS------------------- 159
           D+ T +  +    PSARQYGTSQ L  LY   +G   P L                    
Sbjct: 358 DDVTYYDHVQKCCPSARQYGTSQQLPFLYEKGTGPHSPPLGFFFPYLRAHCVSTGEKEVD 417

Query: 160 ----------------PFPRRGRAVFPQRPASGGRKRTRVGSARFA 249
                            FPR GRAVFPQRPASGGRKRTRVGSARFA
Sbjct: 418 FTEEEGAGRVLVGPHPRFPRGGRAVFPQRPASGGRKRTRVGSARFA 463



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/67 (50%), Positives = 36/67 (53%)
 Frame = +3

Query: 3   RNIVHRYYSMQRRRDDVTYYDHVQKPFGSTIWNFSTSLPLWSPIGIGRPQPFPFPEKGPG 182
           RNIVHRY SMQR RDDVTYYDHVQK             P     G  +  PF + EKG G
Sbjct: 344 RNIVHRYSSMQRGRDDVTYYDHVQK-----------CCPSARQYGTSQQLPFLY-EKGTG 391

Query: 183 CLSPAAG 203
             SP  G
Sbjct: 392 PHSPPLG 398


>gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]
          Length = 158

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +1

Query: 163 FPRRGRAVFPQRPASGGRKRTRVGSARFA 249
           FPR GRAV PQRPASGGRKRTRVGSARFA
Sbjct: 122 FPRGGRAVIPQRPASGGRKRTRVGSARFA 150