BLASTX nr result
ID: Rheum21_contig00016150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00016150
(249 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008802487.1| succinate dehydrogenase subunit 3 (mitochond... 104 1e-20
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola... 104 1e-20
ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita... 103 2e-20
ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus... 103 2e-20
ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vin... 102 7e-20
ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochond... 101 9e-20
ref|XP_006358200.1| PREDICTED: succinate dehydrogenase cytochrom... 101 1e-19
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta... 101 1e-19
dbj|BAO50873.1| succinate dehydrogenase subunit 3 (mitochondrion... 99 6e-19
ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica pa... 98 1e-18
gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion)... 97 3e-18
gb|AEN56102.1| succinate dehydrogenase subunit 3 [Cucumis melo s... 96 5e-18
gb|EPS74711.1| succinate dehydrogenase subunit 3, partial [Genli... 95 8e-18
ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochond... 95 1e-17
ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis s... 94 1e-17
ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygr... 93 3e-17
ref|XP_002300314.2| hypothetical protein POPTR_0001s29170g [Popu... 87 2e-15
gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitoc... 87 2e-15
gb|AHA47113.1| succinate dehydrogenase subunit 3 (mitochondrion)... 84 3e-14
dbj|BAJ22105.1| succinate dehydrogenase cytochrome subunit 3 [Cy... 84 3e-14
>ref|YP_008802487.1| succinate dehydrogenase subunit 3 (mitochondrion) [Asclepias
syriaca] gi|556562358|gb|AGZ63054.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Asclepias
syriaca]
Length = 109
Score = 104 bits (260), Expect = 1e-20
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = +1
Query: 34 NELESNMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
N ++ NILRPLSPHLPIYKPQLTSTFSIFHRISGAF TIVLFFYLLCLKIGLIC T
Sbjct: 6 NSKKNKFNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLVTIVLFFYLLCLKIGLICFT 64
>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
Length = 108
Score = 104 bits (259), Expect = 1e-20
Identities = 50/53 (94%), Positives = 50/53 (94%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAF ATIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFT 53
>ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita pepo]
gi|259156837|gb|ACV96698.1| succinate dehydrogenase
subunit 3 [Cucurbita pepo]
Length = 105
Score = 103 bits (258), Expect = 2e-20
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAF AT+VLFFYLLCLK+GLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFT 53
>ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|295311667|ref|YP_003587234.1| succinate dehydrogenase
subunit 3 [Citrullus lanatus]
gi|259156794|gb|ACV96656.1| succinate dehydrogenase
subunit 3 [Citrullus lanatus]
gi|259156795|gb|ACV96657.1| succinate dehydrogenase
subunit 3 [Citrullus lanatus]
Length = 95
Score = 103 bits (258), Expect = 2e-20
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAF AT+VLFFYLLCLK+GLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFT 53
>ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
gi|209954150|emb|CAQ77586.1| succinate dehydrogenase
subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1|
succinate dehydrogenase subunit 3 [Vitis vinifera]
Length = 168
Score = 102 bits (253), Expect = 7e-20
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = +1
Query: 34 NELESNMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
N + + NILRPLSPHLPIYKPQLTSTF I+HRISGAF AT+VLFFYLLCLKIGLIC T
Sbjct: 56 NLINNRKNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVLFFYLLCLKIGLICFT 114
>ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
guttatus] gi|340007673|gb|AEK26537.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Mimulus
guttatus]
Length = 111
Score = 101 bits (252), Expect = 9e-20
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1
Query: 31 KNELESNMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
K +++ MNILRPLSPHLPIYKPQLTSTF I HRISGAF ATI+ FFYLLCLKIGLIC T
Sbjct: 2 KKKIQPKMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATILFFFYLLCLKIGLICFT 61
>ref|XP_006358200.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit-like
[Solanum tuberosum]
Length = 108
Score = 101 bits (251), Expect = 1e-19
Identities = 49/53 (92%), Positives = 49/53 (92%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTFSI HRISGAF ATIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFT 53
>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57013992|ref|YP_173464.1| succinate dehydrogenase
subunit 3 [Nicotiana tabacum]
gi|57014032|ref|YP_173503.1| succinate dehydrogenase
subunit 3 [Nicotiana tabacum]
gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
Length = 108
Score = 101 bits (251), Expect = 1e-19
Identities = 49/53 (92%), Positives = 49/53 (92%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTFSI HRISGAF ATIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFT 53
>dbj|BAO50873.1| succinate dehydrogenase subunit 3 (mitochondrion) [Hevea
brasiliensis] gi|584592186|dbj|BAO50937.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Hevea
brasiliensis]
Length = 118
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/53 (90%), Positives = 48/53 (90%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTF I HRISGAF ATIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVCFFYLLCLKIGLICFT 53
>ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya]
gi|170522372|gb|ACB20482.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Carica papaya]
Length = 108
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/53 (88%), Positives = 47/53 (88%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTF I HRISGAF ATIVLFFYL CLKIG IC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLFCLKIGFICFT 53
>gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion) [Utricularia
gibba]
Length = 104
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTF I +RISGAF ATIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISNRISGAFLATIVFFFYLLCLKIGLICFT 53
>gb|AEN56102.1| succinate dehydrogenase subunit 3 [Cucumis melo subsp. melo]
Length = 100
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYK QLTSTF I HRISGAF AT+VLFFYLLCLK+GLIC T
Sbjct: 1 MNILRPLSPHLPIYKAQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFT 53
>gb|EPS74711.1| succinate dehydrogenase subunit 3, partial [Genlisea aurea]
Length = 97
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTF I +RISGAF TIV FFYLLCLKIGLIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISNRISGAFLTTIVFFFYLLCLKIGLICFT 53
>ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochondrion) [Ricinus
communis] gi|322394268|gb|ADW96025.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Ricinus
communis]
Length = 103
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTST+ I HRISGAF ATIV FFY+LCLKI LIC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTYPISHRISGAFLATIVFFFYVLCLKISLICFT 53
>ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
gi|325305594|gb|ADZ10763.1| succinate dehydrogenase
subunit 3 [Cucumis sativus]
Length = 105
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYK QLTSTF I HRISGAF AT+V FFYLLCLK+GLIC T
Sbjct: 1 MNILRPLSPHLPIYKAQLTSTFPISHRISGAFLATLVFFFYLLCLKMGLICFT 53
>ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygrometrica]
gi|340549504|gb|AEK53325.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Boea hygrometrica]
Length = 150
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNILRPLSPHLPIYKPQLTSTF I HRISGAF ATIVLFF+LL LKIG IC T
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFHLLYLKIGFICFT 53
>ref|XP_002300314.2| hypothetical protein POPTR_0001s29170g [Populus trichocarpa]
gi|550348451|gb|EEE85119.2| hypothetical protein
POPTR_0001s29170g [Populus trichocarpa]
Length = 282
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/62 (67%), Positives = 49/62 (79%)
Frame = +1
Query: 19 EEQSKNELESNMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGL 198
E S + + MNILRPLSPHLPIY+PQ+ STFSI +RISGAF +TIVL FY +CLK GL
Sbjct: 179 EMTSDIDQHNTMNILRPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGL 238
Query: 199 IC 204
IC
Sbjct: 239 IC 240
>gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
[Nymphaea tetragona]
Length = 79
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = +1
Query: 67 PLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
PLSPHLPIYKPQLTSTF I HRISGAF TIVLF YLLCLKIGLIC T
Sbjct: 1 PLSPHLPIYKPQLTSTFPISHRISGAFLVTIVLFSYLLCLKIGLICFT 48
>gb|AHA47113.1| succinate dehydrogenase subunit 3 (mitochondrion) [Amborella
trichopoda]
Length = 131
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
M+I RPL PHL IYKPQLTSTFSIFHRISGAF AT+VLF L CLKIGLI T
Sbjct: 1 MSIKRPLPPHLTIYKPQLTSTFSIFHRISGAFLATMVLFSSLFCLKIGLISFT 53
>dbj|BAJ22105.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis]
Length = 130
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = +1
Query: 52 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFPATIVLFFYLLCLKIGLICLT 210
MNI RPLSPHL IYKPQLTSTFSI HRISGAF AT+VLF L CL+IGLI T
Sbjct: 1 MNINRPLSPHLTIYKPQLTSTFSILHRISGAFLATMVLFSLLFCLEIGLISFT 53