BLASTX nr result
ID: Rheum21_contig00016411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016411
(1650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ... 120 1e-24
ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac... 115 4e-23
ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc... 113 2e-22
ref|XP_006364254.1| PREDICTED: NADH-ubiquinone oxidoreductase ch... 109 3e-21
gb|EXC33548.1| putative mitochondrial protein [Morus notabilis] 109 4e-21
ref|XP_002535002.1| NADH dehydrogenase, putative [Ricinus commun... 108 7e-21
ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulg... 102 6e-20
ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medica... 102 4e-19
ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medica... 102 4e-19
ref|YP_008999604.1| NADH dehydrogenase subunit 1 (mitochondrion)... 100 1e-18
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 100 1e-18
ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase ch... 100 1e-18
emb|CAN61460.1| hypothetical protein VITISV_029799 [Vitis vinifera] 95 2e-18
ref|XP_003613731.1| NADH-ubiquinone oxidoreductase chain [Medica... 100 3e-18
ref|NP_064013.1| orf117 gene product (mitochondrion) [Beta vulga... 89 4e-16
ref|XP_002535294.1| NADH dehydrogenase, putative [Ricinus commun... 92 9e-16
emb|CAA27743.1| URF-1 [Citrullus lanatus] 79 8e-13
ref|YP_008992266.1| NADH dehydrogenase subunit 1 (mitochondrion)... 79 4e-12
sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreduct... 75 7e-12
ref|YP_005090403.1| nad1 gene product (mitochondrion) [Boea hygr... 75 6e-11
>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
gi|355477332|gb|AES58535.1| hypothetical protein
MTR_1g005250 [Medicago truncatula]
Length = 197
Score = 120 bits (302), Expect = 1e-24
Identities = 64/89 (71%), Positives = 69/89 (77%)
Frame = -1
Query: 894 YCSMEAGGLLLIVIRPGFFGVVGEGLTFLTHIQSYRHGPTDLFSIRASSSATRFYLTKPR 715
Y SMEAGGLL +RPGFFGVVGEGLTFLTHI SYRHGPTDLFSI ASSSATRFYLTKPR
Sbjct: 111 YFSMEAGGLL--EVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSATRFYLTKPR 168
Query: 714 ARLRREFYLTTFLITRRRESTRHSLVSNE 628
AR RREF L L + E+ + +S E
Sbjct: 169 ARPRREFALPNSLFDNKAETPDPTFISFE 197
Score = 115 bits (288), Expect = 6e-23
Identities = 86/194 (44%), Positives = 100/194 (51%), Gaps = 2/194 (1%)
Frame = -3
Query: 1207 PLVDFVRKEKVGFESSLISTPSVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-K 1031
P V +V VG SLISTP VL+RSGPWSSVSGLPADKISEIDQPAGLVWLF SIE K
Sbjct: 26 PPVAYVVVSGVG---SLISTPPVLIRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKK 82
Query: 1030 ESAVCASHLLLGSAGRHGILVQI*AGRTCDGSQGSNMTT*VYVATILFYG-SGRAVIDCY 854
ESAVC AGRTCDGS SN+ + + ++ +++
Sbjct: 83 ESAVC-------------------AGRTCDGSPRSNIYDHLGLRCHDYFSMEAGGLLEVR 123
Query: 853 SARFFWCRRGGIDLSNAYSVVPAWPH*FVFDQSIKQRNPVLLD*APCSFKEGVLPNYLFD 674
F G L++ +S F S L +E LPN LFD
Sbjct: 124 PGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSATRFYLTKPRARPRREFALPNSLFD 183
Query: 673 NKATRVDPTFISFE 632
NKA DPTFISFE
Sbjct: 184 NKAETPDPTFISFE 197
Score = 64.3 bits (155), Expect = 1e-07
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -1
Query: 1506 MAFSDRGSLLQAPPNLYKVLLAFSQPLVAYVVV 1408
MAFSDRGSLLQAPPNLYKVLLAFSQP VAYVVV
Sbjct: 1 MAFSDRGSLLQAPPNLYKVLLAFSQPPVAYVVV 33
>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
gi|56806565|dbj|BAD83466.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 142
Score = 115 bits (289), Expect = 4e-23
Identities = 59/67 (88%), Positives = 61/67 (91%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPTAKSK 180
NRAPFDLPEAEAE VAGYNVEYARDAILNSSLLAEANVPGSRGLILTE GGSLPT+K
Sbjct: 73 NRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSRGLILTETRGGSLPTSKYS 132
Query: 181 ILGKQKR 201
ILGK K+
Sbjct: 133 ILGKPKK 139
>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
[Medicago truncatula]
Length = 187
Score = 113 bits (283), Expect = 2e-22
Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Frame = -3
Query: 1162 SLISTPSVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLLGSAG 986
SLISTP VL+RSGPWSSVSG PADKISEIDQPAGLVWLF SIE KESAVCASHLLLGSAG
Sbjct: 20 SLISTPPVLIRSGPWSSVSGFPADKISEIDQPAGLVWLFLSIEKKESAVCASHLLLGSAG 79
Query: 985 RHGIL 971
RH +
Sbjct: 80 RHAFV 84
>ref|XP_006364254.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like [Solanum
tuberosum]
Length = 137
Score = 109 bits (273), Expect = 3e-21
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPTAKSK 180
NRAPFDLPEAEAE VA YN+EYARDAILNSSLLA+ANVPGSRGLILTE GGSLPT+K
Sbjct: 73 NRAPFDLPEAEAESVASYNIEYARDAILNSSLLAKANVPGSRGLILTETRGGSLPTSKYS 132
Query: 181 ILGKQ 195
ILGK+
Sbjct: 133 ILGKR 137
>gb|EXC33548.1| putative mitochondrial protein [Morus notabilis]
Length = 478
Score = 109 bits (272), Expect = 4e-21
Identities = 58/82 (70%), Positives = 63/82 (76%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPTAKSK 180
NRAPFDLPEAE E VAGYNVEYARDAILNS LLAEANVPGS GLILTE GGSLPT+K
Sbjct: 370 NRAPFDLPEAEVESVAGYNVEYARDAILNSPLLAEANVPGSWGLILTETRGGSLPTSKYS 429
Query: 181 ILGKQKR*APSANLIENSRQAL 246
ILGK K + S + ++ L
Sbjct: 430 ILGKPKNVSASTRALLKLKRPL 451
>ref|XP_002535002.1| NADH dehydrogenase, putative [Ricinus communis]
gi|255613501|ref|XP_002539515.1| NADH dehydrogenase,
putative [Ricinus communis]
gi|255620598|ref|XP_002540128.1| NADH dehydrogenase,
putative [Ricinus communis] gi|223498958|gb|EEF22256.1|
NADH dehydrogenase, putative [Ricinus communis]
gi|223505441|gb|EEF22869.1| NADH dehydrogenase, putative
[Ricinus communis] gi|223524216|gb|EEF27384.1| NADH
dehydrogenase, putative [Ricinus communis]
Length = 97
Score = 108 bits (270), Expect = 7e-21
Identities = 56/66 (84%), Positives = 57/66 (86%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPTAKSK 180
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLP +K
Sbjct: 28 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPISKKF 87
Query: 181 ILGKQK 198
LGK K
Sbjct: 88 YLGKPK 93
>ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulgaris subsp. maritima]
gi|346683233|ref|YP_004842165.1| hypothetical protein
BemaM_p121 [Beta macrocarpa]
gi|317905592|emb|CBX33215.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439875|emb|CBX33310.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148029|emb|CBJ20693.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500151|emb|CBX24970.1|
hypothetical protein [Beta macrocarpa]
gi|384977923|emb|CBL54147.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 133
Score = 102 bits (254), Expect(2) = 6e-20
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGG 156
NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTE GGG
Sbjct: 73 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTETGGG 124
Score = 23.9 bits (50), Expect(2) = 6e-20
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 149 GVGLYQLQNRRF 184
G GLYQLQN RF
Sbjct: 122 GGGLYQLQNSRF 133
>ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477340|gb|AES58543.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 335
Score = 102 bits (255), Expect = 4e-19
Identities = 52/56 (92%), Positives = 52/56 (92%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPT 168
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLPT
Sbjct: 280 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPT 335
>ref|XP_003588285.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477333|gb|AES58536.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
gi|442803233|gb|AGC78968.1| hypothetical protein
(mitochondrion) [Vicia faba] gi|442803260|gb|AGC78995.1|
hypothetical protein (mitochondrion) [Vicia faba]
Length = 128
Score = 102 bits (255), Expect = 4e-19
Identities = 52/56 (92%), Positives = 52/56 (92%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPT 168
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLPT
Sbjct: 73 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPT 128
>ref|YP_008999604.1| NADH dehydrogenase subunit 1 (mitochondrion) [Vaccinium
macrocarpon] gi|549531678|gb|AGX28817.1| NADH
dehydrogenase subunit 1 (mitochondrion) [Vaccinium
macrocarpon]
Length = 329
Score = 100 bits (250), Expect = 1e-18
Identities = 53/64 (82%), Positives = 53/64 (82%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPTAKSK 180
NRAPFDLPEAEAE VAGYNVEYARDAILNSSLLAEANVPGSRGLILTE GG LP
Sbjct: 203 NRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSRGLILTETRGGWLPILDLS 262
Query: 181 ILGK 192
I K
Sbjct: 263 IFKK 266
>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 1-like [Cucumis sativus]
Length = 166
Score = 100 bits (250), Expect = 1e-18
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLP 165
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLP
Sbjct: 74 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 128
>ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like, partial
[Cucumis sativus] gi|449472154|ref|XP_004153510.1|
PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
partial [Cucumis sativus]
gi|449473509|ref|XP_004153902.1| PREDICTED:
NADH-ubiquinone oxidoreductase chain 1-like, partial
[Cucumis sativus] gi|449529808|ref|XP_004171890.1|
PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
partial [Cucumis sativus]
Length = 135
Score = 100 bits (250), Expect = 1e-18
Identities = 51/55 (92%), Positives = 51/55 (92%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLP 165
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLP
Sbjct: 74 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLP 128
>emb|CAN61460.1| hypothetical protein VITISV_029799 [Vitis vinifera]
Length = 143
Score = 95.1 bits (235), Expect(2) = 2e-18
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSL 162
NRAPFDLPEAEAE VAGYNVEYARDAILNSSLLAEANVPGSRGLILTE G L
Sbjct: 82 NRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPGSRGLILTETRGVGL 135
Score = 25.8 bits (55), Expect(2) = 2e-18
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 149 GVGLYQLQNRRF 184
GVGLYQLQN RF
Sbjct: 132 GVGLYQLQNIRF 143
>ref|XP_003613731.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355515066|gb|AES96689.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 95
Score = 99.8 bits (247), Expect = 3e-18
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGGSLPT 168
NRA FDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE GGSLPT
Sbjct: 28 NRASFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGGSLPT 83
>ref|NP_064013.1| orf117 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|9049314|dbj|BAA99324.1| orf117 [Beta vulgaris subsp.
vulgaris]
Length = 117
Score = 89.4 bits (220), Expect(2) = 4e-16
Identities = 47/52 (90%), Positives = 47/52 (90%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTERGGG 156
NRAPFDLPEAE ELVAGYNVEYARDAILNSSLLAEAN PG GLILTE GGG
Sbjct: 58 NRAPFDLPEAERELVAGYNVEYARDAILNSSLLAEAN-PGVPGLILTETGGG 108
Score = 23.9 bits (50), Expect(2) = 4e-16
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 149 GVGLYQLQNRRF 184
G GLYQLQN RF
Sbjct: 106 GGGLYQLQNSRF 117
>ref|XP_002535294.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223523524|gb|EEF27088.1| NADH dehydrogenase, putative
[Ricinus communis]
Length = 77
Score = 91.7 bits (226), Expect = 9e-16
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRGLILTE 144
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPGSRGLILTE
Sbjct: 28 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTE 75
>emb|CAA27743.1| URF-1 [Citrullus lanatus]
Length = 316
Score = 78.6 bits (192), Expect(2) = 8e-13
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRG 129
NRAPFDLPEAEAE VAGYNVEYARDAILNS LLAEANVPG G
Sbjct: 175 NRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGXPG 217
Score = 23.5 bits (49), Expect(2) = 8e-13
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 114 PGVPGTHSD*K 146
PG PGTHSD K
Sbjct: 213 PGXPGTHSDNK 223
>ref|YP_008992266.1| NADH dehydrogenase subunit 1 (mitochondrion) [Salvia miltiorrhiza]
gi|534292375|gb|AGU16667.1| NADH dehydrogenase subunit 1
(mitochondrion) [Salvia miltiorrhiza]
Length = 322
Score = 79.3 bits (194), Expect = 4e-12
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPG 120
NRAPFDLPEAEAE VAGYNVEYARDAILNSSLLAEANVPG
Sbjct: 199 NRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVPG 238
>sp|P08834.1|NU1M_CITLA RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName:
Full=NADH dehydrogenase subunit 1
Length = 316
Score = 75.5 bits (184), Expect(2) = 7e-12
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPGSRG 129
NRAPFDLPEAEAE VAGYNVEYA DAILNS LLAEANVPG G
Sbjct: 175 NRAPFDLPEAEAESVAGYNVEYAWDAILNSPLLAEANVPGXPG 217
Score = 23.5 bits (49), Expect(2) = 7e-12
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 114 PGVPGTHSD*K 146
PG PGTHSD K
Sbjct: 213 PGXPGTHSDNK 223
>ref|YP_005090403.1| nad1 gene product (mitochondrion) [Boea hygrometrica]
gi|340549475|gb|AEK53296.1| NADH dehydrogenase subunit 1
(mitochondrion) [Boea hygrometrica]
Length = 322
Score = 75.5 bits (184), Expect = 6e-11
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +1
Query: 1 NRAPFDLPEAEAELVAGYNVEYARDAILNSSLLAEANVPG 120
NRAPFDLPEAEAE VAGYNVEYARDAILNSSLLAEANV G
Sbjct: 199 NRAPFDLPEAEAESVAGYNVEYARDAILNSSLLAEANVLG 238