BLASTX nr result

ID: Rheum21_contig00016782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016782
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74398.1| hypothetical protein M569_00361, partial [Genlise...    67   2e-09
ref|YP_001152105.1| ORF66a [Pinus koraiensis] gi|145048732|gb|AB...    56   6e-06

>gb|EPS74398.1| hypothetical protein M569_00361, partial [Genlisea aurea]
          Length = 56

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -1

Query: 220 RDVAQLGSAFVLGTKCHGFKSCHPYLLLFL*EVKRN*LRS 101
           RDVAQLGSAFVLGTKCHGFKSCHPYLLL    V +N +RS
Sbjct: 1   RDVAQLGSAFVLGTKCHGFKSCHPYLLLLKRAVSQNKVRS 40


>ref|YP_001152105.1| ORF66a [Pinus koraiensis] gi|145048732|gb|ABP35351.1| ORF66a [Pinus
           koraiensis]
          Length = 66

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 226 IKRDVAQLGSAFVLGTKCHGFKSCHPYLLL 137
           I+RDVAQLGS FVLGTKC  FKSCHPYL L
Sbjct: 2   IRRDVAQLGSVFVLGTKCRRFKSCHPYLSL 31


Top