BLASTX nr result
ID: Rheum21_contig00016942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016942
(371 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470378.1| PREDICTED: RING-H2 finger protein ATL46-like... 70 3e-10
ref|XP_006446456.1| hypothetical protein CICLE_v10015556mg [Citr... 70 3e-10
ref|XP_004157840.1| PREDICTED: RING-H2 finger protein ATL46-like... 69 6e-10
ref|XP_004152548.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing... 69 6e-10
gb|EOY02338.1| RING/U-box superfamily protein isoform 1 [Theobro... 68 1e-09
ref|XP_006345034.1| PREDICTED: RING-H2 finger protein ATL46-like... 67 2e-09
ref|XP_004236125.1| PREDICTED: RING-H2 finger protein ATL46-like... 67 3e-09
ref|XP_006836651.1| hypothetical protein AMTR_s00088p00040490 [A... 66 5e-09
ref|XP_004233335.1| PREDICTED: RING-H2 finger protein ATL46-like... 65 1e-08
ref|XP_002511433.1| ring finger protein, putative [Ricinus commu... 64 2e-08
emb|CBI32123.3| unnamed protein product [Vitis vinifera] 51 2e-08
ref|XP_004232284.1| PREDICTED: RING-H2 finger protein ATL46-like... 64 2e-08
gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus pe... 63 4e-08
ref|XP_004304601.1| PREDICTED: RING-H2 finger protein ATL46-like... 63 5e-08
gb|EXC16033.1| RING-H2 finger protein ATL46 [Morus notabilis] 62 8e-08
ref|XP_006483811.1| PREDICTED: RING-H2 finger protein ATL47-like... 62 8e-08
ref|XP_006438441.1| hypothetical protein CICLE_v10031917mg [Citr... 62 8e-08
ref|XP_006338542.1| PREDICTED: RING-H2 finger protein ATL46-like... 62 1e-07
ref|XP_002324007.2| hypothetical protein POPTR_0017s10860g [Popu... 62 1e-07
ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like... 62 1e-07
>ref|XP_006470378.1| PREDICTED: RING-H2 finger protein ATL46-like [Citrus sinensis]
Length = 388
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/86 (50%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Frame = +3
Query: 3 DARRCYSLGSCQYV-------IXXXXXXXXXXXXXXXXXXXNR------EVEAKRISGSN 143
DARRCYS+GS QYV + NR +VEAK+IS
Sbjct: 283 DARRCYSMGSYQYVLGNSDLRVSLCTDRCGRDTKLSKGTENNRNSPVDGDVEAKKISNMA 342
Query: 144 KGESFSVSKIWQWSKKGKFSSSSRCQ 221
KGESFSVSKIW WSKKGKFSSSS Q
Sbjct: 343 KGESFSVSKIWLWSKKGKFSSSSDAQ 368
>ref|XP_006446456.1| hypothetical protein CICLE_v10015556mg [Citrus clementina]
gi|557549067|gb|ESR59696.1| hypothetical protein
CICLE_v10015556mg [Citrus clementina]
Length = 387
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/86 (50%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Frame = +3
Query: 3 DARRCYSLGSCQYV-------IXXXXXXXXXXXXXXXXXXXNR------EVEAKRISGSN 143
DARRCYS+GS QYV + NR +VEAK+IS
Sbjct: 282 DARRCYSMGSYQYVLGNSDLRVSLCTDRCGRDTKLSKGTENNRNSPVDGDVEAKKISNMA 341
Query: 144 KGESFSVSKIWQWSKKGKFSSSSRCQ 221
KGESFSVSKIW WSKKGKFSSSS Q
Sbjct: 342 KGESFSVSKIWLWSKKGKFSSSSDAQ 367
>ref|XP_004157840.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
Length = 354
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/75 (45%), Positives = 44/75 (58%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNREVEAKRISGSNKGESFSVSKIWQW 182
+ARRCYS+G+ QYV+ N E++ K+ISG +KGESFSVSKIWQW
Sbjct: 274 NARRCYSMGTYQYVVGESDLQVMKEKLNIENVRGNGEMDGKKISGRSKGESFSVSKIWQW 333
Query: 183 SKKGKFSSSSRCQFE 227
SKK + +S E
Sbjct: 334 SKKSELPITSSSNSE 348
>ref|XP_004152548.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL46-like
[Cucumis sativus]
Length = 349
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/75 (45%), Positives = 44/75 (58%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNREVEAKRISGSNKGESFSVSKIWQW 182
+ARRCYS+G+ QYV+ N E++ K+ISG +KGESFSVSKIWQW
Sbjct: 269 NARRCYSMGTYQYVVGESDLQVMKEKLNIENVRGNGEMDGKKISGRSKGESFSVSKIWQW 328
Query: 183 SKKGKFSSSSRCQFE 227
SKK + +S E
Sbjct: 329 SKKSELPITSSSNSE 343
>gb|EOY02338.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|508710442|gb|EOY02339.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 400
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/87 (45%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXN--------------REVEAKRISGS 140
DARRC+S+GS QYV+ R+ EAK+IS
Sbjct: 294 DARRCFSMGSYQYVLGDSDLRVALSNDRSSGCDVKLSKGLEQNGNSSVERDAEAKKISSV 353
Query: 141 NKGESFSVSKIWQWSKKGKFSSSSRCQ 221
KGESFSVSKIW WSKKGKFSSSS Q
Sbjct: 354 AKGESFSVSKIWLWSKKGKFSSSSDAQ 380
>ref|XP_006345034.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum tuberosum]
Length = 312
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNREV-----EAKRISGSNKGESFSVS 167
DARRC+S+GS QYV+ + E K+IS KGESFSVS
Sbjct: 216 DARRCFSMGSFQYVVGDSELQIALPNVKILKAKCENTIFGANAEGKKISARTKGESFSVS 275
Query: 168 KIWQWSKKGKFSSSS 212
KIW WSKKGKFS+SS
Sbjct: 276 KIWLWSKKGKFSNSS 290
>ref|XP_004236125.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Length = 312
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNR-----EVEAKRISGSNKGESFSVS 167
DARRC+S+GS QYV+ E K+IS KGESFSVS
Sbjct: 216 DARRCFSMGSFQYVVGDSELQIALPNVKILKAKCENTNFGANAEGKKISARTKGESFSVS 275
Query: 168 KIWQWSKKGKFSSSSRCQFE 227
KIW WSKKGKFS+SS +
Sbjct: 276 KIWLWSKKGKFSNSSETNID 295
>ref|XP_006836651.1| hypothetical protein AMTR_s00088p00040490 [Amborella trichopoda]
gi|548839211|gb|ERM99504.1| hypothetical protein
AMTR_s00088p00040490 [Amborella trichopoda]
Length = 393
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/74 (50%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNRE-----VEAKRISGSNKGESFSVS 167
DARRCYS+GS QYV+ N E +EAK++S + K ESFSVS
Sbjct: 310 DARRCYSMGSFQYVLGTNDLRVAVTPAKKMRIPANLESRNCDLEAKKLSNAGKFESFSVS 369
Query: 168 KIWQWSKKGKFSSS 209
KIWQWSKK K SSS
Sbjct: 370 KIWQWSKKDKCSSS 383
>ref|XP_004233335.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Length = 384
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/90 (42%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNREV--------------EAKRISGS 140
DARRCYSLGS QYV+ ++ E KRIS
Sbjct: 279 DARRCYSLGSYQYVVGDFNLMVDLSSEQNAYNVKLAKLRERCANLSIESDGEEGKRISIG 338
Query: 141 NKGESFSVSKIWQWSKKGKFSSSSRCQFEH 230
K +S+S SKIW WSKKGKF+SSS CQ E+
Sbjct: 339 TKTDSYSFSKIWLWSKKGKFASSSECQLEN 368
>ref|XP_002511433.1| ring finger protein, putative [Ricinus communis]
gi|223550548|gb|EEF52035.1| ring finger protein,
putative [Ricinus communis]
Length = 354
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNRE-------VEAKRISGSNKGESFS 161
DARRCYSLG+ QYV+ E VE K+I+G +G+SFS
Sbjct: 269 DARRCYSLGTVQYVVGDSNLQVALSHHDSINVRGEYESSAVDGDVEGKKINGRTRGDSFS 328
Query: 162 VSKIWQWSKKGKFSSSS 212
VSKIW WSKK KF SS+
Sbjct: 329 VSKIWLWSKKNKFPSST 345
>emb|CBI32123.3| unnamed protein product [Vitis vinifera]
Length = 184
Score = 50.8 bits (120), Expect(2) = 2e-08
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +3
Query: 111 EVEAKRISGSNKGESFSVSKIWQWSKKGKFSSSS 212
+VE K+IS +K ESFSVSKIW W KKGKF SSS
Sbjct: 104 DVEGKKISIGSKDESFSVSKIWLWPKKGKFPSSS 137
Score = 33.1 bits (74), Expect(2) = 2e-08
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 1 WMQGGAIHWVHASM*LLIRICSFRC 75
WMQG WV ++M LLIR C + C
Sbjct: 69 WMQGDVSRWVRSNMWLLIRTCRWPC 93
>ref|XP_004232284.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Length = 390
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX-------------NREVEAKRISGSN 143
DARRC+S+GS QYV+ + E+E K+I
Sbjct: 285 DARRCFSMGSYQYVVGDANLKVALDNERKTNNMNQANLAEHGPNPSIDEEIEGKKIGIGT 344
Query: 144 KGESFSVSKIWQWSKKGKFSSSSRCQFE 227
K +S+SVSKIW WSK+GKF+SSS CQ E
Sbjct: 345 KTDSYSVSKIWLWSKRGKFASSSDCQME 372
>gb|EMJ16759.1| hypothetical protein PRUPE_ppa007393mg [Prunus persica]
Length = 369
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX-------------NREVEAKRISGSN 143
DARRC+S+GS QYV+ + +VE K+IS
Sbjct: 264 DARRCFSMGSYQYVLGDSDLQVPLSNDQQDRNIKLTRGIERDGNPSIDSDVEGKKISSVT 323
Query: 144 KGESFSVSKIWQWSKKGKFSSS 209
KGES+SVSKIW WSKKGKFSSS
Sbjct: 324 KGESYSVSKIWLWSKKGKFSSS 345
>ref|XP_004304601.1| PREDICTED: RING-H2 finger protein ATL46-like [Fragaria vesca subsp.
vesca]
Length = 368
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX------------NREVEAKRISGSNK 146
DARRCYS+GS QYV+ + +VEAK+I +
Sbjct: 261 DARRCYSMGSYQYVLDNSELRVALSKDQQGRNIKLTKEEHSGNPSIDSDVEAKKIGSVTR 320
Query: 147 GESFSVSKIWQWSKKGKFSSS 209
GES+SVSKIW WSKKGK+SSS
Sbjct: 321 GESYSVSKIWLWSKKGKYSSS 341
>gb|EXC16033.1| RING-H2 finger protein ATL46 [Morus notabilis]
Length = 371
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXN----REVEAKRISGSNKGESFSVSK 170
DARRCYS+G+ QYV+ ++E K+ISG KGESFSVSK
Sbjct: 269 DARRCYSMGTFQYVVGNSDLQVTLSRATSGDRRGKFSVGSDLEGKKISGRQKGESFSVSK 328
Query: 171 IWQWSKKGKFSSSS 212
IW WSK +F S S
Sbjct: 329 IWLWSKNSRFPSCS 342
>ref|XP_006483811.1| PREDICTED: RING-H2 finger protein ATL47-like isoform X1 [Citrus
sinensis] gi|568860616|ref|XP_006483812.1| PREDICTED:
RING-H2 finger protein ATL47-like isoform X2 [Citrus
sinensis]
Length = 388
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX---------------NREVEAKRISG 137
+ARRCYS+GS QYV+ + +VE K+I+
Sbjct: 282 EARRCYSMGSYQYVVADSELQVALCPRRGGSASVRFGKGRSAQNDNSSNDGDVEGKKINF 341
Query: 138 SNKGESFSVSKIWQWSKKGKFSSSS 212
+KGESFSVSKIWQWSKK KF SSS
Sbjct: 342 RSKGESFSVSKIWQWSKKSKFPSSS 366
>ref|XP_006438441.1| hypothetical protein CICLE_v10031917mg [Citrus clementina]
gi|557540637|gb|ESR51681.1| hypothetical protein
CICLE_v10031917mg [Citrus clementina]
Length = 360
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/85 (42%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX---------------NREVEAKRISG 137
+ARRCYS+GS QYV+ + +VE K+I+
Sbjct: 254 EARRCYSMGSYQYVVADSELQVALCPRRGGSASVRFGKGRSAQNDNSSNDGDVEGKKINF 313
Query: 138 SNKGESFSVSKIWQWSKKGKFSSSS 212
+KGESFSVSKIWQWSKK KF SSS
Sbjct: 314 RSKGESFSVSKIWQWSKKSKFPSSS 338
>ref|XP_006338542.1| PREDICTED: RING-H2 finger protein ATL46-like [Solanum tuberosum]
Length = 392
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXX-------------NREVEAKRISGSN 143
DARRC+S+GS QYV+ + E E K+I
Sbjct: 287 DARRCFSMGSYQYVVGDGNLKVALDNERKTNNMNQANLAEHSPNPSIDEENEGKKIGIGT 346
Query: 144 KGESFSVSKIWQWSKKGKFSSSSRCQFE 227
K +S+SVSKIW WSK+GKF+SSS CQ E
Sbjct: 347 KTDSYSVSKIWLWSKRGKFASSSDCQME 374
>ref|XP_002324007.2| hypothetical protein POPTR_0017s10860g [Populus trichocarpa]
gi|550319999|gb|EEF04140.2| hypothetical protein
POPTR_0017s10860g [Populus trichocarpa]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXN-------------REVEAKRISGSN 143
DARRC+S+GS QYV+ + R++E +IS
Sbjct: 266 DARRCFSMGSYQYVLDDTDLRVALGKERHSHDITHARGTEQDVNLSVDRDLEENKISSLI 325
Query: 144 KGESFSVSKIWQWSKKGKFSSSS 212
KGESFSVSKIW W KKGKFSSSS
Sbjct: 326 KGESFSVSKIWLWRKKGKFSSSS 348
>ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
Length = 410
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Frame = +3
Query: 3 DARRCYSLGSCQYVIXXXXXXXXXXXXXXXXXXXNR-----------------EVEAKRI 131
DARRCYS+GS QYV+ R +VEAK+I
Sbjct: 299 DARRCYSMGSYQYVVGNSDLRVTLNHDEIGKGQVTRLTKGMELDDGKVSVEEGDVEAKKI 358
Query: 132 SGSNKGESFSVSKIWQWSKKGKFSSSSRCQF 224
S +KG+SFSVSKIW W KKGK +S QF
Sbjct: 359 SSVSKGDSFSVSKIWLWPKKGKLPTSLDGQF 389