BLASTX nr result

ID: Rheum21_contig00016378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016378
         (732 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY33691.1| PHD finger transcription factor, putative [Theobr...    64   7e-08
ref|XP_006364450.1| PREDICTED: uncharacterized protein LOC102602...    57   8e-06
ref|XP_006364449.1| PREDICTED: uncharacterized protein LOC102602...    57   8e-06

>gb|EOY33691.1| PHD finger transcription factor, putative [Theobroma cacao]
          Length = 1274

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
 Frame = +3

Query: 3    QGTVMCQKLLGAPVLTQSSLSRDSLYELPEVVDKGEENIELDCKSAISEVYHLMKIESSD 182
            QG +MCQKLL    L +S+LS  S +EL     +  +N++LD  SA+SEV+   +IE + 
Sbjct: 1142 QGAIMCQKLLLKRPLVESNLSIGSQFELYNDAIESSDNVDLDGSSAVSEVFQAGQIEDNG 1201

Query: 183  SFDQGPLDIPEDNDNSGCKDPPSDAMVIPPS--DQQPSTTENTCEFSENQNQSVVESN-- 350
              DQG ++I E    SG K      +V  P+  D +P      C+   N   SVV++N  
Sbjct: 1202 FIDQGLVEI-EAGGGSGNKGDCVHIVVNQPTQIDHEP------CDTEANPECSVVDTNYK 1254

Query: 351  --ACKYKGEMKQYSRKK 395
               C     ++ Y R++
Sbjct: 1255 KRKCSGSDSIRCYKRRR 1271


>ref|XP_006364450.1| PREDICTED: uncharacterized protein LOC102602469 isoform X2 [Solanum
            tuberosum]
          Length = 973

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
 Frame = +3

Query: 3    QGTVMCQKLLGAPVLTQSSLSRDSLYELPEVVDKGEENIELDCKSAISEVYHLMKIESSD 182
            QGTVMCQKLL    +     S  ++Y+      K +E +ELD  SA+SEV+   +IE S+
Sbjct: 841  QGTVMCQKLLQN--IPPEVSSESTVYQTQLDHIKSKETVELDGNSALSEVFQAEQIEGSE 898

Query: 183  SFDQGPLDIPEDNDNSGCKDPPSDA---MVIPPSDQQPSTTENTCEFSENQNQSVVESNA 353
              DQG  D P      GC++  +DA   ++   + Q P   ++  E S      V +S  
Sbjct: 899  IVDQGYADAP-----GGCENNDTDAPTPLINVANQQAPLGCQD--ETSLQYQAEVTDSKV 951

Query: 354  CKYKG--EMKQYSRKKPL 401
             +  G  + K Y R+K +
Sbjct: 952  LEKTGVVQYKCYKRRKKI 969


>ref|XP_006364449.1| PREDICTED: uncharacterized protein LOC102602469 isoform X1 [Solanum
            tuberosum]
          Length = 974

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
 Frame = +3

Query: 3    QGTVMCQKLLGAPVLTQSSLSRDSLYELPEVVDKGEENIELDCKSAISEVYHLMKIESSD 182
            QGTVMCQKLL   +  + S     +Y+      K +E +ELD  SA+SEV+   +IE S+
Sbjct: 841  QGTVMCQKLL-QNIPPEVSSESTEVYQTQLDHIKSKETVELDGNSALSEVFQAEQIEGSE 899

Query: 183  SFDQGPLDIPEDNDNSGCKDPPSDA---MVIPPSDQQPSTTENTCEFSENQNQSVVESNA 353
              DQG  D P      GC++  +DA   ++   + Q P   ++  E S      V +S  
Sbjct: 900  IVDQGYADAP-----GGCENNDTDAPTPLINVANQQAPLGCQD--ETSLQYQAEVTDSKV 952

Query: 354  CKYKG--EMKQYSRKKPL 401
             +  G  + K Y R+K +
Sbjct: 953  LEKTGVVQYKCYKRRKKI 970


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