BLASTX nr result

ID: Rheum21_contig00016356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00016356
         (1721 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]                               606   e-171
gb|EOY09997.1| Pentatricopeptide repeat-containing protein, puta...   586   e-164
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   582   e-163
gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]     578   e-162
ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...   569   e-159
ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citr...   568   e-159
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   548   e-153
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi...   546   e-152
gb|EOY09998.1| Pentatricopeptide repeat-containing protein, puta...   541   e-151
gb|EOY09999.1| Pentatricopeptide repeat-containing protein, puta...   535   e-149
ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containi...   529   e-147
gb|EMJ19196.1| hypothetical protein PRUPE_ppa005672mg [Prunus pe...   526   e-146
emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]   523   e-145
gb|EOY10000.1| Pentatricopeptide repeat-containing protein, puta...   504   e-140
ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containi...   502   e-139
ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group] g...   495   e-137
ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containi...   493   e-136
ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-133
ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [S...   481   e-133

>dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
          Length = 517

 Score =  606 bits (1563), Expect = e-171
 Identities = 299/503 (59%), Positives = 381/503 (75%), Gaps = 1/503 (0%)
 Frame = +2

Query: 89   PCNHPISLFLSYSPKTSDNPRRTAILHCA-YPLQQHVTHQSCGAEKAGSFSDHVNSPFGE 265
            P +  IS F  + PK ++ P   +I  C+ + + Q  T +S       +  +  N  F E
Sbjct: 21   PISFLISSFYPHFPKRTNKP---SIYTCSCFSIFQIGTTKSLE-----NLPNSYNKSFME 72

Query: 266  HPFGKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRT 445
            +P GKE+S E+YS  I+  CKKGYVDKAM  +SE++A+GL P L CY  LIE LGNVGRT
Sbjct: 73   YPIGKELSLEMYSEKISHYCKKGYVDKAMSCISEIQALGLCPNLFCYLCLIEGLGNVGRT 132

Query: 446  LEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETL 625
            LE E VFQEM+Y G+RP++ V                  R L+VM+++G  +++E  E  
Sbjct: 133  LEVEMVFQEMLYLGLRPNIVVFNVMLRGFLRKGLYKLANRALRVMEDLGMCKNQETLEIF 192

Query: 626  LDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGV 805
            LDYYV+  RLSDTW IIG M+++GY L+SF YSRVI LYRDNGMWKKAM +V E+ E+GV
Sbjct: 193  LDYYVSGRRLSDTWRIIGDMKRKGYQLNSFAYSRVIELYRDNGMWKKAMEIVGEISEMGV 252

Query: 806  PMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALG 985
            PMDR+IYNSIIDTFGKYG+L++AL+V VKM++E + PDI TWN LIKWHC  GD  +AL 
Sbjct: 253  PMDRRIYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALD 312

Query: 986  LFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYG 1165
            LF +MQ++GLYPDPKIF+ +IS+L   GKWDLLR++FEKMK++GH+ SGA+YAVLVDIYG
Sbjct: 313  LFTEMQDQGLYPDPKIFIILISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYG 372

Query: 1166 QYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLI 1345
            QYG+F  AE+CI AL+AEGV M  +I+ V+ANAYA QGLCE+TVKVL +ME EGIEPNLI
Sbjct: 373  QYGKFQGAEDCISALRAEGVQMSSNIYSVMANAYAQQGLCEETVKVLQVMEAEGIEPNLI 432

Query: 1346 MLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEM 1525
            MLN+LINAFGIAGRH EALSIY HIIE+GI+PD++TYTT+MKA +RAK+F+++PELYQ M
Sbjct: 433  MLNILINAFGIAGRHLEALSIYDHIIENGINPDIVTYTTLMKALIRAKKFTKVPELYQHM 492

Query: 1526 VSAGCSPDRKARELLNAAVMALE 1594
              AGC+PDRKARE+L  A+M L+
Sbjct: 493  ELAGCTPDRKAREMLQIALMHLQ 515


>gb|EOY09997.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao]
          Length = 513

 Score =  586 bits (1510), Expect = e-164
 Identities = 276/449 (61%), Positives = 360/449 (80%)
 Frame = +2

Query: 254  PFGEHPFGKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGN 433
            PFG +  G+E++SEL++  I   CK G VD AMKLV+ MEA+G  P  + Y  LIE+LG+
Sbjct: 65   PFGSNS-GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGS 123

Query: 434  VGRTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREI 613
            VGRTLEA+++FQEM+  G++P + +                  +VL VMDE G  +++E 
Sbjct: 124  VGRTLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQET 183

Query: 614  FETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMK 793
            +E LLDYYVNAGRL DTW ++ +M+++G  L+SFVYS++I LYRDNGMW+KA+G+V+E++
Sbjct: 184  YEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIR 243

Query: 794  ELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVN 973
            E G+ +DRQIYNSIIDTFGKYG+L +AL+VF KM++E ++PDITTWN LI+WHC  GD+ 
Sbjct: 244  EKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLT 303

Query: 974  RALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLV 1153
            +AL LF +MQE+GLYPDPKIF+++ISRL E GKWD+++++FE MK +GH+  GAIYA+LV
Sbjct: 304  KALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILV 363

Query: 1154 DIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIE 1333
            DIYGQYGRF DAE CI ALK+EG+     +FCVLANAYA QG CEQTVKVL IME EGIE
Sbjct: 364  DIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIE 423

Query: 1334 PNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPEL 1513
            PN++MLNVLINAFGIAGRH+EALSIYHHI +SGISPDVITY+T+MKAF+RAK+F ++PE+
Sbjct: 424  PNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEI 483

Query: 1514 YQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            Y+EM S+GC+PDRKAR++L  A+M LE R
Sbjct: 484  YREMESSGCTPDRKARQMLQTALMVLEQR 512


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  582 bits (1499), Expect = e-163
 Identities = 270/442 (61%), Positives = 361/442 (81%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G+E+S E Y++ I   CK G VDKAM L+++M+++G  P+ L YT LIE L +VGRTLEA
Sbjct: 16   GQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEA 75

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
            E+++QEM+ FG++P L +                  RVL+++D++G  R++E +E LLDY
Sbjct: 76   EALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDY 135

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
             VNAGRL DTW +I +M+++G+ L+SFVYS+VIGLYRDNGMWKKA+G+++E++E+G+P+D
Sbjct: 136  NVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLD 195

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
            + IYNSIIDTFGKYG+L++AL+V   MQ++G+ PDI TWN LI+WHC  G++++AL LF 
Sbjct: 196  KHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFS 255

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYG 1174
            +MQ +GLYPDPKI VT+ISRLAE+GKW+++R++F+ MK  G++ SGAIYA+LVDIYGQYG
Sbjct: 256  KMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYG 315

Query: 1175 RFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLN 1354
            RF DAEECI ALK+EG+     +FCVLANAYA QGLCEQTVKVL +ME EGIEPNLIMLN
Sbjct: 316  RFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLN 375

Query: 1355 VLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSA 1534
            VLINAFGIAGRH+EALSIYHH+ ESGISPDV+TY+T+MKA++RA++F ++PE+Y EM S+
Sbjct: 376  VLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESS 435

Query: 1535 GCSPDRKARELLNAAVMALEHR 1600
            GC+PD+KARE+L AA+M L  R
Sbjct: 436  GCTPDKKAREILQAALMVLGRR 457



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 61/277 (22%), Positives = 126/277 (45%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G  +   +Y+++I +  K G +D+A++++S M+  G+ P ++ + +LI      G   +A
Sbjct: 191  GMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKA 250

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
              +F +M   G+ P   +                      +M   G  +S  I+  L+D 
Sbjct: 251  LELFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDI 310

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            Y   GR  D    I  ++  G   S+ ++  +   Y   G+ ++ + V+  M+  G+  +
Sbjct: 311  YGQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPN 370

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
              + N +I+ FG  G+  +AL ++  M++ G+ PD+ T++ L+K +      +    ++ 
Sbjct: 371  LIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYS 430

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKM 1105
            +M+  G  PD K    + + L   G+ +   Q F  M
Sbjct: 431  EMESSGCTPDKKAREILQAALMVLGRRNCKFQIFLAM 467



 Score = 76.3 bits (186), Expect = 4e-11
 Identities = 72/376 (19%), Positives = 151/376 (40%), Gaps = 36/376 (9%)
 Frame = +2

Query: 581  DEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMW 760
            +  G + S E + + +      G +     ++  M+  G+  SS  Y+ +I      G  
Sbjct: 13   ESTGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRT 72

Query: 761  KKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLL 940
             +A  +  EM   G+    ++YN ++  F K G L  A +V   +   G+  +  T+ +L
Sbjct: 73   LEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEIL 132

Query: 941  IKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGH 1120
            + ++   G +     +  +M+++G   +  ++  +I    + G W       E+++  G 
Sbjct: 133  LDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGM 192

Query: 1121 ETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVK 1300
                 IY  ++D +G+YG   +A E +  ++ +G+      +  L   +   G   + ++
Sbjct: 193  PLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALE 252

Query: 1301 VLSIMEEEGIEP------------------NLIMLN-----------------VLINAFG 1375
            + S M+ +G+ P                  N+I  N                 +L++ +G
Sbjct: 253  LFSKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYG 312

Query: 1376 IAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDR- 1552
              GR ++A      +   GI P    +  +  A+ +     Q  ++ Q M + G  P+  
Sbjct: 313  QYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLI 372

Query: 1553 KARELLNAAVMALEHR 1600
                L+NA  +A  HR
Sbjct: 373  MLNVLINAFGIAGRHR 388


>gb|EXB29192.1| hypothetical protein L484_019727 [Morus notabilis]
          Length = 506

 Score =  578 bits (1490), Expect = e-162
 Identities = 273/440 (62%), Positives = 347/440 (78%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G+E+S E Y+++I   C+ G VD AM L++++  +G  P+   Y  LIEALG+VGRTLEA
Sbjct: 65   GEELSGETYNHLIREYCRAGNVDGAMTLLAQLNGLGFHPSFATYACLIEALGSVGRTLEA 124

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
            E +FQEM +FG +P + +                  RVL++MDE+G +++RE +E LLDY
Sbjct: 125  ECLFQEMRFFGFKPGIKLCNVLLKGCLKKGLLEVGIRVLELMDEVGVEKNRESYEILLDY 184

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            YVNAGRL DTW++I +MR +G+ LSSFVY +VIGLYRDNGMWKKAM VV+E++E+G+   
Sbjct: 185  YVNAGRLEDTWWVINEMRSKGFRLSSFVYGKVIGLYRDNGMWKKAMDVVEEIREMGLASV 244

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
            R++YNSIIDTFGKYG+L+DALQVF KM+ E VKPDITTWN LI WHC  GDV +AL LF 
Sbjct: 245  RKVYNSIIDTFGKYGELDDALQVFEKMRGENVKPDITTWNSLILWHCRAGDVGKALELFA 304

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYG 1174
            +MQEEGLYPDPKIF+T+ISRL E+GKWD++++ FE M  +G++ SG IY VLVDIYGQYG
Sbjct: 305  EMQEEGLYPDPKIFITVISRLGEQGKWDMIKKMFENMNCRGYKKSGVIYGVLVDIYGQYG 364

Query: 1175 RFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLN 1354
            +F  AEECI ALK EG+P+   +FCVLANAYA QGLC+QT+KVL +ME EGIEPN++MLN
Sbjct: 365  KFQGAEECISALKWEGLPISASVFCVLANAYAQQGLCDQTLKVLQLMEAEGIEPNVVMLN 424

Query: 1355 VLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSA 1534
            VLINAFGIAGRH EALSIYHHI E G SPDV+TYTT+MKAF+RAK+  ++PE+Y+EM  A
Sbjct: 425  VLINAFGIAGRHLEALSIYHHIKEIGFSPDVVTYTTLMKAFIRAKKCDKVPEIYKEMECA 484

Query: 1535 GCSPDRKARELLNAAVMALE 1594
            GC+PDRKAR++L  A+  LE
Sbjct: 485  GCTPDRKARQMLKVALNVLE 504


>ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 514

 Score =  570 bits (1469), Expect = e-160
 Identities = 277/500 (55%), Positives = 372/500 (74%)
 Frame = +2

Query: 101  PISLFLSYSPKTSDNPRRTAILHCAYPLQQHVTHQSCGAEKAGSFSDHVNSPFGEHPFGK 280
            P+S+F S    + ++        C   +++ V      A   G+ +  + SP G +  G+
Sbjct: 17   PLSVFFSTHSSSREHAGHKLNSSCHSGMRRCVKEGY--AYSLGNKNLSIKSPDGSNS-GE 73

Query: 281  EISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAES 460
            E S   Y+  I   CK G +D+AM L+++M+A+G  P+ + Y +LIEAL +VGRTLEA++
Sbjct: 74   EFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADA 133

Query: 461  VFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYV 640
            +FQEMV FG  P L                    R+L VM++MG  R++E +E LLDY+V
Sbjct: 134  IFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHV 193

Query: 641  NAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQ 820
            NAGRL DTW II +MR +G+ L+SFVY +VIGLYRDNGMWKKA+G+V+E++E+G+ +DRQ
Sbjct: 194  NAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ 253

Query: 821  IYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQM 1000
            IYNSIIDTFGKYG+L +AL+VF KMQ+E ++PDI TWN LI+WHC  GDV +AL LF QM
Sbjct: 254  IYNSIIDTFGKYGELVEALEVFEKMQQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313

Query: 1001 QEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRF 1180
            QE+G YPDPKIF+T+IS L E GKWD+++++FE MK +GH   GAIYA+LVDIYGQYGRF
Sbjct: 314  QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373

Query: 1181 HDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVL 1360
             D EECI ALK EG+     +FC+LANAYA QGLCEQTVKVL +ME EGIEPNL+MLNVL
Sbjct: 374  RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433

Query: 1361 INAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGC 1540
            INAFG+AG++KEALS+YH + + GISPD++TY+T+MKAF+RAK+F ++PE+Y++M S+GC
Sbjct: 434  INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493

Query: 1541 SPDRKARELLNAAVMALEHR 1600
            +PDRKAR++L +A++ LE R
Sbjct: 494  TPDRKARQILQSALVVLEQR 513


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  569 bits (1466), Expect = e-159
 Identities = 272/442 (61%), Positives = 350/442 (79%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G+E+S  +Y+  I   C+ G VDKAMKL+++MEA+G   +L  YT +IEALG+VGRTLEA
Sbjct: 18   GEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEA 77

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
            E++F+EMV+ G++  L V                  +VL  MD +G  R+R  +E L+DY
Sbjct: 78   EAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDY 137

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            Y  AGRL+D W +IG+M + G+   SFVYS+VIG+YRDNGMWKKAM +V E++E+GV +D
Sbjct: 138  YGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLD 197

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
            ++IYNSIIDTFGK G+L +AL+VF KMQ+EGVKPDI TWN LI+WHC  GDV +AL LF 
Sbjct: 198  KRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFS 257

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYG 1174
            +MQEEGLYPDPKIF+T+ISRL E+GKWD+++++FE MK +GH+ SGAIYA+LVDIYGQYG
Sbjct: 258  KMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYG 317

Query: 1175 RFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLN 1354
            RF   EECI ALK+EG+     +FCVLANAYA QGLCEQTVKVL +ME EGIEPNLIMLN
Sbjct: 318  RFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLN 377

Query: 1355 VLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSA 1534
            +LINAFGIAGRH EALS+YHHI ++GISPDV+TY+T+MKA +RA++F ++PE+Y+EM SA
Sbjct: 378  MLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESA 437

Query: 1535 GCSPDRKARELLNAAVMALEHR 1600
            GC+PDRKARE+L  A++ L+ R
Sbjct: 438  GCTPDRKAREMLQTALLVLQQR 459



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 59/256 (23%), Positives = 122/256 (47%)
 Frame = +2

Query: 788  MKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGD 967
            + E G  +   +YN+ I    + G ++ A+++  +M+  G    + ++  +I+     G 
Sbjct: 14   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 73

Query: 968  VNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAV 1147
               A  +F +M   GL  D +++  M+     +G  +L  +   +M   G   + A Y  
Sbjct: 74   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 133

Query: 1148 LVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEG 1327
            LVD YG+ GR +D    I  +  +G      ++  +   Y   G+ ++ ++++  + E G
Sbjct: 134  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 193

Query: 1328 IEPNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIP 1507
            +  +  + N +I+ FG  G   EAL ++  + E G+ PD++T+ ++++   +A    +  
Sbjct: 194  VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 253

Query: 1508 ELYQEMVSAGCSPDRK 1555
            EL+ +M   G  PD K
Sbjct: 254  ELFSKMQEEGLYPDPK 269



 Score = 93.2 bits (230), Expect = 3e-16
 Identities = 68/320 (21%), Positives = 134/320 (41%)
 Frame = +2

Query: 578  MDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGM 757
            + E G + S  ++   +      G +     ++ QM   G++LS   Y+ VI      G 
Sbjct: 14   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 73

Query: 758  WKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNL 937
              +A  +  EM  LG+ +D ++YN ++ +  + G LE A +V  +M   G+  +  T+  
Sbjct: 74   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 133

Query: 938  LIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKG 1117
            L+ ++   G +N    + G+M  +G  PD  ++  +I    + G W    +   +++  G
Sbjct: 134  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 193

Query: 1118 HETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTV 1297
                  IY  ++D +G+ G   +A                                   +
Sbjct: 194  VSLDKRIYNSIIDTFGKCGELSEA-----------------------------------L 218

Query: 1298 KVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAF 1477
            +V   M+EEG++P+++  N LI     AG   +AL ++  + E G+ PD   + T++   
Sbjct: 219  EVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRL 278

Query: 1478 MRAKQFSQIPELYQEMVSAG 1537
                ++  I   ++ M   G
Sbjct: 279  GEQGKWDVIKRNFENMKCRG 298


>ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citrus clementina]
            gi|567871835|ref|XP_006428507.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530563|gb|ESR41746.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
            gi|557530564|gb|ESR41747.1| hypothetical protein
            CICLE_v10011504mg [Citrus clementina]
          Length = 514

 Score =  568 bits (1465), Expect = e-159
 Identities = 276/500 (55%), Positives = 372/500 (74%)
 Frame = +2

Query: 101  PISLFLSYSPKTSDNPRRTAILHCAYPLQQHVTHQSCGAEKAGSFSDHVNSPFGEHPFGK 280
            P+S+F S    + ++        C   +++ V      A   G+ +  + SP G +  G+
Sbjct: 17   PLSVFFSTHSSSREHAGHKLNSSCHSGMRRCVKEGY--AYSLGNKNLSIKSPDGSNS-GE 73

Query: 281  EISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAES 460
            E S   Y+  I   CK G +D+AM L+++M+A+G  P+ + Y +LIEAL +VGRTLEA++
Sbjct: 74   EFSGNSYNKSIQYCCKLGDIDEAMALLAQMQALGFHPSSISYASLIEALASVGRTLEADA 133

Query: 461  VFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYV 640
            +FQEMV FG  P L                    R+L VM++MG  R++E +E LLDY+V
Sbjct: 134  IFQEMVCFGFNPKLRFYNILLRGFLKKGLLGLGSRLLMVMEDMGICRNQETYEILLDYHV 193

Query: 641  NAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQ 820
            NAGRL DTW II +MR +G+ L+SFVY +VIGLYRDNGMWKKA+G+V+E++E+G+ +DRQ
Sbjct: 194  NAGRLDDTWLIINEMRSKGFQLNSFVYGKVIGLYRDNGMWKKAVGIVEEIREMGLSLDRQ 253

Query: 821  IYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQM 1000
            IYNSIIDTFGKYG+L +AL+VF KM++E ++PDI TWN LI+WHC  GDV +AL LF QM
Sbjct: 254  IYNSIIDTFGKYGELVEALEVFEKMRQESIRPDIVTWNSLIRWHCKAGDVAKALELFTQM 313

Query: 1001 QEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRF 1180
            QE+G YPDPKIF+T+IS L E GKWD+++++FE MK +GH   GAIYA+LVDIYGQYGRF
Sbjct: 314  QEQGFYPDPKIFITIISCLGELGKWDVIKKNFENMKDRGHGKIGAIYAILVDIYGQYGRF 373

Query: 1181 HDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVL 1360
             D EECI ALK EG+     +FC+LANAYA QGLCEQTVKVL +ME EGIEPNL+MLNVL
Sbjct: 374  RDPEECIAALKLEGLQPSGSMFCILANAYAQQGLCEQTVKVLQLMEPEGIEPNLVMLNVL 433

Query: 1361 INAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGC 1540
            INAFG+AG++KEALS+YH + + GISPD++TY+T+MKAF+RAK+F ++PE+Y++M S+GC
Sbjct: 434  INAFGVAGKYKEALSVYHLMKDIGISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGC 493

Query: 1541 SPDRKARELLNAAVMALEHR 1600
            +PDRKAR++L +A++ LE R
Sbjct: 494  TPDRKARQILQSALVVLEQR 513


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565369409|ref|XP_006351328.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565369411|ref|XP_006351329.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 523

 Score =  548 bits (1413), Expect = e-153
 Identities = 270/507 (53%), Positives = 366/507 (72%), Gaps = 4/507 (0%)
 Frame = +2

Query: 92   CNHPISLFLSYSPKTSDNPRRTAILHCAYPLQQHVTHQSCGAEKAGSFSDHVNSPFGEHP 271
            C H +  F+    K   NP +  +LH +  L      +  G       +  + +   EH 
Sbjct: 16   CPHSVCGFVPVCLKHHINPVKHKMLHTSCQLILQSRGKRFGF-LVNCLNGTIENSNNEHQ 74

Query: 272  F----GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVG 439
                  +EIS +LY+  I  LC +G VDKAM+L+SEMEA+G  P+ + Y++LI ALG+VG
Sbjct: 75   TCYRNDEEISYDLYNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVG 134

Query: 440  RTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFE 619
            RT EA+++FQEM+    +P + V                  +VL ++D++  DR++E +E
Sbjct: 135  RTSEADAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYE 194

Query: 620  TLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKEL 799
             LL+YYV+AGRL DTW I+ +MR+  Y L+SFVYS++I LYRDNGMWKKA+G+V+E++E+
Sbjct: 195  ILLEYYVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREM 254

Query: 800  GVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRA 979
            G+ +D++I+NSIIDTFGKYG+L +AL++F KM++EG+KPD  TWN LI+WHC  G ++ A
Sbjct: 255  GLRLDKRIFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTA 314

Query: 980  LGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDI 1159
            + LF +MQ++GLYPDPKIF+ +I+ L E+G+W ++    E M+ +GH  SGAIYAVLVDI
Sbjct: 315  IELFNEMQDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENMQGRGHHKSGAIYAVLVDI 374

Query: 1160 YGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPN 1339
            YGQ+GRF DAE C+ +LK EG+ + P IFCVLA+AYA QGLCEQTVKVL IME EG+EPN
Sbjct: 375  YGQHGRFEDAEYCLNSLKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPN 434

Query: 1340 LIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQ 1519
            LIMLN+LINAFG AGRH EA SIY HI E GI+PDVITY+T+MKAFMRAK+F Q+P++Y 
Sbjct: 435  LIMLNMLINAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTLMKAFMRAKKFDQVPKIYS 494

Query: 1520 EMVSAGCSPDRKARELLNAAVMALEHR 1600
            EM S GC+PDRKARE+L +A+M LE R
Sbjct: 495  EMESTGCTPDRKAREMLQSALMILEQR 521


>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 523

 Score =  546 bits (1407), Expect = e-152
 Identities = 258/442 (58%), Positives = 343/442 (77%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G+EIS +LY+  I  LC +G +DKAM+L+SEMEA+G  P+ + Y++LI ALG+VGRT EA
Sbjct: 80   GEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEA 139

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
            +++FQEM+    +P + V                  +VL ++D++  DR++E +E LL+Y
Sbjct: 140  DAIFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEY 199

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            YV+AGRL DTW I+ +MR+  Y L+SFVYS++I LYRDNGMWKKA+G+V+E++E+G+ +D
Sbjct: 200  YVSAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLD 259

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
            ++++NSIIDTFGKYG+L +AL +F KM++EG+KPD  TWN LI+WHC  G ++ A+ LF 
Sbjct: 260  KRLFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFN 319

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYG 1174
            +MQE+GLYPDPKIF+ + + L E+G+WD +    E M+ +GH  SGAIYAVLVDIYGQ G
Sbjct: 320  EMQEQGLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQQG 379

Query: 1175 RFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLN 1354
            RF DAE C+ ALK EG+ + P IFCVLA+AYA QGLCEQTVKVL IME EG+EPNLIMLN
Sbjct: 380  RFEDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLN 439

Query: 1355 VLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSA 1534
            +LINAFG AGRH EA SIY HI E GI+PDVITY+T+MKAF+RAK+F Q+P++Y EM S 
Sbjct: 440  MLINAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMEST 499

Query: 1535 GCSPDRKARELLNAAVMALEHR 1600
            GC+PDRKARE+L +A+M LE R
Sbjct: 500  GCTPDRKAREMLQSALMILEQR 521



 Score = 80.1 bits (196), Expect = 3e-12
 Identities = 67/295 (22%), Positives = 125/295 (42%)
 Frame = +2

Query: 689  KRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLE 868
            + G  +S  +Y+  I      G   KAM ++ EM+ LG       Y+S+I   G  G+  
Sbjct: 78   RNGEEISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTS 137

Query: 869  DALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMI 1048
            +A  +F +M     KP I  +N+L++                    +GL           
Sbjct: 138  EADAIFQEMLCSSRKPRIKVFNILLR----------------SFLRKGLL---------- 171

Query: 1049 SRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVP 1228
             RLA++    +L    +    +  ET    Y +L++ Y   GR  D    +  ++ E  P
Sbjct: 172  -RLADK----VLMLLDDLAVDRNQET----YEILLEYYVSAGRLEDTWLIVAKMRRESYP 222

Query: 1229 MLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSI 1408
            +   ++  +   Y   G+ ++ + ++  + E G+  +  + N +I+ FG  G   EAL +
Sbjct: 223  LNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGEALGM 282

Query: 1409 YHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLN 1573
            +  + + GI PD  T+ ++++   +        EL+ EM   G  PD K   ++N
Sbjct: 283  FDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQEQGLYPDPKIFIIIN 337


>gb|EOY09998.1| Pentatricopeptide repeat-containing protein, putative isoform 2
            [Theobroma cacao]
          Length = 487

 Score =  541 bits (1395), Expect = e-151
 Identities = 256/417 (61%), Positives = 333/417 (79%)
 Frame = +2

Query: 254  PFGEHPFGKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGN 433
            PFG +  G+E++SEL++  I   CK G VD AMKLV+ MEA+G  P  + Y  LIE+LG+
Sbjct: 65   PFGSNS-GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGS 123

Query: 434  VGRTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREI 613
            VGRTLEA+++FQEM+  G++P + +                  +VL VMDE G  +++E 
Sbjct: 124  VGRTLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQET 183

Query: 614  FETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMK 793
            +E LLDYYVNAGRL DTW ++ +M+++G  L+SFVYS++I LYRDNGMW+KA+G+V+E++
Sbjct: 184  YEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIR 243

Query: 794  ELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVN 973
            E G+ +DRQIYNSIIDTFGKYG+L +AL+VF KM++E ++PDITTWN LI+WHC  GD+ 
Sbjct: 244  EKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLT 303

Query: 974  RALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLV 1153
            +AL LF +MQE+GLYPDPKIF+++ISRL E GKWD+++++FE MK +GH+  GAIYA+LV
Sbjct: 304  KALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILV 363

Query: 1154 DIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIE 1333
            DIYGQYGRF DAE CI ALK+EG+     +FCVLANAYA QG CEQTVKVL IME EGIE
Sbjct: 364  DIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIE 423

Query: 1334 PNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQI 1504
            PN++MLNVLINAFGIAGRH+EALSIYHHI +SGISPDVITY+T+MKAF+RAK+F ++
Sbjct: 424  PNIVMLNVLINAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRV 480



 Score = 95.5 bits (236), Expect = 6e-17
 Identities = 59/252 (23%), Positives = 119/252 (47%)
 Frame = +2

Query: 800  GVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRA 979
            G  +  +++N  I  + K G +++A+++   M+  G  P+  ++  LI+     G    A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 980  LGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDI 1159
              LF +M   GL P  ++F  ++     +G   L  +    M  +G   +   Y +L+D 
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1160 YGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPN 1339
            Y   GR  D    +  +K +G+ +   ++  +   Y   G+  + + ++  + E+GI  +
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1340 LIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQ 1519
              + N +I+ FG  G   EAL ++  + +  I PD+ T+ ++++   +A   ++  EL+ 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1520 EMVSAGCSPDRK 1555
            EM   G  PD K
Sbjct: 311  EMQEQGLYPDPK 322



 Score = 80.1 bits (196), Expect = 3e-12
 Identities = 73/372 (19%), Positives = 154/372 (41%), Gaps = 36/372 (9%)
 Frame = +2

Query: 590  GTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKA 769
            G + + E+    +  Y   G + +   ++  M   G+  +S  Y  +I      G   +A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 770  MGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKW 949
              +  EM  LG+    +++N ++  F + G L  A++V V M + GV  +  T+ +L+ +
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 950  HCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETS 1129
            +   G +     +  +M+E+G++ +  ++  +I    + G W       E+++ KG    
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1130 GAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLS 1309
              IY  ++D +G+YG   +A E    +K E +      +  L   +   G   + +++ +
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1310 IMEEEGIEPN------------------LIMLN-----------------VLINAFGIAG 1384
             M+E+G+ P+                  +I  N                 +L++ +G  G
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1385 RHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPD-RKAR 1561
            R ++A      +   G+ P    +  +  A+ +     Q  ++ Q M + G  P+     
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1562 ELLNAAVMALEH 1597
             L+NA  +A  H
Sbjct: 431  VLINAFGIAGRH 442


>gb|EOY09999.1| Pentatricopeptide repeat-containing protein, putative isoform 3
            [Theobroma cacao]
          Length = 489

 Score =  535 bits (1378), Expect = e-149
 Identities = 258/449 (57%), Positives = 337/449 (75%)
 Frame = +2

Query: 254  PFGEHPFGKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGN 433
            PFG +  G+E++SEL++  I   CK G VD AMKLV+ MEA+G  P  + Y  LIE+LG+
Sbjct: 65   PFGSNS-GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGS 123

Query: 434  VGRTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREI 613
            VGRTLEA+++FQEM+  G++P + +                  +VL VMDE G  +++E 
Sbjct: 124  VGRTLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQET 183

Query: 614  FETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMK 793
            +E LLDYYVNAGRL DTW ++ +M+++G  L+SFVYS++I LYRDNGMW+KA+G+V+E++
Sbjct: 184  YEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIR 243

Query: 794  ELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVN 973
            E G+ +DRQIYNSIIDTFGKYG+L +AL+VF KM++E ++PDITTWN LI+WHC  GD+ 
Sbjct: 244  EKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLT 303

Query: 974  RALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLV 1153
            +AL LF +MQE+GLYPDPKIF+++ISRL E GKWD+++++FE MK +GH+  GAIYA+LV
Sbjct: 304  KALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILV 363

Query: 1154 DIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIE 1333
            DIYGQYGRF DAE CI ALK+EG+     +FCVLANAYA QG CEQTVKVL IME EGIE
Sbjct: 364  DIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIE 423

Query: 1334 PNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPEL 1513
            PN++MLNVLINAFGIAGRH+EALSIYHHI +S                        +PE+
Sbjct: 424  PNIVMLNVLINAFGIAGRHEEALSIYHHIRDS------------------------VPEI 459

Query: 1514 YQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            Y+EM S+GC+PDRKAR++L  A+M LE R
Sbjct: 460  YREMESSGCTPDRKARQMLQTALMVLEQR 488


>ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Glycine max]
            gi|571436687|ref|XP_006573838.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Glycine max]
            gi|571436689|ref|XP_006573839.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Glycine max]
          Length = 523

 Score =  529 bits (1362), Expect = e-147
 Identities = 254/439 (57%), Positives = 332/439 (75%)
 Frame = +2

Query: 278  KEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAE 457
            +E+SS L S  I   CK+G +D+AM L+S+MEA G   +   Y  LIEALGNVGRT EA+
Sbjct: 77   EELSSNLCSQFICECCKEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEAD 136

Query: 458  SVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYY 637
             +F+EM+  G +P L                     VLK MD  G  RS+E ++  LDYY
Sbjct: 137  MLFKEMICDGYKPKLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYY 196

Query: 638  VNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDR 817
            V AGRL DTW  I  M+++G+ L+SFVYS+V+G+YRDNGMWKKA+ V++E++E G+ +D 
Sbjct: 197  VGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDT 256

Query: 818  QIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQ 997
             I NSIIDTFGKYG+L++AL++F KMQKEGV+P+I TWN LIKWHC  GD  ++  LF  
Sbjct: 257  HICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTD 316

Query: 998  MQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGR 1177
            MQE+GLYPDPKIFVT+IS + E+GKW ++++ FE MK +G++  GA+YAVLVDIYGQYG+
Sbjct: 317  MQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGK 376

Query: 1178 FHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNV 1357
            F +A EC+ ALK+EGV + P IFCVLANAYA QGLCEQ + VL IME EGIEPN++MLN+
Sbjct: 377  FQNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNM 436

Query: 1358 LINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAG 1537
            LINAFG AGR+ EA+S+YHHI ESG+SPDV+TYTT+MKAF+RAK+F ++P +Y+EM +  
Sbjct: 437  LINAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDR 496

Query: 1538 CSPDRKARELLNAAVMALE 1594
            C+PDRKAR++L  A+M LE
Sbjct: 497  CTPDRKARQMLQVALMVLE 515


>gb|EMJ19196.1| hypothetical protein PRUPE_ppa005672mg [Prunus persica]
          Length = 448

 Score =  526 bits (1354), Expect = e-146
 Identities = 254/441 (57%), Positives = 333/441 (75%)
 Frame = +2

Query: 278  KEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAE 457
            +E+S E ++++I+  C+ G +DKAM L++EMEA+G+RP  + Y  LI+ALG+ GRT EA+
Sbjct: 29   EELSGESFNHLISDFCRAGQIDKAMALLAEMEALGVRPNSMSYAHLIDALGSTGRTSEAD 88

Query: 458  SVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYY 637
             +FQEM+ FG+RP + +                  RVL VM + G ++++E +E LLDYY
Sbjct: 89   MLFQEMISFGLRPRIKLYNVLLRGFLKKGLLGLAIRVLAVMGDFGAEKNQETYEILLDYY 148

Query: 638  VNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDR 817
            VNAGRL DTW +I +M+++ + LSSFVYS+VIGLYRDNGMWKKAM +V E++E G+ +D+
Sbjct: 149  VNAGRLEDTWSMINEMKRKRFRLSSFVYSKVIGLYRDNGMWKKAMDIVGEIREKGMTLDK 208

Query: 818  QIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQ 997
            QIYNS+IDTFGKYG++++AL+VFVKM++EGVK DITT+N LI+WHC  GD+++AL L  +
Sbjct: 209  QIYNSVIDTFGKYGEVDEALEVFVKMKQEGVKADITTFNSLIRWHCKAGDISKALELLTE 268

Query: 998  MQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGR 1177
            MQE+GLYPDPKIFVT+ISRL E+GKWD+++++FE MK +GHE SG IYA LVDIYGQYG+
Sbjct: 269  MQEQGLYPDPKIFVTVISRLGEQGKWDMIQKTFENMKRRGHEKSGTIYAALVDIYGQYGK 328

Query: 1178 FHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNV 1357
            F DAEECI ALKAEG+     +FCVLANAYA QGLC QTVKVL +ME EGIE N+IMLNV
Sbjct: 329  FKDAEECISALKAEGLIPSASMFCVLANAYAQQGLCGQTVKVLQLMEAEGIELNVIMLNV 388

Query: 1358 LINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAG 1537
            L+NAFG+AGRH EALSIYHHI ES                        +PE+Y+EM  AG
Sbjct: 389  LMNAFGVAGRHLEALSIYHHINES------------------------VPEVYKEMEHAG 424

Query: 1538 CSPDRKARELLNAAVMALEHR 1600
            C+PDRKAR++L  A+M L+ R
Sbjct: 425  CTPDRKARQMLQVALMVLQQR 445



 Score = 96.7 bits (239), Expect = 3e-17
 Identities = 68/306 (22%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
 Frame = +2

Query: 623  LLDYYVNAGRLSDTWFIIGQMR-KRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKEL 799
            L+ Y ++    S  +  + QMR K    LS   ++ +I  +   G   KAM ++ EM+ L
Sbjct: 3    LIIYSIDLSFPSLIFIPMNQMRPKENEELSGESFNHLISDFCRAGQIDKAMALLAEMEAL 62

Query: 800  GVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRA 979
            GV  +   Y  +ID  G  G+  +A  +F +M   G++P I  +N+L++     G +  A
Sbjct: 63   GVRPNSMSYAHLIDALGSTGRTSEADMLFQEMISFGLRPRIKLYNVLLRGFLKKGLLGLA 122

Query: 980  LGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDI 1159
            + +   M + G   + + +  ++      G+ +       +MK K    S  +Y+ ++ +
Sbjct: 123  IRVLAVMGDFGAEKNQETYEILLDYYVNAGRLEDTWSMINEMKRKRFRLSSFVYSKVIGL 182

Query: 1160 YGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPN 1339
            Y   G +  A + +  ++ +G+ +   I+  + + +   G  ++ ++V   M++EG++ +
Sbjct: 183  YRDNGMWKKAMDIVGEIREKGMTLDKQIYNSVIDTFGKYGEVDEALEVFVKMKQEGVKAD 242

Query: 1340 LIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQ 1519
            +   N LI     AG   +AL +   + E G+ PD   + TV+       ++  I + ++
Sbjct: 243  ITTFNSLIRWHCKAGDISKALELLTEMQEQGLYPDPKIFVTVISRLGEQGKWDMIQKTFE 302

Query: 1520 EMVSAG 1537
             M   G
Sbjct: 303  NMKRRG 308


>emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score =  523 bits (1346), Expect = e-145
 Identities = 257/442 (58%), Positives = 328/442 (74%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G+E+S  +Y+  I   C+ G VDKAMKL+++MEA+G   +L  YT +IEALG+VGRTLEA
Sbjct: 37   GEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEA 96

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
            E++F+EMV+ G++  L V                  +VL  MD +G  R+R  +E L+DY
Sbjct: 97   EAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDY 156

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            Y  AGRL+D W +IG+M + G+   SFVYS+VIG+YRDNGMWKKAM +V E++E+GV +D
Sbjct: 157  YGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLD 216

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
            ++IYNSIIDTFGK G+L +AL+VF KMQ+EGVKPDI TWN LI+WHC  GDV +AL LF 
Sbjct: 217  KRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFS 276

Query: 995  QMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYG 1174
            +MQEEGLYPDPKIF+T+ISRL E+GKWD+++++FE MK +GH+ SGAIYA+LVDIYGQYG
Sbjct: 277  KMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYG 336

Query: 1175 RFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLN 1354
            RF   EECI ALK+EG+     +FCVLANAYA QGLCEQTVKVL +ME EGIEPNLIMLN
Sbjct: 337  RFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLN 396

Query: 1355 VLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSA 1534
            +LINAFGIAGRH EALS+YHHI ++                        +PE+Y+EM SA
Sbjct: 397  MLINAFGIAGRHLEALSVYHHIKDT------------------------VPEIYEEMESA 432

Query: 1535 GCSPDRKARELLNAAVMALEHR 1600
            GC+PDRKARE+L  A++ L+ R
Sbjct: 433  GCTPDRKAREMLQTALLVLQQR 454



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 59/256 (23%), Positives = 122/256 (47%)
 Frame = +2

Query: 788  MKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGD 967
            + E G  +   +YN+ I    + G ++ A+++  +M+  G    + ++  +I+     G 
Sbjct: 33   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 92

Query: 968  VNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAV 1147
               A  +F +M   GL  D +++  M+     +G  +L  +   +M   G   + A Y  
Sbjct: 93   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 152

Query: 1148 LVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEG 1327
            LVD YG+ GR +D    I  +  +G      ++  +   Y   G+ ++ ++++  + E G
Sbjct: 153  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 212

Query: 1328 IEPNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIP 1507
            +  +  + N +I+ FG  G   EAL ++  + E G+ PD++T+ ++++   +A    +  
Sbjct: 213  VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 272

Query: 1508 ELYQEMVSAGCSPDRK 1555
            EL+ +M   G  PD K
Sbjct: 273  ELFSKMQEEGLYPDPK 288



 Score = 93.2 bits (230), Expect = 3e-16
 Identities = 68/320 (21%), Positives = 134/320 (41%)
 Frame = +2

Query: 578  MDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGM 757
            + E G + S  ++   +      G +     ++ QM   G++LS   Y+ VI      G 
Sbjct: 33   ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 92

Query: 758  WKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNL 937
              +A  +  EM  LG+ +D ++YN ++ +  + G LE A +V  +M   G+  +  T+  
Sbjct: 93   TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 152

Query: 938  LIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKG 1117
            L+ ++   G +N    + G+M  +G  PD  ++  +I    + G W    +   +++  G
Sbjct: 153  LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 212

Query: 1118 HETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTV 1297
                  IY  ++D +G+ G   +A                                   +
Sbjct: 213  VSLDKRIYNSIIDTFGKCGELSEA-----------------------------------L 237

Query: 1298 KVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAF 1477
            +V   M+EEG++P+++  N LI     AG   +AL ++  + E G+ PD   + T++   
Sbjct: 238  EVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKMQEEGLYPDPKIFITIISRL 297

Query: 1478 MRAKQFSQIPELYQEMVSAG 1537
                ++  I   ++ M   G
Sbjct: 298  GEQGKWDVIKRNFENMKCRG 317


>gb|EOY10000.1| Pentatricopeptide repeat-containing protein, putative isoform 4
            [Theobroma cacao]
          Length = 477

 Score =  504 bits (1297), Expect = e-140
 Identities = 240/396 (60%), Positives = 312/396 (78%)
 Frame = +2

Query: 254  PFGEHPFGKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGN 433
            PFG +  G+E++SEL++  I   CK G VD AMKLV+ MEA+G  P  + Y  LIE+LG+
Sbjct: 65   PFGSNS-GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGS 123

Query: 434  VGRTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREI 613
            VGRTLEA+++FQEM+  G++P + +                  +VL VMDE G  +++E 
Sbjct: 124  VGRTLEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQET 183

Query: 614  FETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMK 793
            +E LLDYYVNAGRL DTW ++ +M+++G  L+SFVYS++I LYRDNGMW+KA+G+V+E++
Sbjct: 184  YEILLDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIR 243

Query: 794  ELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVN 973
            E G+ +DRQIYNSIIDTFGKYG+L +AL+VF KM++E ++PDITTWN LI+WHC  GD+ 
Sbjct: 244  EKGISLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLT 303

Query: 974  RALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLV 1153
            +AL LF +MQE+GLYPDPKIF+++ISRL E GKWD+++++FE MK +GH+  GAIYA+LV
Sbjct: 304  KALELFTEMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILV 363

Query: 1154 DIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIE 1333
            DIYGQYGRF DAE CI ALK+EG+     +FCVLANAYA QG CEQTVKVL IME EGIE
Sbjct: 364  DIYGQYGRFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIE 423

Query: 1334 PNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISP 1441
            PN++MLNVLINAFGIAGRH+EALSIYHHI +S +SP
Sbjct: 424  PNIVMLNVLINAFGIAGRHEEALSIYHHIRDS-VSP 458



 Score = 95.5 bits (236), Expect = 6e-17
 Identities = 59/252 (23%), Positives = 119/252 (47%)
 Frame = +2

Query: 800  GVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRA 979
            G  +  +++N  I  + K G +++A+++   M+  G  P+  ++  LI+     G    A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 980  LGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDI 1159
              LF +M   GL P  ++F  ++     +G   L  +    M  +G   +   Y +L+D 
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 1160 YGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPN 1339
            Y   GR  D    +  +K +G+ +   ++  +   Y   G+  + + ++  + E+GI  +
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1340 LIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQ 1519
              + N +I+ FG  G   EAL ++  + +  I PD+ T+ ++++   +A   ++  EL+ 
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1520 EMVSAGCSPDRK 1555
            EM   G  PD K
Sbjct: 311  EMQEQGLYPDPK 322



 Score = 80.1 bits (196), Expect = 3e-12
 Identities = 73/372 (19%), Positives = 154/372 (41%), Gaps = 36/372 (9%)
 Frame = +2

Query: 590  GTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKA 769
            G + + E+    +  Y   G + +   ++  M   G+  +S  Y  +I      G   +A
Sbjct: 71   GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 770  MGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKW 949
              +  EM  LG+    +++N ++  F + G L  A++V V M + GV  +  T+ +L+ +
Sbjct: 131  DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 950  HCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETS 1129
            +   G +     +  +M+E+G++ +  ++  +I    + G W       E+++ KG    
Sbjct: 191  YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 1130 GAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLS 1309
              IY  ++D +G+YG   +A E    +K E +      +  L   +   G   + +++ +
Sbjct: 251  RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 1310 IMEEEGIEPN------------------LIMLN-----------------VLINAFGIAG 1384
             M+E+G+ P+                  +I  N                 +L++ +G  G
Sbjct: 311  EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYG 370

Query: 1385 RHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPD-RKAR 1561
            R ++A      +   G+ P    +  +  A+ +     Q  ++ Q M + G  P+     
Sbjct: 371  RFQDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLN 430

Query: 1562 ELLNAAVMALEH 1597
             L+NA  +A  H
Sbjct: 431  VLINAFGIAGRH 442


>ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Glycine max]
          Length = 414

 Score =  502 bits (1292), Expect = e-139
 Identities = 241/415 (58%), Positives = 318/415 (76%)
 Frame = +2

Query: 350  MKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAESVFQEMVYFGVRPHLAVXXXXXXX 529
            M L+S+MEA G   +   Y  LIEALGNVGRT EA+ +F+EMV +G +P L +       
Sbjct: 1    MSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLFKEMVCYGYKPKLNLYHSLLRG 60

Query: 530  XXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALS 709
                        VLK MD++G  RS+E ++  LDYYV AGRL DTW  I +M+++G+ L+
Sbjct: 61   FLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLN 120

Query: 710  SFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFV 889
            SF+YS+V+G+YRDNGMWKKA+ V++E++E G+ +D  I NSIIDTFGKYG+L++AL++F 
Sbjct: 121  SFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFK 180

Query: 890  KMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERG 1069
            KMQKEGV+P+I TWN LIKWHC  GD  +A  LF  MQE+GLYPDPKIFVT+IS L E+G
Sbjct: 181  KMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDMQEQGLYPDPKIFVTIISCLGEQG 240

Query: 1070 KWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFC 1249
            KWD++++ FE MK +G++  GA+YAVLVDIYGQYG+F +A EC+ ALK+EGV + P IFC
Sbjct: 241  KWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFC 300

Query: 1250 VLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIES 1429
            VLANAYA     +Q + VL IME EGIEPN++MLN+LINAFG AGR+ EA+S+YHHI ES
Sbjct: 301  VLANAYA-----QQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKES 355

Query: 1430 GISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLNAAVMALE 1594
            G+SPDV+TYTT+MKAF+RAK+F ++P +Y+EM + GC+PDRKAR++L  A+  LE
Sbjct: 356  GVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPDRKARQMLQVALTVLE 410


>ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
            gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza
            sativa Japonica Group] gi|215693375|dbj|BAG88757.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa
            Japonica Group]
          Length = 492

 Score =  495 bits (1274), Expect = e-137
 Identities = 242/418 (57%), Positives = 308/418 (73%)
 Frame = +2

Query: 347  AMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAESVFQEMVYFGVRPHLAVXXXXXX 526
            +++L+++M+A GLRP+   Y  LI AL   GRTLEAE++  EM   G+RP  A       
Sbjct: 70   SLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLE 129

Query: 527  XXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYAL 706
                        R+L  M + G  R+R  +  LL+ Y  AGRL D+W+++G+M++RG  L
Sbjct: 130  GLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRL 189

Query: 707  SSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVF 886
             +  YS ++ LYRDNGMWKKA  ++ EM+ELGV +D +IYN +IDTFGKYGQL DA +VF
Sbjct: 190  DTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVF 249

Query: 887  VKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAER 1066
             KM  EGVKPDITTWN LI+WHC  G+  RAL  F  MQEEG+YPDPKIFVT+ISRL E+
Sbjct: 250  DKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQ 309

Query: 1067 GKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIF 1246
            GKWD +++ F  M+ +G + SGA+YAVLVDIYGQYG F DA +C+ ALKAE + + P IF
Sbjct: 310  GKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIF 369

Query: 1247 CVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIE 1426
            CVLANAYA QGLCEQTV VL +ME EGIEPNL+MLN+LINAFG AGRH EAL++  HI +
Sbjct: 370  CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKD 429

Query: 1427 SGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            SG+SPDV+TYTT+MKAFMRAK+F ++ E+Y+EM  AGC+PDRKARE+LN A + LE R
Sbjct: 430  SGMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREMLNDASIVLEQR 487



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 62/275 (22%), Positives = 126/275 (45%)
 Frame = +2

Query: 653  LSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNS 832
            L+ +  ++  M+  G   S   Y+R+I      G   +A  ++ EM+ LG+  D   YN+
Sbjct: 67   LASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNA 126

Query: 833  IIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEG 1012
            +++       L  A ++ ++M  +GV  +  T+ LL+  +   G +  +  + G+M+  G
Sbjct: 127  LLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRG 186

Query: 1013 LYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAE 1192
            +  D   + T++    + G W        +M+  G E    IY  L+D +G+YG+  DA 
Sbjct: 187  IRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 246

Query: 1193 ECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAF 1372
            +    + AEGV      +  L   +   G  ++ ++  + M+EEG+ P+  +   +I+  
Sbjct: 247  KVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRL 306

Query: 1373 GIAGRHKEALSIYHHIIESGISPDVITYTTVMKAF 1477
            G  G+  E   ++H +   G+      Y  ++  +
Sbjct: 307  GEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIY 341



 Score = 78.6 bits (192), Expect = 8e-12
 Identities = 52/231 (22%), Positives = 102/231 (44%)
 Frame = +2

Query: 863  LEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVT 1042
            L  +L++   MQ  G++P    +  LI+     G    A  L  +M+  GL PD   +  
Sbjct: 67   LASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNA 126

Query: 1043 MISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEG 1222
            ++  L       L  +   +M   G   +   Y +L++ Y + GR  D+   +  +K  G
Sbjct: 127  LLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRG 186

Query: 1223 VPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEAL 1402
            + +    +  L   Y   G+ ++   ++  M+E G+E ++ + N LI+ FG  G+  +A 
Sbjct: 187  IRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 246

Query: 1403 SIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRK 1555
             ++  +   G+ PD+ T+ ++++   R     +    +  M   G  PD K
Sbjct: 247  KVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPK 297


>ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Brachypodium distachyon]
          Length = 492

 Score =  493 bits (1268), Expect = e-136
 Identities = 236/418 (56%), Positives = 309/418 (73%)
 Frame = +2

Query: 347  AMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAESVFQEMVYFGVRPHLAVXXXXXX 526
            ++ ++++MEA G+RP+   Y  LI AL   GRTLEAE++  EM + G+RP  A       
Sbjct: 72   SLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLE 131

Query: 527  XXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYAL 706
                        R+L  M + G  R+R  +  LLD Y  AGRL D+W+++G+M++RG  L
Sbjct: 132  GLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQL 191

Query: 707  SSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVF 886
             +  YS ++ LYRDNGMWKKA  ++ EM+ELGV +D +IYN +IDTFGKYGQL DA ++F
Sbjct: 192  DTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLF 251

Query: 887  VKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAER 1066
             KM+ EG+KPDI TWN LI+WHC  G++ RAL  F  MQEEG+YPDPKIF+++ISRL E+
Sbjct: 252  EKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRLGEQ 311

Query: 1067 GKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIF 1246
            GKWD L++ F+KM+ +G + SGA+YAVLVDIYGQYGRF DA EC+ ALKAE + + P IF
Sbjct: 312  GKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIF 371

Query: 1247 CVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIE 1426
            CVLANAYA QGLCEQTV VL +ME EGIEPNL+MLN+LINAF  AGRH EA++++ HI +
Sbjct: 372  CVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQHIKD 431

Query: 1427 SGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            SG+SPDV+TYTT+MK FMR K+F ++ E+Y EM  AGC+PDRKARE+L+ A + LE R
Sbjct: 432  SGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKAREMLHDASVTLEQR 489



 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 62/286 (21%), Positives = 129/286 (45%)
 Frame = +2

Query: 653  LSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNS 832
            L+ +  ++  M   G   S+  Y+R+I      G   +A  ++ EM+ LG+  D   YN+
Sbjct: 69   LAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNA 128

Query: 833  IIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEG 1012
            +++       L  A ++ ++M  +GV  +  T+ LL+  +   G +  +  + G+M+  G
Sbjct: 129  LLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRG 188

Query: 1013 LYPDPKIFVTMISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAE 1192
            +  D   + T++    + G W        +M+  G E    IY  L+D +G+YG+  DA 
Sbjct: 189  IQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 248

Query: 1193 ECICALKAEGVPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAF 1372
                 ++AEG+      +  L   +   G  ++ ++  + M+EEG+ P+  +   +I+  
Sbjct: 249  RLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISRL 308

Query: 1373 GIAGRHKEALSIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPE 1510
            G  G+  E   ++  +   G+      Y  ++  + +  +F    E
Sbjct: 309  GEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHE 354



 Score = 82.4 bits (202), Expect = 5e-13
 Identities = 55/231 (23%), Positives = 101/231 (43%)
 Frame = +2

Query: 863  LEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVT 1042
            L  +L V   M+  G++P    +  LI+     G    A  L  +M+  GL PD   +  
Sbjct: 69   LAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNA 128

Query: 1043 MISRLAERGKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEG 1222
            ++  L  R    L  +   +M   G   +   Y +L+D Y + GR  D+   +  +K  G
Sbjct: 129  LLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRG 188

Query: 1223 VPMLPHIFCVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEAL 1402
            + +    +  L   Y   G+ ++   ++  M+E G+E ++ + N LI+ FG  G+  +A 
Sbjct: 189  IQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADAR 248

Query: 1403 SIYHHIIESGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRK 1555
             ++  +   GI PD+ T+  +++   R     +    +  M   G  PD K
Sbjct: 249  RLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPK 299


>ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Setaria italica]
            gi|514768098|ref|XP_004966404.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Setaria italica]
            gi|514768101|ref|XP_004966405.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Setaria italica]
          Length = 493

 Score =  481 bits (1238), Expect = e-133
 Identities = 237/418 (56%), Positives = 302/418 (72%)
 Frame = +2

Query: 347  AMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEAESVFQEMVYFGVRPHLAVXXXXXX 526
            ++ L+++MEA G RP+   Y  LI AL   GRTLEAE++  EM   G RP  A       
Sbjct: 72   SLGLLADMEAAGARPSAAAYARLIRALARAGRTLEAEALLLEMRRLGPRPGAAHYNALLE 131

Query: 527  XXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYAL 706
                        R+L  M + G  R+R  +  LLD Y  AGRL D+W+++G+MR+RG  L
Sbjct: 132  GLLARAHLRLADRLLLQMADDGVARNRRTYVLLLDAYARAGRLEDSWWVLGEMRRRGIRL 191

Query: 707  SSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVF 886
             +  YS ++ LYRDNGMWKKA+ +V EM+E+GV +D +IYNS+IDTFGKYGQL DA +VF
Sbjct: 192  DTAGYSMLVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYNSLIDTFGKYGQLADARRVF 251

Query: 887  VKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAER 1066
             KM+ EG+KPDI+TWN LI+WHC  G++ RAL     MQEEG YPDPKIFV +I RL E+
Sbjct: 252  DKMRAEGIKPDISTWNALIRWHCRVGNMKRALRFLTAMQEEGRYPDPKIFVMIIGRLGEQ 311

Query: 1067 GKWDLLRQSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIF 1246
            GKW  +++ F+ MK +G + SGA+YAVLVDIYGQYG F DA ECI ALKAE   +   IF
Sbjct: 312  GKWGEIKKLFDGMKNRGFKESGAVYAVLVDIYGQYGYFRDARECIAALKAENTQLSARIF 371

Query: 1247 CVLANAYAHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIE 1426
            CVLANAYA QGLCEQTV VL +MEEEG EPNL+MLN+LINAFG AGRH EAL+++ HI +
Sbjct: 372  CVLANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKD 431

Query: 1427 SGISPDVITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            SG+SPDV+TYTT+MK FMRAK+F ++ E+Y++M   GC+PDRKARE+L+ A + LE R
Sbjct: 432  SGMSPDVVTYTTLMKTFMRAKKFEKVSEVYKDMERDGCTPDRKAREMLHDASVILEQR 489


>ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
            gi|241915799|gb|EER88943.1| hypothetical protein
            SORBIDRAFT_10g029640 [Sorghum bicolor]
          Length = 429

 Score =  481 bits (1237), Expect = e-133
 Identities = 235/411 (57%), Positives = 300/411 (72%)
 Frame = +2

Query: 368  MEAVGLRPTLLCYTALIEALGNVGRTLEAESVFQEMVYFGVRPHLAVXXXXXXXXXXXXX 547
            M+A G RP+   Y  LI AL   GR LEAE++  EM   G RP  A              
Sbjct: 1    MQASGGRPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAH 60

Query: 548  XXXXXRVLKVMDEMGTDRSREIFETLLDYYVNAGRLSDTWFIIGQMRKRGYALSSFVYSR 727
                 R+L  M + G  R+R  +  LL  Y  AGRL D+W+++G+MR+RG  L +  YS 
Sbjct: 61   LRLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSM 120

Query: 728  VIGLYRDNGMWKKAMGVVDEMKELGVPMDRQIYNSIIDTFGKYGQLEDALQVFVKMQKEG 907
            ++ LYRDNGMWKKA+ +V EM+E+GV +D +IY+ +IDTFGKYGQL DA +VF KM+ EG
Sbjct: 121  LVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEG 180

Query: 908  VKPDITTWNLLIKWHCVCGDVNRALGLFGQMQEEGLYPDPKIFVTMISRLAERGKWDLLR 1087
            +KPDI+TWN LI+WHC  G++ RAL  F  MQEEG+YPDPKIFV +ISRL E+GKWD ++
Sbjct: 181  IKPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIK 240

Query: 1088 QSFEKMKFKGHETSGAIYAVLVDIYGQYGRFHDAEECICALKAEGVPMLPHIFCVLANAY 1267
            + F+ MK +G + SGA+YAVLVDIYGQYG F DA ECI AL+AE + + P +FCVLANAY
Sbjct: 241  KLFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAY 300

Query: 1268 AHQGLCEQTVKVLSIMEEEGIEPNLIMLNVLINAFGIAGRHKEALSIYHHIIESGISPDV 1447
            A QGLCEQTV VL +MEEEG EPNL+MLN+LINAFG AGRH EAL+++ HI +SG+SPDV
Sbjct: 301  AQQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDV 360

Query: 1448 ITYTTVMKAFMRAKQFSQIPELYQEMVSAGCSPDRKARELLNAAVMALEHR 1600
            +TYTT+MK FMRAK+F ++ E+Y+EM  AGC+PDRKARE+L+ A + LE R
Sbjct: 361  VTYTTLMKTFMRAKKFEKVSEVYREMERAGCTPDRKAREMLHDATVVLEQR 411



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 61/252 (24%), Positives = 108/252 (42%)
 Frame = +2

Query: 275  GKEISSELYSNVIASLCKKGYVDKAMKLVSEMEAVGLRPTLLCYTALIEALGNVGRTLEA 454
            G E+  ++YS +I +  K G +  A ++  +M A G++P +  + ALI+    VG    A
Sbjct: 145  GVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTWNALIQWHCRVGNMKRA 204

Query: 455  ESVFQEMVYFGVRPHLAVXXXXXXXXXXXXXXXXXXRVLKVMDEMGTDRSREIFETLLDY 634
               F  M   G+ P   +                  ++   M   G   S  ++  L+D 
Sbjct: 205  LRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLVDI 264

Query: 635  YVNAGRLSDTWFIIGQMRKRGYALSSFVYSRVIGLYRDNGMWKKAMGVVDEMKELGVPMD 814
            Y   G   D    I  +R     LS  V+  +   Y   G+ ++ + V+  M+E G   +
Sbjct: 265  YGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQTVNVLQLMEEEGFEPN 324

Query: 815  RQIYNSIIDTFGKYGQLEDALQVFVKMQKEGVKPDITTWNLLIKWHCVCGDVNRALGLFG 994
              + N +I+ FG  G+  +AL VF  ++  G+ PD+ T+  L+K         +   ++ 
Sbjct: 325  LVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYR 384

Query: 995  QMQEEGLYPDPK 1030
            +M+  G  PD K
Sbjct: 385  EMERAGCTPDRK 396


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