BLASTX nr result
ID: Rheum21_contig00016345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016345
(200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253... 62 6e-08
gb|EXB75634.1| Far upstream element-binding protein 3 [Morus not... 59 7e-07
ref|XP_004291145.1| PREDICTED: uncharacterized protein LOC101291... 59 9e-07
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici... 57 2e-06
ref|XP_006478397.1| PREDICTED: far upstream element-binding prot... 55 1e-05
ref|XP_006478396.1| PREDICTED: far upstream element-binding prot... 55 1e-05
ref|XP_006441655.1| hypothetical protein CICLE_v10018931mg [Citr... 55 1e-05
gb|EOY17112.1| KH domain-containing protein, putative isoform 2 ... 55 1e-05
gb|EOY17111.1| KH domain-containing protein, putative isoform 1 ... 55 1e-05
>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Frame = +1
Query: 13 PGYPPQVASSQPVAGYGQPG----PGYSQA-----YGQYPPQTQQAYSNQTPASAASYGY 165
PGYP Q QP++GY QPG PGY+Q YG YP +Q Y+ Q A+ A+YGY
Sbjct: 636 PGYPQQ--GGQPMSGYSQPGGQQAPGYAQVGPQGGYGPYP--SQPGYAEQQTANNAAYGY 691
Query: 166 QGQADP-------SAYGA 198
QG ADP SAYGA
Sbjct: 692 QGSADPTYNSGPASAYGA 709
>gb|EXB75634.1| Far upstream element-binding protein 3 [Morus notabilis]
Length = 761
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 16/77 (20%)
Frame = +1
Query: 16 GYPPQVASSQPVAGYGQPGP----GYSQ-----AYGQYPPQTQQAYSNQTPASAASYGYQ 168
GYP Q QPVA YGQPG GY Q AYGQYP +QQ Y+ Q+ + A YGYQ
Sbjct: 624 GYPQQ--GGQPVASYGQPGSQQAAGYPQGGPTAAYGQYP-SSQQGYAEQSAPTTAGYGYQ 680
Query: 169 GQADP-------SAYGA 198
DP SAYGA
Sbjct: 681 TSQDPSYGSAPASAYGA 697
>ref|XP_004291145.1| PREDICTED: uncharacterized protein LOC101291690 [Fragaria vesca
subsp. vesca]
Length = 818
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/63 (55%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 GYPPQVASSQPVAGYGQPGPGYSQA---YGQYPPQTQQAYSNQTPASAASYGYQGQADPS 186
GYP Q QP A YGQP PGY+QA Y QYP TQQ Y Q + YGYQG DP
Sbjct: 685 GYPQQ--GGQP-ASYGQPAPGYAQAPAGYAQYPT-TQQGYPEQPASYTGGYGYQGSQDP- 739
Query: 187 AYG 195
AYG
Sbjct: 740 AYG 742
>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 798
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Frame = +1
Query: 13 PGYPPQVASSQPVAGYGQPGPGYSQAYGQYP-------PQTQQAYSNQTPASAASYGYQG 171
PGYP Q + Q VA YGQPG + AY Q P P +QQAY Q ++A YGYQG
Sbjct: 661 PGYPQQ--AGQSVASYGQPGGQQASAYVQGPSGGYGSYPSSQQAYPEQPAQNSAGYGYQG 718
Query: 172 QADPS 186
DP+
Sbjct: 719 SQDPA 723
>ref|XP_006478397.1| PREDICTED: far upstream element-binding protein 2-like isoform X2
[Citrus sinensis]
Length = 784
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +1
Query: 13 PGYPPQVASSQPVAGYGQPGPGYSQAYGQYPP--------QTQQAYSNQTPASAASYGYQ 168
PGYP Q + Q V Y QPG + +YGQ P TQQAY Q S A YGYQ
Sbjct: 648 PGYPQQ--AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 705
Query: 169 GQADPSAYGA 198
G DPS YG+
Sbjct: 706 GTQDPS-YGS 714
>ref|XP_006478396.1| PREDICTED: far upstream element-binding protein 2-like isoform X1
[Citrus sinensis]
Length = 785
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +1
Query: 13 PGYPPQVASSQPVAGYGQPGPGYSQAYGQYPP--------QTQQAYSNQTPASAASYGYQ 168
PGYP Q + Q V Y QPG + +YGQ P TQQAY Q S A YGYQ
Sbjct: 649 PGYPQQ--AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 706
Query: 169 GQADPSAYGA 198
G DPS YG+
Sbjct: 707 GTQDPS-YGS 715
>ref|XP_006441655.1| hypothetical protein CICLE_v10018931mg [Citrus clementina]
gi|557543917|gb|ESR54895.1| hypothetical protein
CICLE_v10018931mg [Citrus clementina]
Length = 785
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +1
Query: 13 PGYPPQVASSQPVAGYGQPGPGYSQAYGQYPP--------QTQQAYSNQTPASAASYGYQ 168
PGYP Q + Q V Y QPG + +YGQ P TQQAY Q S A YGYQ
Sbjct: 649 PGYPQQ--AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 706
Query: 169 GQADPSAYGA 198
G DPS YG+
Sbjct: 707 GTQDPS-YGS 715
>gb|EOY17112.1| KH domain-containing protein, putative isoform 2 [Theobroma cacao]
Length = 652
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/69 (47%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Frame = +1
Query: 19 YPPQVASSQPVAGYGQPGPGYSQAY---------GQYPPQTQQAYSNQTPASAASYGYQG 171
YP Q SQPV GY QP + AY GQYPP +QQ YS Q + A YGYQG
Sbjct: 518 YPQQ--GSQPVPGYSQPSAQQATAYAPASTAAGYGQYPP-SQQGYSEQPAPTNAGYGYQG 574
Query: 172 QADPSAYGA 198
DP+ GA
Sbjct: 575 AQDPAYGGA 583
>gb|EOY17111.1| KH domain-containing protein, putative isoform 1 [Theobroma cacao]
Length = 763
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/69 (47%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Frame = +1
Query: 19 YPPQVASSQPVAGYGQPGPGYSQAY---------GQYPPQTQQAYSNQTPASAASYGYQG 171
YP Q SQPV GY QP + AY GQYPP +QQ YS Q + A YGYQG
Sbjct: 629 YPQQ--GSQPVPGYSQPSAQQATAYAPASTAAGYGQYPP-SQQGYSEQPAPTNAGYGYQG 685
Query: 172 QADPSAYGA 198
DP+ GA
Sbjct: 686 AQDPAYGGA 694