BLASTX nr result
ID: Rheum21_contig00016172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016172
(649 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatu... 110 1e-29
ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloro... 103 2e-29
ref|XP_006453553.1| hypothetical protein CICLE_v10009792mg [Citr... 113 3e-29
ref|XP_006474054.1| PREDICTED: 50S ribosomal protein L35, chloro... 113 4e-29
gb|ESW26853.1| hypothetical protein PHAVU_003G153700g [Phaseolus... 110 7e-28
ref|NP_001237080.1| uncharacterized protein LOC100305559 [Glycin... 102 2e-27
sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, ... 105 3e-27
gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK4623... 108 3e-27
ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycin... 106 8e-27
ref|XP_004507765.1| PREDICTED: 50S ribosomal protein L35, chloro... 107 3e-26
ref|XP_006294929.1| hypothetical protein CARUB_v10023983mg [Caps... 107 4e-26
gb|ABK93832.1| unknown [Populus trichocarpa] 106 4e-26
gb|EOY31511.1| 50S ribosomal protein L35 isoform 2 [Theobroma ca... 110 8e-26
ref|NP_850047.1| ribosomal protein L35 [Arabidopsis thaliana] gi... 107 1e-25
emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana] 107 1e-25
ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloro... 105 2e-25
ref|XP_002324518.2| ribosomal protein L35 [Populus trichocarpa] ... 106 3e-25
ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata su... 107 4e-25
ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloro... 103 5e-25
gb|EMJ24866.1| hypothetical protein PRUPE_ppa012843mg [Prunus pe... 101 7e-25
>ref|XP_003610263.1| 50S ribosomal protein L35 [Medicago truncatula]
gi|217071304|gb|ACJ84012.1| unknown [Medicago
truncatula] gi|355511318|gb|AES92460.1| 50S ribosomal
protein L35 [Medicago truncatula]
gi|388495356|gb|AFK35744.1| unknown [Medicago
truncatula]
Length = 148
Score = 110 bits (276), Expect(2) = 1e-29
Identities = 54/66 (81%), Positives = 60/66 (90%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG+GKI+RRRAGKQHLL KKN KRKLR SKM+QVNR+DYDNVIG LPYL
Sbjct: 82 THKASAKRFRVTGAGKIVRRRAGKQHLLYKKNKKRKLRLSKMIQVNRSDYDNVIGALPYL 141
Query: 459 KVNRSA 476
KVNR A
Sbjct: 142 KVNRKA 147
Score = 45.4 bits (106), Expect(2) = 1e-29
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 TTSIRISHGGI-GLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYPLAIVAD 258
+TS R+S + F N ++ LKL+ S SIS+ PIL Q S V + + L IV+
Sbjct: 22 STSTRVSFSSVKSPFSNNVNSLKLNWSCSISA----PILNQNHSIVTTSPRS--LTIVSA 75
Query: 259 KGYKMKTHKRRRRR 300
KGYKMKTHK +R
Sbjct: 76 KGYKMKTHKASAKR 89
>ref|XP_004146668.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Cucumis
sativus] gi|449503151|ref|XP_004161859.1| PREDICTED: 50S
ribosomal protein L35, chloroplastic-like [Cucumis
sativus]
Length = 151
Score = 103 bits (256), Expect(2) = 2e-29
Identities = 51/67 (76%), Positives = 58/67 (86%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKN KR+LR SKM V+R+DYDNVIG LPYL
Sbjct: 85 THKASAKRFRVTGRGKIVRRRAGKQHLLCKKNAKRRLRLSKMHPVSRSDYDNVIGALPYL 144
Query: 459 KVNRSAK 479
KVNR A+
Sbjct: 145 KVNRQAQ 151
Score = 52.8 bits (125), Expect(2) = 2e-29
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +1
Query: 76 CFTTSIRISHGGIGLFH-NKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQ-RYPLAI 249
C S R+SH +G+ NK++ LKLS S++IS G LQ S + Q R P +
Sbjct: 18 CSRPSFRVSHTSVGIASVNKVNSLKLSSSHNISGFGFNS--LQKPSHISPTSQIRTPFTV 75
Query: 250 VADKGYKMKTHKRRRRR 300
A KGYKMKTHK +R
Sbjct: 76 FAAKGYKMKTHKASAKR 92
>ref|XP_006453553.1| hypothetical protein CICLE_v10009792mg [Citrus clementina]
gi|557556779|gb|ESR66793.1| hypothetical protein
CICLE_v10009792mg [Citrus clementina]
Length = 151
Score = 113 bits (283), Expect(2) = 3e-29
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM +V+R+DYDNVIGCLPYL
Sbjct: 85 THKASAKRFRVTGKGKILRRRAGKQHLLAKKNTKRKLRLSKMHEVSRSDYDNVIGCLPYL 144
Query: 459 KVNRSAK 479
KVNR AK
Sbjct: 145 KVNRQAK 151
Score = 41.6 bits (96), Expect(2) = 3e-29
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 82 TTSIRISHGG---IGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP--LA 246
++S+R S G + L + + L+L+ SYSIS+ P+L + + + Q P +
Sbjct: 18 SSSVRASRGSSLRLALSNKLNNSLRLNSSYSISAS---PLLFRHNNLPTTVTQNRPQTVT 74
Query: 247 IVADKGYKMKTHKRRRRR 300
+ A KGYKMKTHK +R
Sbjct: 75 VFAAKGYKMKTHKASAKR 92
>ref|XP_006474054.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Citrus
sinensis]
Length = 158
Score = 113 bits (283), Expect(2) = 4e-29
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM +V+R+DYDNVIGCLPYL
Sbjct: 92 THKASAKRFRVTGKGKILRRRAGKQHLLAKKNTKRKLRLSKMHEVSRSDYDNVIGCLPYL 151
Query: 459 KVNRSAK 479
KVNR AK
Sbjct: 152 KVNRQAK 158
Score = 41.2 bits (95), Expect(2) = 4e-29
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 82 TTSIRISHGG---IGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP--LA 246
++S+R S G + L + + L+L+ SYSIS+ P+L + + + Q P +
Sbjct: 25 SSSVRASRGSSLQLALSNKLNNSLRLNSSYSISAS---PLLFRHNNFPTTVTQNRPQTVT 81
Query: 247 IVADKGYKMKTHKRRRRR 300
+ A KGYKMKTHK +R
Sbjct: 82 VFAAKGYKMKTHKASAKR 99
>gb|ESW26853.1| hypothetical protein PHAVU_003G153700g [Phaseolus vulgaris]
Length = 143
Score = 110 bits (274), Expect(2) = 7e-28
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLLVKKNTKRKLR SKM V+R+DYDNVIG LPYL
Sbjct: 77 THKASAKRFRVTGRGKIVRRRAGKQHLLVKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL 136
Query: 459 KVNRSAK 479
KVNR+AK
Sbjct: 137 KVNRNAK 143
Score = 40.4 bits (93), Expect(2) = 7e-28
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 76 CFTTSIRISHGGIGL-FHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYPLAIV 252
C ++ R+S+ + N + L LS S SIS+ +R L S + L+ PL IV
Sbjct: 11 CSSSFTRLSYTSVRFPALNNTNLLNLSSSASISAPLLRQKLCTAPSPLSPTLR--PLTIV 68
Query: 253 ADKGYKMKTHKRRRRR 300
+ KGYKMKTHK +R
Sbjct: 69 SAKGYKMKTHKASAKR 84
>ref|NP_001237080.1| uncharacterized protein LOC100305559 [Glycine max]
gi|255625911|gb|ACU13300.1| unknown [Glycine max]
Length = 147
Score = 102 bits (255), Expect(2) = 2e-27
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+ RRAGKQHLLVKKNTKRK R SKM V+R+DYDNVIG LPYL
Sbjct: 81 THKASAKRFRVTGRGKIVCRRAGKQHLLVKKNTKRKSRLSKMHAVSRSDYDNVIGALPYL 140
Query: 459 KVNRSA 476
KVNR+A
Sbjct: 141 KVNRNA 146
Score = 46.6 bits (109), Expect(2) = 2e-27
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 76 CFTTSIRISHGGIGL-FHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVS--CLQRYPLA 246
C+T R+S+G + N + LKLS S +ISS PIL Q V S L+ PL
Sbjct: 18 CYT---RVSYGSVRFPVLNNANPLKLSSSANISS----PILHQKLCTVPSPLALRPRPLT 70
Query: 247 IVADKGYKMKTHKRRRRR 300
IV+ KGYKMKTHK +R
Sbjct: 71 IVSAKGYKMKTHKASAKR 88
>sp|P23326.1|RK35_SPIOL RecName: Full=50S ribosomal protein L35, chloroplastic; AltName:
Full=CL35; Flags: Precursor gi|189096153|pdb|3BBO|5
Chain 5, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|170139|gb|AAA34043.1| ribosomal
protein L35 [Spinacia oleracea]
Length = 159
Score = 105 bits (263), Expect(2) = 3e-27
Identities = 51/64 (79%), Positives = 58/64 (90%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRK R SK++QV+R+DYDNVIG LPYL
Sbjct: 94 THKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKNRLSKLIQVDRSDYDNVIGALPYL 153
Query: 459 KVNR 470
KVNR
Sbjct: 154 KVNR 157
Score = 42.7 bits (99), Expect(2) = 3e-27
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Frame = +1
Query: 109 GIGLFH-NKM--SQLKLSCSYSISSCGIRPILLQTK--SAVVSCLQRYP--LAIVADKGY 267
GI L H NK S L LS S SISS ++PI+L+ K S V S + + A KGY
Sbjct: 31 GISLTHFNKQLKSTLNLSSSSSISSSKVQPIVLKNKRISTVDSSVSTSSPSFTVFAAKGY 90
Query: 268 KMKTHKRRRRR 300
KMKTHK +R
Sbjct: 91 KMKTHKASAKR 101
>gb|AFK37785.1| unknown [Lotus japonicus] gi|388516355|gb|AFK46239.1| unknown
[Lotus japonicus]
Length = 148
Score = 108 bits (269), Expect(2) = 3e-27
Identities = 54/66 (81%), Positives = 59/66 (89%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM VNR+DYDNVIG LPYL
Sbjct: 82 THKASAKRFRVTGKGKIVRRRAGKQHLLQKKNTKRKLRLSKMHPVNRSDYDNVIGALPYL 141
Query: 459 KVNRSA 476
KVNR+A
Sbjct: 142 KVNRNA 147
Score = 40.0 bits (92), Expect(2) = 3e-27
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 76 CFTTSIRISHGGIGLF-HNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYPLAIV 252
C ++ R+S+ + L +K + +KLS S IS+ PI Q K V+ L IV
Sbjct: 19 CSSSPTRLSYASVRLPPSHKTNSVKLSSSACIST----PIF-QQKLCTVTPPSSRSLTIV 73
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYKMKTHK +R
Sbjct: 74 AAKGYKMKTHKASAKR 89
>ref|NP_001235661.1| uncharacterized protein LOC100306481 [Glycine max]
gi|255628681|gb|ACU14685.1| unknown [Glycine max]
Length = 138
Score = 106 bits (264), Expect(2) = 8e-27
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLLVKKNTKRK R SKM V+R+DYDNVIG LPYL
Sbjct: 72 THKASAKRFRVTGQGKIVRRRAGKQHLLVKKNTKRKSRLSKMHAVSRSDYDNVIGALPYL 131
Query: 459 KVNRSA 476
KVNR+A
Sbjct: 132 KVNRNA 137
Score = 40.8 bits (94), Expect(2) = 8e-27
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +1
Query: 136 SQLKLSCSYSISSCGIRPILLQTKSAVVSCL----QRYPLAIVADKGYKMKTHKRRRRR 300
+ LKLS S SIS+ PIL Q +++S L + PL IV+ KGYKMKTHK +R
Sbjct: 25 NSLKLSSSASIST----PILQQKLCSLLSPLPLSPRPRPLTIVSAKGYKMKTHKASAKR 79
>ref|XP_004507765.1| PREDICTED: 50S ribosomal protein L35, chloroplastic-like [Cicer
arietinum]
Length = 147
Score = 107 bits (267), Expect(2) = 3e-26
Identities = 53/66 (80%), Positives = 59/66 (89%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTGSGKI+RRRAGKQHLL KKN KRKLR SKM+QV+R+DYDNVI LPYL
Sbjct: 81 THKASAKRFRVTGSGKIVRRRAGKQHLLYKKNNKRKLRLSKMIQVDRSDYDNVIRALPYL 140
Query: 459 KVNRSA 476
KVNR A
Sbjct: 141 KVNRKA 146
Score = 37.7 bits (86), Expect(2) = 3e-26
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 TTSIRISHGGIGL-FHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYPLAIVAD 258
++S R+S+ + L N ++ L LS S +IS+ P L Q + V S + L IV+
Sbjct: 21 SSSTRVSYSSVKLPLSNNVNSLHLSWSGTISA----PFLHQKLATVTSPPRS--LTIVSA 74
Query: 259 KGYKMKTHKRRRRR 300
KGYK+KTHK +R
Sbjct: 75 KGYKIKTHKASAKR 88
>ref|XP_006294929.1| hypothetical protein CARUB_v10023983mg [Capsella rubella]
gi|482563637|gb|EOA27827.1| hypothetical protein
CARUB_v10023983mg [Capsella rubella]
Length = 233
Score = 107 bits (268), Expect(2) = 4e-26
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRR+GKQHLL KKN KRKLR SKM +VNR+DYDNVIG LPYL
Sbjct: 167 THKASAKRFRVTGKGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGALPYL 226
Query: 459 KVNRSA 476
KVNR A
Sbjct: 227 KVNRKA 232
Score = 37.0 bits (84), Expect(2) = 4e-26
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 79 FTTSIRISHGGIGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVS--CLQRYPLAIV 252
F+ +R S + L + LS S+SIS G+R +L Q S V S + +
Sbjct: 101 FSHPLRSSSPKVSLRSSVQFATSLSSSHSIS--GLRAVLPQKISIVASPNSQKLQTFTVF 158
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYK+KTHK +R
Sbjct: 159 AHKGYKLKTHKASAKR 174
>gb|ABK93832.1| unknown [Populus trichocarpa]
Length = 150
Score = 106 bits (265), Expect(2) = 4e-26
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM V+R+DYDNVIG LPYL
Sbjct: 84 THKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL 143
Query: 459 KVNRSA 476
KVNR A
Sbjct: 144 KVNRKA 149
Score = 38.1 bits (87), Expect(2) = 4e-26
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 88 SIRISHGGIGLFH-NKM-SQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP-LAIVAD 258
S R+S+G L NK+ S L+LS +IS G R + ++ S QR+ L + A
Sbjct: 20 STRVSYGSAQLAPLNKVNSSLRLSSCRNIS--GSRSLSPLKPCSITSLTQRFQSLTVFAA 77
Query: 259 KGYKMKTHKRRRRR 300
KGYKMKTHK +R
Sbjct: 78 KGYKMKTHKASAKR 91
>gb|EOY31511.1| 50S ribosomal protein L35 isoform 2 [Theobroma cacao]
Length = 154
Score = 110 bits (275), Expect(2) = 8e-26
Identities = 55/67 (82%), Positives = 60/67 (89%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM V+RNDYDNVIG LPYL
Sbjct: 88 THKASAKRFRVTGRGKIVRRRAGKQHLLAKKNTKRKLRLSKMHAVSRNDYDNVIGALPYL 147
Query: 459 KVNRSAK 479
KVNR+AK
Sbjct: 148 KVNRNAK 154
Score = 33.1 bits (74), Expect(2) = 8e-26
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 82 TTSIRISHGGIGL--FHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP-LAIV 252
++S R+S + L F+ LKLS + +IS G + + QR L +
Sbjct: 22 SSSTRLSRDSLQLPQFNKLGKALKLSSTQNIS--GFPSFVSYKLCTITPAPQRLQSLTVF 79
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYKMKTHK +R
Sbjct: 80 AAKGYKMKTHKASAKR 95
>ref|NP_850047.1| ribosomal protein L35 [Arabidopsis thaliana]
gi|17529002|gb|AAL38711.1| putative chloroplast
ribosomal protein L35 [Arabidopsis thaliana]
gi|20465445|gb|AAM20182.1| putative chloroplast
ribosomal protein L35 [Arabidopsis thaliana]
gi|330252434|gb|AEC07528.1| ribosomal protein L35
[Arabidopsis thaliana]
Length = 145
Score = 107 bits (267), Expect(2) = 1e-25
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRR+GKQHLL KKN KRKLR SKM +VNR+DYDNVIG LPYL
Sbjct: 79 THKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGALPYL 138
Query: 459 KVNRSA 476
KVNR A
Sbjct: 139 KVNRKA 144
Score = 35.4 bits (80), Expect(2) = 1e-25
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 79 FTTSIRISHGGIGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVS--CLQRYPLAIV 252
F +R S + L + LS S+SIS G+R +L S V S + + +
Sbjct: 13 FCHPLRSSSPKVSLRSSVHFATSLSSSHSIS--GLRAVLPLKISTVASPNSQKLHSFTVF 70
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYKMKTHK +R
Sbjct: 71 AHKGYKMKTHKASAKR 86
>emb|CAA60774.1| ribosomal protein L35 [Arabidopsis thaliana]
Length = 140
Score = 107 bits (267), Expect(2) = 1e-25
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRR+GKQHLL KKN KRKLR SKM +VNR+DYDNVIG LPYL
Sbjct: 74 THKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGALPYL 133
Query: 459 KVNRSA 476
KVNR A
Sbjct: 134 KVNRKA 139
Score = 35.4 bits (80), Expect(2) = 1e-25
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 79 FTTSIRISHGGIGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVS--CLQRYPLAIV 252
F +R S + L + LS S+SIS G+R +L S V S + + +
Sbjct: 8 FCHPLRSSSPKVSLRSSVHFATSLSSSHSIS--GLRAVLPLKISTVASPNSQKLHSFTVF 65
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYKMKTHK +R
Sbjct: 66 AHKGYKMKTHKASAKR 81
>ref|XP_002267813.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
vinifera] gi|147785813|emb|CAN77631.1| hypothetical
protein VITISV_001803 [Vitis vinifera]
gi|147799145|emb|CAN63703.1| hypothetical protein
VITISV_039205 [Vitis vinifera]
Length = 153
Score = 105 bits (261), Expect(2) = 2e-25
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKN KR+LR SKM V+R+DYDNVIG LPYL
Sbjct: 87 THKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGALPYL 146
Query: 459 KVNRSAK 479
KVNR AK
Sbjct: 147 KVNREAK 153
Score = 37.4 bits (85), Expect(2) = 2e-25
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 127 NKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP--LAIVADKGYKMKTHKRRRRR 300
++ LKLS S +IS G PIL S + S P L +V+ KGYKMKTHK +R
Sbjct: 37 SRACSLKLSSSRNIS--GFAPILPLRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKR 94
>ref|XP_002324518.2| ribosomal protein L35 [Populus trichocarpa]
gi|550318499|gb|EEF03083.2| ribosomal protein L35
[Populus trichocarpa]
Length = 150
Score = 106 bits (265), Expect(2) = 3e-25
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKNTKRKLR SKM V+R+DYDNVIG LPYL
Sbjct: 84 THKASAKRFRVTGKGKIVRRRAGKQHLLAKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL 143
Query: 459 KVNRSA 476
KVNR A
Sbjct: 144 KVNRKA 149
Score = 35.0 bits (79), Expect(2) = 3e-25
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +1
Query: 94 RISHGGIGL--FHNKMSQLKLSCSYSISSCG-IRPILLQTKSAVVSCLQRYP-LAIVADK 261
R+S+G L S L+LS +IS G + P+ ++ S QR+ L + A K
Sbjct: 22 RVSYGSAQLAPLIKVNSSLRLSSCRNISGSGSLSPL---KPCSITSLTQRFQSLTVFAAK 78
Query: 262 GYKMKTHKRRRRR 300
GYKMKTHK +R
Sbjct: 79 GYKMKTHKASAKR 91
>ref|XP_002878721.1| ribosomal protein L35 [Arabidopsis lyrata subsp. lyrata]
gi|297324560|gb|EFH54980.1| ribosomal protein L35
[Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 107 bits (267), Expect(2) = 4e-25
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRR+GKQHLL KKN KRKLR SKM +VNR+DYDNVIG LPYL
Sbjct: 74 THKASAKRFRVTGRGKIVRRRSGKQHLLAKKNNKRKLRLSKMTEVNRSDYDNVIGALPYL 133
Query: 459 KVNRSA 476
KVNR A
Sbjct: 134 KVNRKA 139
Score = 33.9 bits (76), Expect(2) = 4e-25
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 79 FTTSIRISHGGIGLFHNKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQR--YPLAIV 252
F +R S + L + L+ S+SIS G+R + Q S V S + +
Sbjct: 8 FCRPLRSSSPKVSLRSSVQFATSLASSHSIS--GLRAVFPQKISTVASPNSQKFQSFTVF 65
Query: 253 ADKGYKMKTHKRRRRR 300
A KGYK+KTHK +R
Sbjct: 66 AHKGYKLKTHKASAKR 81
>ref|XP_002264584.1| PREDICTED: 50S ribosomal protein L35, chloroplastic [Vitis
vinifera]
Length = 153
Score = 103 bits (257), Expect(2) = 5e-25
Identities = 51/67 (76%), Positives = 57/67 (85%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLL KKN KR+LR SKM V+R+DYDNVIG LPYL
Sbjct: 87 THKASAKRFRVTGRGKIVRRRAGKQHLLAKKNAKRRLRLSKMHPVSRSDYDNVIGALPYL 146
Query: 459 KVNRSAK 479
KVNR K
Sbjct: 147 KVNREVK 153
Score = 37.4 bits (85), Expect(2) = 5e-25
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 127 NKMSQLKLSCSYSISSCGIRPILLQTKSAVVSCLQRYP--LAIVADKGYKMKTHKRRRRR 300
++ LKLS S +IS G PIL S + S P L +V+ KGYKMKTHK +R
Sbjct: 37 SRACSLKLSSSRNIS--GFAPILPLRHSTLNSPSPSQPSSLTVVSAKGYKMKTHKASAKR 94
>gb|EMJ24866.1| hypothetical protein PRUPE_ppa012843mg [Prunus persica]
Length = 152
Score = 101 bits (251), Expect(2) = 7e-25
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = +3
Query: 279 SQEASAKRFRVTGSGKIMRRRAGKQHLLVKKNTKRKLRPSKMVQVNRNDYDNVIGCLPYL 458
+ +ASAKRFRVTG GKI+RRRAGKQHLLVKKN KR+ R SKM V+R+DY+NVIG LPYL
Sbjct: 86 THKASAKRFRVTGRGKIVRRRAGKQHLLVKKNAKRRTRLSKMHAVSRSDYNNVIGALPYL 145
Query: 459 KVNRSAK 479
KVNR A+
Sbjct: 146 KVNRKAE 152
Score = 39.3 bits (90), Expect(2) = 7e-25
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 94 RISHGGIGLFH-NKMSQLKLSCSYSISSCGIRPILLQTKSAVVSC-LQRYPLAIVADKGY 267
++S G + L N+ + L LS S+SIS G+ +L + S L+ L IV+ KGY
Sbjct: 25 QLSRGSVQLAQFNRPNSLGLSSSHSIS--GLASLLPHRLCTIASSPLRPRSLTIVSAKGY 82
Query: 268 KMKTHKRRRRR 300
KMKTHK +R
Sbjct: 83 KMKTHKASAKR 93