BLASTX nr result

ID: Rheum21_contig00016472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016472
         (221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD45250.1| seed lectin [Hernandia moerenhoutiana subsp. samo...    64   2e-08
gb|AAA33345.1| lectin, partial [Galanthus nivalis]                     57   2e-06
gb|ABC72741.1| mannose-specific lectin [Chimonanthus praecox]          56   4e-06
gb|AAA33349.1| , partial [Galanthus nivalis]                  56   6e-06

>gb|AAD45250.1| seed lectin [Hernandia moerenhoutiana subsp. samoensis]
          Length = 133

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = +3

Query: 12  GNLVIYTPAGVSIWRTTAPRLTHRNYVFILQKDRNLAIYGPGVWDARSNVRGVG 173
           GN V Y P+G  IW +   +    NY+ ILQ DRN+ IYGP +W  R+NVRG G
Sbjct: 46  GNFVAYNPSGKPIWASNTGQGGSNNYILILQNDRNVVIYGPALWSTRTNVRGQG 99


>gb|AAA33345.1| lectin, partial [Galanthus nivalis]
          Length = 161

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +3

Query: 12  GNLVIYTPAGVSIWRTTAPRLTHRNYVFILQKDRNLAIYGPGVWDARSNVRGVG 173
           GNLV+Y P+   IW +      + NYV ILQKD N+AIYGP +W   +N+ G G
Sbjct: 82  GNLVVYNPSNKPIWASNTGG-QNGNYVCILQKDGNIAIYGPAIWATGTNIHGAG 134


>gb|ABC72741.1| mannose-specific lectin [Chimonanthus praecox]
          Length = 185

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/54 (44%), Positives = 33/54 (61%)
 Frame = +3

Query: 12  GNLVIYTPAGVSIWRTTAPRLTHRNYVFILQKDRNLAIYGPGVWDARSNVRGVG 173
           GN V+Y+  G +IW +   +    +YV +LQ DRNL IYGP  W   +N+RG G
Sbjct: 97  GNFVLYSSQGSAIWSSKTWQGGSSHYVLVLQNDRNLVIYGPSRWATETNIRGTG 150


>gb|AAA33349.1| , partial [Galanthus nivalis]
          Length = 159

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/54 (48%), Positives = 33/54 (61%)
 Frame = +3

Query: 12  GNLVIYTPAGVSIWRTTAPRLTHRNYVFILQKDRNLAIYGPGVWDARSNVRGVG 173
           GNLV+Y P+   IW +      + NYV ILQKDRN+ IYGP  W   +N+ G G
Sbjct: 80  GNLVVYNPSNKPIWASNTGG-QNGNYVCILQKDRNVVIYGPARWATGTNIHGAG 132


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