BLASTX nr result

ID: Rheum21_contig00016817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016817
         (853 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    60   1e-06

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
 Frame = +3

Query: 51  LNLVFDDGAYWNGKAIWLR-RESPDLYEIDSPIYRVLDLE--RNTFNEYSLPCVYSMVCH 221
           +++ F  G YWNG   W+  RE+   ++++  + R + +    +  NE  + C       
Sbjct: 197 ISVDFPSGVYWNGAIHWISPREASLYFDLNEELVREMPMPPVPDDSNERGIRC------- 249

Query: 222 FGESMGHLHLV---TKDREAFNLFEM-GENVEWVLKFRVMESVMRTRLTG---GYLAICN 380
           FGES GHLHLV         FN++EM  ++  W +KFRV  + +     G   GY    +
Sbjct: 250 FGESCGHLHLVEIYESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYD 309

Query: 381 FVWDGSWVLSVARKPEEGDEEEDSYHVIWYLPSGAGRVVSYNCKTSLVSCLSESMIP--- 551
           +++  S VL + R+    ++EEDS+  + ++P   G+V+ YN  +      S++  P   
Sbjct: 310 YMYSFS-VLCIVRR----EKEEDSFLAL-HIP---GKVIGYNFSSKSYQ-TSDTDCPLAF 359

Query: 552 --GKTFQFIESL 581
                FQ+IESL
Sbjct: 360 GWSYAFQYIESL 371


Top