BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016790
         (899 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   199   9e-49
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   197   4e-48
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   191   4e-46
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   189   1e-45
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   178   2e-45
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   183   7e-44
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]   176   9e-44
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    182   2e-43
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                    180   7e-43
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...   180   7e-43
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]                    179   2e-42
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    178   3e-42
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   177   4e-42
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   177   4e-42
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|...   177   4e-42
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]                    177   4e-42
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]                    177   4e-42
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]                    177   4e-42
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    177   4e-42
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                    177   4e-42

>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  199 bits (507), Expect = 9e-49
 Identities = 129/296 (43%), Positives = 161/296 (54%), Gaps = 13/296 (4%)
 Frame = -2

Query: 883  PQRPHASPMPYTSLMGRLKPNHNLHLPPTQPRLYRNHYPTPHTHAATIITYS*---SRHN 713
            P  P   P+P  +      P+ ++   P          P   T AAT  + S    + H 
Sbjct: 863  PNSPFIGPLPNPN--PETNPSSSIEQRPVDKSTTTALPPNQTTIAATSNSRSQPPKNNHQ 920

Query: 712  YSLKK*HNGTHPKT*PCNPTLLSHIIQYHY-------QALKDPDWRAAMQKEFDARS-NH 557
               +  +N T PKT     +L   + Q H        QALKD  WR AM  EFDA+  NH
Sbjct: 921  MKTRSKNNITKPKT---KTSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDEFDAQQRNH 977

Query: 556  TWDLVSTRLIKIL*DASGC--IRSNIFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSPV 383
            TWDLV     + L    GC  +    +L    ID   A  V KGF+ +  +DY ETFSPV
Sbjct: 978  TWDLVPPNPTQHL---VGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFSPV 1034

Query: 382  VITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKK 203
            +   T+R+VL  AV K W LK+LD+NNAFLQGTL E+VYM QP G VD    +H CRL+K
Sbjct: 1035 IKATTIRVVLDVAVKKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSHVCRLRK 1094

Query: 202  ALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDIIFT 35
            A+YG KQAPR  Y EL  +L+   F NS++  SLFIY HG TL+YL VYVDDII T
Sbjct: 1095 AIYGLKQAPRAWYMELKQHLLNIGFVNSLADTSLFIYSHGTTLLYLLVYVDDIIVT 1150


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  197 bits (501), Expect = 4e-48
 Identities = 113/228 (49%), Positives = 142/228 (62%), Gaps = 3/228 (1%)
 Frame = -2

Query: 685  THPKT*PCNPTLLSHIIQYHYQALKDPDWRAAMQKEFDARS-NHTWDLVSTRLIKIL*DA 509
            T P   P  PT ++       QALKD  WR AM  EFDA+  NHTWDLV      ++   
Sbjct: 957  TLPNRSPSEPTNVT-------QALKDKKWRFAMSDEFDAQQRNHTWDLVPHESQLLV--- 1006

Query: 508  SGC--IRSNIFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTK 335
             GC  +    +L    ID   A  V KGF+ +  +DY ETFSPV+ + T+R+VL  AV K
Sbjct: 1007 -GCKWVFKLKYLPNGAIDKYKARLVAKGFNQQYGVDYAETFSPVIKSTTIRLVLDVAVKK 1065

Query: 334  GWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSEL 155
             W++K+LD+NNAFLQGTL E+VYM QP G +D    TH CRL+KA+YG KQAPR  Y EL
Sbjct: 1066 DWEIKQLDVNNAFLQGTLTEEVYMAQPPGFIDKDRPTHVCRLRKAIYGLKQAPRAWYMEL 1125

Query: 154  NDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDIIFTCNHQGAID 11
              +L    F NS+S ASLFIY HG T +Y+ VYVDDII T + + +ID
Sbjct: 1126 KQHLFNIGFVNSLSDASLFIYCHGTTFVYVLVYVDDIIVTGSDKSSID 1173


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  191 bits (484), Expect = 4e-46
 Identities = 124/273 (45%), Positives = 156/273 (57%), Gaps = 7/273 (2%)
 Frame = -2

Query: 826 PNHNLHLPPTQPRLYRNHYPTPHTHAATIITYS*SRHNYSLKK*HNGTHPKT*PCN-PTL 650
           P H L  P  QP        TP  H + + T + +     ++K +  TH  + P + PT 
Sbjct: 85  PPHQLG-PTLQPEPASQQVSTPAPHHS-MTTRAKNHITKPIQKLNLHTHLASFPSSEPTS 142

Query: 649 LSHIIQYHYQALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGC-----IRSN 488
           ++       QALKD +W  AM +E+DA   N TW+LVS   I  L    GC     I+ N
Sbjct: 143 VA-------QALKDSNWCKAMSEEYDALVRNGTWELVSPTGITNL---VGCKWVFRIKRN 192

Query: 487 IFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDI 308
                  ID   AC V KGFH RP +DY ETFSPV+   TM +VLS AV+ GW L++LD+
Sbjct: 193 ---SDGSIDRFKACLVAKGFHQRPGVDYLETFSPVIKPTTMILVLSIAVSNGWSLRQLDV 249

Query: 307 NNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEF 128
           NNAFLQGT+ E VYM QP G +D    TH C+L KA+YG KQAPRT Y EL  +L+   F
Sbjct: 250 NNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIYGLKQAPRTWYHELCQFLVDFGF 309

Query: 127 QNSISYASLFIYRHGLTLIYLFVYVDDIIFTCN 29
           +NS S  SLF+   G  L+YL VYVDDII T N
Sbjct: 310 KNSHSDTSLFVLHAGTNLLYLLVYVDDIIITGN 342


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  189 bits (480), Expect = 1e-45
 Identities = 124/295 (42%), Positives = 163/295 (55%), Gaps = 3/295 (1%)
 Frame = -2

Query: 883  PQRPHASPMPYTSLMGRLKPNHNLHLPPTQ--PRLYRNHYPTPHTHAATIITYS*SRHNY 710
            P    ++P+P T    +    +N  LPPTQ  P    +  P+PH     I+T S    + 
Sbjct: 549  PDSHSSAPVPET----KCDCANNPPLPPTQNDPNQPPDLSPSPHV----IVTRSKHNIHK 600

Query: 709  SLKK*HNGTHPKT*PCNPTLLSHIIQYHYQALKDPDWRAAMQKEFDAR-SNHTWDLVSTR 533
             ++K +     +     PT ++       QALKDP WR AM  EFDA   N TWDLV + 
Sbjct: 601  PIQKXNLTAXLQQPTLEPTTVT-------QALKDPKWRQAMSAEFDALLRNGTWDLVPSH 653

Query: 532  LIKIL*DASGCIRSNIFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSPVVITVTMRIVL 353
              + L       R+  +L    ID   A  V KGFH  P   Y+ETFSPV+   T+R+VL
Sbjct: 654  PXQNLXGCKWIFRTK-YLPNGSIDRYKARLVAKGFHQXPGXXYSETFSPVIKPTTVRLVL 712

Query: 352  SFAVTKGWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKKALYGFKQAPR 173
            S AV +GW L++LD NN FLQGTL ED +M QP G +D     H C+L+KA+YG KQAPR
Sbjct: 713  SLAVXQGWSLRQLDXNNXFLQGTLTEDXFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPR 772

Query: 172  TLYSELNDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDIIFTCNHQGAIDT 8
              Y EL  +L+Q  F NSI   SLFI+ +  T++YL V+VDDII T N+  A  T
Sbjct: 773  AWYHELRQFLLQFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNNVEAAQT 827


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  178 bits (452), Expect(2) = 2e-45
 Identities = 98/197 (49%), Positives = 124/197 (62%), Gaps = 1/197 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QALKDP WR AM +E+DA   N TW+LV +   + +       R+        ID   A 
Sbjct: 661  QALKDPKWRKAMSEEYDALVRNGTWELVPSNPSQNVVGCKWIFRTKRNSDGS-IDRFKAR 719

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KGFH RPD+DY +TFSPVV   T+ +VLS AV+ GW L++LD+NN FLQGTL E VY
Sbjct: 720  LVAKGFHQRPDIDYYDTFSPVVKPTTIMLVLSVAVSNGWILRQLDVNNVFLQGTLTEHVY 779

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G +D    +H C+LKKA+YG KQAPR  Y EL  +L+Q  F NS +  SLF+ + 
Sbjct: 780  MTQPPGFIDQDSPSHVCKLKKAIYGLKQAPRAWYQELRSFLLQFGFTNSHADTSLFVLKF 839

Query: 85   GLTLIYLFVYVDDIIFT 35
               L+Y  VYVDD+I T
Sbjct: 840  RGHLVYFLVYVDDLIIT 856



 Score = 31.6 bits (70), Expect(2) = 2e-45
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 726 NRGIITRSRNDIMEPIQKLSLVTRLSSP 643
           N  + TR++N+I +PIQKL+L  +LS P
Sbjct: 624 NHSMQTRAKNNIRKPIQKLNLHIQLSKP 651


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  183 bits (465), Expect = 7e-44
 Identities = 126/296 (42%), Positives = 166/296 (56%), Gaps = 7/296 (2%)
 Frame = -2

Query: 874  PHASPMPYTSLMGRLKPNHNLHLPPTQPRLYRNHYPTPHTHAATIITYS*SRHNYSLKK* 695
            P A+P P+ +     +P+    L  T+P +     P P  H  T  T + +     ++K 
Sbjct: 779  PPAAPFPHQASSAP-QPSPQPSLTTTEPPI---PVPPPTQHRMT--TRAKNNITKPIQKL 832

Query: 694  HNGTH-PKT*PCNPTLLSHIIQYHYQALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKI 521
            +  TH P      PT +S       QALKD +WR AM  E+DA   N TW+LV    I  
Sbjct: 833  NLHTHKPTFQTTTPTSIS-------QALKDQNWRQAMSDEYDALVRNGTWELVPPEDITN 885

Query: 520  L*DASGC-----IRSNIFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSPVVITVTMRIV 356
            L    GC     I+ N       ID   A  V KGFH RP +DY+ETFSPVV   T+R+V
Sbjct: 886  L---VGCKWIFRIKRN---SDGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLV 939

Query: 355  LSFAVTKGWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKKALYGFKQAP 176
            LS AV+ GW L++LD+NNAFLQG L E+V+M QP G VD+   ++ C+L KA+YG KQAP
Sbjct: 940  LSIAVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSDHPSYVCKLHKAIYGLKQAP 999

Query: 175  RTLYSELNDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDIIFTCNHQGAIDT 8
            R  Y EL  +L+ + F+NS S  SLF+ R    ++YL VYVDDII T    G+ DT
Sbjct: 1000 RAWYHELRQFLLTSGFKNSHSDTSLFVLRSSNHVVYLLVYVDDIILT----GSSDT 1051


>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
          Length = 807

 Score =  176 bits (447), Expect(2) = 9e-44
 Identities = 100/206 (48%), Positives = 126/206 (61%), Gaps = 3/206 (1%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASG--CIRSNIFLMAPFIDIKL 452
            Q LKD +WR A+ +E+DA   N TW+LVS   I  L       CI+ N       I+   
Sbjct: 393  QVLKDSNWRKAISEEYDALVRNGTWELVSPTGITNLVGCKWVFCIKRN---SDGSIERFK 449

Query: 451  ACFVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHED 272
            A  V KGFH RP +DY ETF+PV+   T+R+VLS A++ GW L +LD+NNAFLQ TL E 
Sbjct: 450  ARLVAKGFHQRPGVDYLETFNPVIKPTTVRLVLSIAISNGWSLHQLDVNNAFLQSTLSET 509

Query: 271  VYMVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIY 92
            VYM Q  G +D    TH C+L KA+YG KQA R  Y EL  +L+ + F+NS S  SLFI 
Sbjct: 510  VYMAQFPGFIDADKPTHVCKLHKAIYGLKQASRAWYHELRQFLVDSGFKNSHSNTSLFIL 569

Query: 91   RHGLTLIYLFVYVDDIIFTCNHQGAI 14
              G  L+YL VYVDDII T N+   +
Sbjct: 570  HAGTNLLYLLVYVDDIIITGNNNDLV 595



 Score = 28.1 bits (61), Expect(2) = 9e-44
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 711 TRSRNDIMEPIQKLSLVTRLSS 646
           TR++N I +PIQKL++ T L+S
Sbjct: 361 TRAKNHITKPIQKLNIHTHLAS 382


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  182 bits (461), Expect = 2e-43
 Identities = 120/290 (41%), Positives = 161/290 (55%), Gaps = 5/290 (1%)
 Frame = -2

Query: 895  NSRCPQRPHASPMPYTSLMGRLKPNHNLHLPPTQPRLYRNHYPTPHTHAATIITYS*SRH 716
            NS  P  P  S   ++     L  N  L  PP      +N +P   T A   IT   ++ 
Sbjct: 855  NSTPPTSPTTSVHQHSPTPSPLPQNPPLPPPP------QNDHPM-RTRAKNQITKPKTKF 907

Query: 715  NYSLKK*HNGTHPKT*PCNPTLLSHIIQYHYQALKDPDWRAAMQKEFDAR-SNHTWDLVS 539
            N +       T  K  P  PT ++       QALKDP+WR AM +E +A+  NHTWDLVS
Sbjct: 908  NLTTSL----TSSK--PTIPTTVA-------QALKDPNWRNAMSEEINAQMKNHTWDLVS 954

Query: 538  TRLIKIL*DASGCIRSNIFLMAPFIDIKLACF----VEKGFH*RPDLDYNETFSPVVITV 371
                K +          IF +   +D  +A +    V +GF+ +  +DY+ETFSPV+ + 
Sbjct: 955  PEEAKHVISCKW-----IFTLKYNVDGSIARYKARLVARGFNQQYGIDYSETFSPVIKST 1009

Query: 370  TMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLKKALYG 191
            T+R VL  AV + W + ++DINNAFLQGTL+E+VY+ QP G +D    +H CRL KALYG
Sbjct: 1010 TIRTVLEVAVKRNWSIHQVDINNAFLQGTLNEEVYVSQPPGFIDRDRPSHVCRLNKALYG 1069

Query: 190  FKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDII 41
             KQAPR  Y EL  +L+Q  F NS++ ASLFIY    T +Y+ VYVDDII
Sbjct: 1070 LKQAPRAWYQELRRFLLQAGFVNSLADASLFIYNRHNTFMYVLVYVDDII 1119


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score =  180 bits (456), Expect = 7e-43
 Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QALKD  WR AM  E +A+  NHTWDLV      +       I +  +     ++   A 
Sbjct: 926  QALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKAR 985

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
            FV KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL +DVY
Sbjct: 986  FVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVY 1045

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G +D     + C+L+KALYG KQAPR  Y EL +YL+   F NS+S  SLF+ + 
Sbjct: 1046 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1105

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G +++Y+ VYVDDI+ T N
Sbjct: 1106 GKSIVYMLVYVDDILITGN 1124


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
            gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score =  180 bits (456), Expect = 7e-43
 Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QALKD  WR AM  E +A+  NHTWDLV      +       I +  +     ++   A 
Sbjct: 961  QALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKAR 1020

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
            FV KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL +DVY
Sbjct: 1021 FVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVY 1080

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G +D     + C+L+KALYG KQAPR  Y EL +YL+   F NS+S  SLF+ + 
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G +++Y+ VYVDDI+ T N
Sbjct: 1141 GKSIVYMLVYVDDILITGN 1159


>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  179 bits (453), Expect = 2e-42
 Identities = 97/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRLKKA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLKKAIYGLKQAPRAWYVELQTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  178 bits (451), Expect = 3e-42
 Identities = 96/199 (48%), Positives = 127/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD +   + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKNRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score =  177 bits (450), Expect = 4e-42
 Identities = 94/199 (47%), Positives = 127/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QALKD  WR AM  E +A+  NHTWDLV      +       I +  +     ++   A 
Sbjct: 961  QALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKAR 1020

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL +DVY
Sbjct: 1021 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVY 1080

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G +D     + C+L+KALYG KQAPR  Y EL +YL+   F NS+S  SLF+ + 
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G +++Y+ VYVDDI+ T N
Sbjct: 1141 GKSIVYMLVYVDDILITGN 1159


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 818  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 877

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 878  LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 937

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 938  MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 997

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 998  GRSIIYMLVYVDDILITGN 1016


>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
            polyprotein [Arabidopsis thaliana]
            gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
            thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
            [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score =  177 bits (450), Expect = 4e-42
 Identities = 113/299 (37%), Positives = 156/299 (52%), Gaps = 15/299 (5%)
 Frame = -2

Query: 880  QRPHASPMPYTSLMGR----LKPNHNLHLPPTQPRLYRNHYPTP-HTHAATIITYS*SRH 716
            Q   +SP P TS          P+  +H PP   ++  N+   P +TH+           
Sbjct: 861  QSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPINTHSM---------- 910

Query: 715  NYSLKK*HNGTHPKT*PCNPTLLSHII---------QYHYQALKDPDWRAAMQKEFDAR- 566
                     GT  K     P L   +          +   QALKD  WR AM  E +A+ 
Sbjct: 911  ---------GTRAKAGIIKPNLKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQI 961

Query: 565  SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLACFVEKGFH*RPDLDYNETFSP 386
             NHTWDLV      +       I +  +     ++   A  V KG++ RP LDY ETFSP
Sbjct: 962  GNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYVETFSP 1021

Query: 385  VVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVYMVQPFGSVDTSLLTHACRLK 206
            V+ + ++RIVL  AV + W +++LD+NNAFLQGTL +DVYM QP G +D     + C+L+
Sbjct: 1022 VIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLR 1081

Query: 205  KALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRHGLTLIYLFVYVDDIIFTCN 29
            KALYG KQAPR  Y EL +YL+   F NS+S  SLF+ + G +++Y+ VYVDDI+ T N
Sbjct: 1082 KALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGN 1140


>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
 Frame = -2

Query: 622  QALKDPDWRAAMQKEFDAR-SNHTWDLVSTRLIKIL*DASGCIRSNIFLMAPFIDIKLAC 446
            QA+KD  WR AM  E +A+  NHTWDLV      +       I +  F     ++   A 
Sbjct: 963  QAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKAR 1022

Query: 445  FVEKGFH*RPDLDYNETFSPVVITVTMRIVLSFAVTKGWKLKKLDINNAFLQGTLHEDVY 266
             V KG++ RP LDY ETFSPV+ + ++RIVL  AV + W +++LD+NNAFLQGTL ++VY
Sbjct: 1023 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVY 1082

Query: 265  MVQPFGSVDTSLLTHACRLKKALYGFKQAPRTLYSELNDYLIQTEFQNSISYASLFIYRH 86
            M QP G VD     + CRL+KA+YG KQAPR  Y EL  YL+   F NSIS  SLF+ + 
Sbjct: 1083 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1142

Query: 85   GLTLIYLFVYVDDIIFTCN 29
            G ++IY+ VYVDDI+ T N
Sbjct: 1143 GRSIIYMLVYVDDILITGN 1161