BLASTX nr result

ID: Rheum21_contig00016914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016914
         (872 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004489199.1| PREDICTED: uncharacterized protein LOC101503...    75   4e-11
ref|XP_002298551.1| group II intron splicing factor CRS1-related...    60   8e-07

>ref|XP_004489199.1| PREDICTED: uncharacterized protein LOC101503999 [Cicer arietinum]
          Length = 648

 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 78/315 (24%), Positives = 116/315 (36%), Gaps = 29/315 (9%)
 Frame = +3

Query: 3    DSEDEELDKFXXXXXXXXXXXXXXXXXXXXXXFDRIRYWNREDYNGRFGRPEKVGENDFD 182
            DS+ EELD+F                      F R+RYWNRE++ GRF R +    +D+D
Sbjct: 344  DSDQEELDRFIAEIEDAADKEYEEEEAKEKEEFGRLRYWNREEFGGRFRRSDASRNDDYD 403

Query: 183  NG-MRGDRTRKDVHKK----------KLKFXXXXXXXXXXXXXXXXXXXXXXGRRPRGND 329
             G +RG R R+ +H K             F                           G+D
Sbjct: 404  GGEVRGSRARQTIHPKHRTIDSDDEENAHFDNDDDDDHGEWRSSNIADDSDIDSNSDGSD 463

Query: 330  AYRSTSRVERG---------------NNALRKPADFKSRRERAGFDRVSEEPLSDLENAM 464
              R   +  RG               N    +  + K RR  A  D  SE  LS++ENAM
Sbjct: 464  EGRGRFKENRGRRERINNTGIGKAHVNGGPSRHGEAKFRRNMAVQDSESEGMLSEVENAM 523

Query: 465  FXXXXXXXN--HQRTSRSVSRKSNDVSGEGY-FKPSIYRDRGGKHDRFGRGSTHENATNS 635
            +          H R + S + KS+  S + Y ++    +  G +    G G T     + 
Sbjct: 524  WESDEEENGSVHLRRASSDNYKSSSSSDDEYDYQLKRNKKNGARDHEIGGGRT----KSV 579

Query: 636  RPGSTRRGAMNGSESDPEIEVWDSDDMEELDSSALKAAEDDYQGSFGDANHGNKEDNDRM 815
            R G  R G      +D  +     D M + D+     A+ DY  S     + N   +D  
Sbjct: 580  RGGQERIGGTKSVSAD--LFSGSEDWMWQSDAEENSRADKDYPTS----KNINVVKSDIH 633

Query: 816  KKKTAQKKDDDWESD 860
            K K  +  D+ W+S+
Sbjct: 634  KNKAPKDADEAWDSE 648


>ref|XP_002298551.1| group II intron splicing factor CRS1-related family protein
           [Populus trichocarpa] gi|222845809|gb|EEE83356.1| group
           II intron splicing factor CRS1-related family protein
           [Populus trichocarpa]
          Length = 496

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 52/189 (27%), Positives = 74/189 (39%), Gaps = 6/189 (3%)
 Frame = +3

Query: 3   DSEDEELDKFXXXXXXXXXXXXXXXXXXXXXXFDRIRYWNREDYNGRFGRPEKVGENDFD 182
           +S+ EELD+F                      F RIRYWNREDY GR   PE       D
Sbjct: 270 ESDQEELDRFIAEIEDAADQEWAAEEAAEKEEFGRIRYWNREDYGGRIRSPEIHRSEVSD 329

Query: 183 NGMRGDRTRKDVHKKKLKFXXXXXXXXXXXXXXXXXXXXXXGRRPRGNDAYRSTSRVERG 362
              RG R  +D   K++                          R R     R    + R 
Sbjct: 330 GEARGARHWRDARDKRMSSNRDDDSDVSEGDNEWNVRDNSDHERLR-----RKQDGIGRE 384

Query: 363 NNA--LRKPADFKSRRERAGFDRVSEEPLSDLENAMFXXXXXXXNHQRTSRS----VSRK 524
            NA  +++  + + + + A  D  SEE LSDL+NAM+       +  RTSR+    + + 
Sbjct: 385 YNAHDIKRKFEPEFKEKMAEEDSESEEMLSDLDNAMWQSDAEEEHVSRTSRAEASPIFKS 444

Query: 525 SNDVSGEGY 551
           S+D   + Y
Sbjct: 445 SSDDEEDTY 453


Top