BLASTX nr result
ID: Rheum21_contig00016250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016250
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006482712.1| PREDICTED: probable ubiquitin conjugation fa... 161 7e-38
ref|XP_006431253.1| hypothetical protein CICLE_v10010958mg [Citr... 161 7e-38
ref|XP_006431252.1| hypothetical protein CICLE_v10010958mg [Citr... 161 7e-38
ref|XP_006431250.1| hypothetical protein CICLE_v10010958mg [Citr... 161 7e-38
ref|XP_006431249.1| hypothetical protein CICLE_v10010958mg [Citr... 161 7e-38
ref|XP_006431248.1| hypothetical protein CICLE_v10010958mg [Citr... 161 7e-38
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa... 160 1e-37
gb|ABG89128.1| UFD2 [synthetic construct] 160 1e-37
ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabi... 160 1e-37
gb|EOY03576.1| U-box domain-containing protein isoform 1 [Theobr... 159 3e-37
ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation fa... 159 4e-37
ref|XP_006289759.1| hypothetical protein CARUB_v10003359mg [Caps... 158 6e-37
ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis... 158 8e-37
gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus n... 157 1e-36
ref|XP_006400061.1| hypothetical protein EUTSA_v10012542mg [Eutr... 157 1e-36
ref|XP_002324089.1| U-box domain-containing family protein [Popu... 157 1e-36
ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation fa... 157 2e-36
ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation fa... 157 2e-36
gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus pe... 156 3e-36
ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Popu... 155 4e-36
>ref|XP_006482712.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Citrus
sinensis]
Length = 1049
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 559 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 618
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 619 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 653
>ref|XP_006431253.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533310|gb|ESR44493.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 732
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 289 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 348
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 349 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 383
>ref|XP_006431252.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533309|gb|ESR44492.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 779
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 289 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 348
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 349 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 383
>ref|XP_006431250.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|567877323|ref|XP_006431251.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
gi|557533307|gb|ESR44490.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
gi|557533308|gb|ESR44491.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 564
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 74 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 133
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 134 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 168
>ref|XP_006431249.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533306|gb|ESR44489.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 1049
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 559 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 618
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 619 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 653
>ref|XP_006431248.1| hypothetical protein CICLE_v10010958mg [Citrus clementina]
gi|557533305|gb|ESR44488.1| hypothetical protein
CICLE_v10010958mg [Citrus clementina]
Length = 1002
Score = 161 bits (408), Expect = 7e-38
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 559 DGDLIQHALSFYRLMIVWLVDLVGGFKMPLPDTCPMEFACMPEHFVEDAMELLIFASRIP 618
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +YIRNPYLR+KMV
Sbjct: 619 KALDGVLLDDFMNFIIMFMASPKYIRNPYLRSKMV 653
>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
product [Vitis vinifera]
Length = 1037
Score = 160 bits (406), Expect = 1e-37
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG L+QHALSFYRLMVV L+ L+GGFKMPLPSTCP EFACM HFVEDAMELLIFA +IP
Sbjct: 547 DGTLLQHALSFYRLMVVWLVRLIGGFKMPLPSTCPMEFACMPEHFVEDAMELLIFASRIP 606
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS +IRNPYLRAKMV
Sbjct: 607 KALDGVLLDDFMNFIIMFMASPNFIRNPYLRAKMV 641
>gb|ABG89128.1| UFD2 [synthetic construct]
Length = 1037
Score = 160 bits (406), Expect = 1e-37
Identities = 79/95 (83%), Positives = 85/95 (89%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG IQ ALSFYRLMVV L+GLVGGFKMPLPSTCP EF+CM HFVEDAMELLIFA +IP
Sbjct: 549 DGDFIQRALSFYRLMVVWLVGLVGGFKMPLPSTCPMEFSCMPEHFVEDAMELLIFASRIP 608
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV LD+FMNFIIMFMAS EY+RNPYLRAKMV
Sbjct: 609 KALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMV 643
>ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabidopsis thaliana]
gi|75174048|sp|Q9LF41.1|UBE4_ARATH RecName:
Full=Probable ubiquitin conjugation factor E4; AltName:
Full=Plant U-box protein 1; AltName: Full=U-box
domain-containing protein 1; AltName:
Full=Ubiquitin-fusion degradation protein 2-like;
Short=UB fusion protein 2-like
gi|9755795|emb|CAC01739.1| ubiquitin-fusion degradation
protein-like [Arabidopsis thaliana]
gi|332004773|gb|AED92156.1| putative ubiquitin
conjugation factor E4 [Arabidopsis thaliana]
Length = 1038
Score = 160 bits (406), Expect = 1e-37
Identities = 79/95 (83%), Positives = 85/95 (89%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG IQ ALSFYRLMVV L+GLVGGFKMPLPSTCP EF+CM HFVEDAMELLIFA +IP
Sbjct: 549 DGDFIQRALSFYRLMVVWLVGLVGGFKMPLPSTCPMEFSCMPEHFVEDAMELLIFASRIP 608
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV LD+FMNFIIMFMAS EY+RNPYLRAKMV
Sbjct: 609 KALDGVPLDDFMNFIIMFMASPEYVRNPYLRAKMV 643
>gb|EOY03576.1| U-box domain-containing protein isoform 1 [Theobroma cacao]
gi|508711680|gb|EOY03577.1| U-box domain-containing
protein isoform 1 [Theobroma cacao]
Length = 1042
Score = 159 bits (403), Expect = 3e-37
Identities = 77/95 (81%), Positives = 86/95 (90%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLMV+ L+GLVGGFKMPLPSTCP EFA M HFVEDAMELLIF+ +IP
Sbjct: 553 DGALIQHALSFYRLMVIWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFSSRIP 612
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
ALDGV+LD+FMNFIIMFMAS ++I+NPYLRAKMV
Sbjct: 613 RALDGVLLDDFMNFIIMFMASPQFIKNPYLRAKMV 647
>ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
lycopersicum]
Length = 1040
Score = 159 bits (402), Expect = 4e-37
Identities = 79/95 (83%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DGGL+Q ALSFYRLMVV L+GLVGGFKMPLP CP EFA M HFVEDAMELLIFA +IP
Sbjct: 551 DGGLLQRALSFYRLMVVWLVGLVGGFKMPLPCPCPMEFASMPEHFVEDAMELLIFASRIP 610
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
ALDGV+LD+FMNFIIMFMAS EYIRNPYLRAKMV
Sbjct: 611 RALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMV 645
>ref|XP_006289759.1| hypothetical protein CARUB_v10003359mg [Capsella rubella]
gi|482558465|gb|EOA22657.1| hypothetical protein
CARUB_v10003359mg [Capsella rubella]
Length = 1038
Score = 158 bits (400), Expect = 6e-37
Identities = 77/95 (81%), Positives = 85/95 (89%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG IQ ALSFYRL+VV L+ LVGGFKMPLPSTCP EF+CM HFVEDAMELLIFA +IP
Sbjct: 549 DGDFIQRALSFYRLVVVWLVRLVGGFKMPLPSTCPMEFSCMPEHFVEDAMELLIFASRIP 608
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS EY+RNPYLRAKMV
Sbjct: 609 KALDGVVLDDFMNFIIMFMASPEYVRNPYLRAKMV 643
>ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319559|gb|EFH49981.1| U-box domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1038
Score = 158 bits (399), Expect = 8e-37
Identities = 78/95 (82%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG IQ ALSFYRL+VV L+GL GGFKMPLPSTCP EF+CM HFVEDAMELLIFA +IP
Sbjct: 549 DGDFIQRALSFYRLVVVWLVGLAGGFKMPLPSTCPMEFSCMPEHFVEDAMELLIFASRIP 608
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV LD+FMNFIIMFMAS EYIRNPYLRAKMV
Sbjct: 609 KALDGVPLDDFMNFIIMFMASPEYIRNPYLRAKMV 643
>gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
Length = 1070
Score = 157 bits (398), Expect = 1e-36
Identities = 77/95 (81%), Positives = 85/95 (89%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQ A+SFYRLMVV L+G+VGGFKMPLP+TCP EFACM HFVEDAMELLIFA +IP
Sbjct: 574 DGTLIQCAVSFYRLMVVWLVGMVGGFKMPLPATCPEEFACMPEHFVEDAMELLIFASRIP 633
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ LDGV+LD+FMNFIIMFMAS YIRNPYLRAKMV
Sbjct: 634 KVLDGVLLDDFMNFIIMFMASPNYIRNPYLRAKMV 668
>ref|XP_006400061.1| hypothetical protein EUTSA_v10012542mg [Eutrema salsugineum]
gi|557101151|gb|ESQ41514.1| hypothetical protein
EUTSA_v10012542mg [Eutrema salsugineum]
Length = 1036
Score = 157 bits (398), Expect = 1e-36
Identities = 76/95 (80%), Positives = 85/95 (89%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG IQ ALSFYRL+VV L+GLVGGFKMPLPS CP EF+CM HFVEDAMELLIF+ +IP
Sbjct: 548 DGDFIQRALSFYRLVVVWLVGLVGGFKMPLPSICPMEFSCMPEHFVEDAMELLIFSSRIP 607
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS EY+RNPYLRAKMV
Sbjct: 608 KALDGVLLDDFMNFIIMFMASPEYVRNPYLRAKMV 642
>ref|XP_002324089.1| U-box domain-containing family protein [Populus trichocarpa]
gi|222867091|gb|EEF04222.1| U-box domain-containing
family protein [Populus trichocarpa]
Length = 1019
Score = 157 bits (397), Expect = 1e-36
Identities = 78/95 (82%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQHALSFYRLM+V L+ LVGGFKMPLP TCP EFA M HFVEDAMELLIFA +IP
Sbjct: 530 DGALIQHALSFYRLMLVWLVNLVGGFKMPLPLTCPKEFASMPEHFVEDAMELLIFASRIP 589
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS YIRNPYLRAKMV
Sbjct: 590 KALDGVLLDDFMNFIIMFMASPTYIRNPYLRAKMV 624
>ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
tuberosum]
Length = 1019
Score = 157 bits (396), Expect = 2e-36
Identities = 77/95 (81%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DGGL+Q ALSFYRLM+V L+GLVGGFKMPLPS CP EFA M HFVED MELL FA +IP
Sbjct: 550 DGGLLQRALSFYRLMLVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDTMELLSFASRIP 609
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
EALDGV+LD+FMNFII+FMAS EYIRNPYLRAKMV
Sbjct: 610 EALDGVLLDDFMNFIILFMASPEYIRNPYLRAKMV 644
>ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
tuberosum]
Length = 1040
Score = 157 bits (396), Expect = 2e-36
Identities = 78/95 (82%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DGGL+Q ALSFYRLMVV L+ LVGGFKMPLPS CP EF+ M HFVEDAMELLIFA +IP
Sbjct: 551 DGGLLQRALSFYRLMVVWLVELVGGFKMPLPSPCPMEFSSMPEHFVEDAMELLIFASRIP 610
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
ALDGV+LD+FMNFIIMFMAS EYIRNPYLRAKMV
Sbjct: 611 RALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMV 645
>gb|EMJ16113.1| hypothetical protein PRUPE_ppa000705mg [Prunus persica]
Length = 1028
Score = 156 bits (394), Expect = 3e-36
Identities = 79/95 (83%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQ ALSFYRLMVV L+ LVGGFKMPLP TCP EFA M HFVEDAMELLIFA +IP
Sbjct: 539 DGTLIQSALSFYRLMVVWLVRLVGGFKMPLPLTCPTEFASMPEHFVEDAMELLIFASRIP 598
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS EYIRNPYLRAKMV
Sbjct: 599 KALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMV 633
>ref|XP_006384301.1| hypothetical protein POPTR_0004s12060g [Populus trichocarpa]
gi|550340866|gb|ERP62098.1| hypothetical protein
POPTR_0004s12060g [Populus trichocarpa]
Length = 1020
Score = 155 bits (393), Expect = 4e-36
Identities = 77/95 (81%), Positives = 84/95 (88%)
Frame = +1
Query: 22 DGGLIQHALSFYRLMVVRLIGLVGGFKMPLPSTCPAEFACMLGHFVEDAMELLIFAPQIP 201
DG LIQ ALSFYRLM+V L+ LVGGFKMPLPSTCP EFA M HFVEDAMEL+IFA +IP
Sbjct: 531 DGALIQRALSFYRLMLVWLVSLVGGFKMPLPSTCPKEFASMPEHFVEDAMELIIFASRIP 590
Query: 202 EALDGVILDEFMNFIIMFMASREYIRNPYLRAKMV 306
+ALDGV+LD+FMNFIIMFMAS YIRNPYLRAKMV
Sbjct: 591 KALDGVLLDDFMNFIIMFMASPTYIRNPYLRAKMV 625