BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00015742
         (1900 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi...   501   e-139
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   478   e-132
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]     476   e-131
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   470   e-130
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   470   e-130
gb|EMJ15730.1| hypothetical protein PRUPE_ppa014874mg, partial [...   469   e-129
ref|XP_002305195.1| pentatricopeptide repeat-containing family p...   457   e-126
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi...   456   e-125
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr...   454   e-125
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
gb|EOY14229.1| Pentatricopeptide repeat (PPR) superfamily protei...   441   e-121
gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protei...   441   e-121
gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protei...   441   e-121
gb|EOY14226.1| Pentatricopeptide repeat superfamily protein, put...   441   e-121
gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, put...   441   e-121
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-116
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...   415   e-113
ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutr...   415   e-113
ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Caps...   412   e-112

>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 553

 Score =  501 bits (1290), Expect = e-139
 Identities = 236/425 (55%), Positives = 332/425 (78%), Gaps = 1/425 (0%)
 Frame = +1

Query: 628  IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKN 807
            + +++CD  R+G NW+ LS+ F+S++LND++VE VLLE K+P +AKRAL FF W+AH K+
Sbjct: 39   LVTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKS 98

Query: 808  FEHKIKPYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDNLLDTYKDADSCPF 984
            ++H +  YS+ IHI V+ARL+ DA ALIESVL+++ G ++   +VD+LLDTY  ADS P 
Sbjct: 99   YQHNLCSYSVTIHILVQARLLVDARALIESVLEKHIGDDSRFSVVDSLLDTYNVADSIPL 158

Query: 985  VFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYG 1164
            VFDL+VQ YSK+R+ + AF++C YL++ GF  SLISFN L+HV+ KS+   + L+W++Y 
Sbjct: 159  VFDLLVQTYSKMRLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTKSD--RNDLVWRIYQ 216

Query: 1165 FMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDG 1344
             M E   Y NEAT++ +I ALCK G+LQ +VD+  RIHGK C PMV+VN SL+LR++ + 
Sbjct: 217  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 276

Query: 1345 RIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYT 1524
            RIEEG+++LKR+++KNM+ DT+ YSLIVYA++++GNLESA  VYE MLKRGFS NSFVYT
Sbjct: 277  RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYT 336

Query: 1525 AFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQK 1704
             FI  YCE G +EEA  L QEM++  LKPYDET++++++GCA+  +  ++LS CE+M+ +
Sbjct: 337  TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 396

Query: 1705 GMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEV 1884
             +LP+ + FNE++RRLCE G+ +QAN +LTL+LDKGFSP+E TYSHLI GY  +  ++EV
Sbjct: 397  KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 456

Query: 1885 LKLYY 1899
            LKLYY
Sbjct: 457  LKLYY 461



 Score = 83.2 bits (204), Expect = 4e-13
 Identities = 73/336 (21%), Positives = 147/336 (43%), Gaps = 5/336 (1%)
 Frame = +1

Query: 844  HITVRARLINDAC--ALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVF---DLVVQC 1008
            H+    R  N+A    LI ++ K  G + + ++  ++LD        P V     L+++ 
Sbjct: 217  HMLENIRYPNEATIRTLISALCK--GGQLQTYV--DMLDRIHGKRCSPMVIVNTSLILRI 272

Query: 1009 YSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVY 1188
              + R+ +    L R L K+      I+++ +++   K  + ES L+  VY  M +R   
Sbjct: 273  IQEERIEEGMVLLKRMLRKN-MIHDTIAYSLIVYAKVKMGNLESALV--VYEEMLKRGFS 329

Query: 1189 GNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLV 1368
             N       I A C+ G++++   +   +      P       L+       RIEE +  
Sbjct: 330  ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 389

Query: 1369 LKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCE 1548
             +++M + ++     ++ ++    + GN + A  +    L +GFSPN   Y+  I  Y +
Sbjct: 390  CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 449

Query: 1549 EGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNV 1728
            EG ++E + L+ EM+   + P    Y+ ++    + GK  +A    + M    ++P  ++
Sbjct: 450  EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 509

Query: 1729 FNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTY 1836
            +  LV    E G+  +A  +    + +G  P  T+Y
Sbjct: 510  YESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSY 544


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  478 bits (1230), Expect = e-132
 Identities = 237/464 (51%), Positives = 334/464 (71%), Gaps = 12/464 (2%)
 Frame = +1

Query: 544  ILFNLIQAPTKPP---CLWIHQLA---HVDSDRK-----IASSLCDFLRQGVNWNALSRH 690
            I+ +L+    K P   CL  HQ+     V +D K     I  ++CD LR+G NW +LS  
Sbjct: 7    IIPSLLSRQVKNPSDSCLCSHQILVTRFVHNDAKPDGDAIVYAICDSLRRGHNWVSLSGK 66

Query: 691  FSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVRARLI 870
            F  V LN  +VE+VLLE K+P +AKRAL FF W+A  KNF H +  Y + ++I VRA+L+
Sbjct: 67   FQYVELNHLLVEKVLLELKEPIDAKRALGFFHWSAQRKNFVHGVWSYCLMVNILVRAQLL 126

Query: 871  NDACALIESVLKRNGSET-EIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFEL 1047
            NDA AL+ES+LK+N  ++ E  IVD+LLD+YK   S P VF+L+VQ Y+KLR+ +  F++
Sbjct: 127  NDAQALLESILKKNVEDSSEFLIVDSLLDSYKIIVSSPLVFNLLVQAYAKLRLFEIGFKI 186

Query: 1048 CRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMIEAL 1227
            C YL++HGF  SL+SFN L+HV+QKS+  +  L+WK+Y  M  +R+Y NEAT++ MI AL
Sbjct: 187  CFYLEEHGFFLSLLSFNTLIHVVQKSD--QYPLVWKIYEHMIHKRIYPNEATIRTMINAL 244

Query: 1228 CKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDT 1407
            CK G+LQ FVD+  RIHGK C P+V++NA +V R+L +GR++ G+ +LK ++QKNM+LDT
Sbjct: 245  CKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMILDT 304

Query: 1408 VCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQE 1587
            V YSLIV+A++++GNL+SA +VYE MLKRGF+ NSFV+T  I  YC  G +E+A  LF E
Sbjct: 305  VAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGE 364

Query: 1588 MKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCEDGH 1767
            M +M L+PYDET++ +++GCA+ G+  + LS  E+MI++G++P+   FN+++ +LCE G 
Sbjct: 365  MGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGE 424

Query: 1768 VEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            V QAN  LT  LDKGFSPDETTYS+L+ GY     ++EVLKLYY
Sbjct: 425  VNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYY 468



 Score = 80.1 bits (196), Expect = 3e-12
 Identities = 54/248 (21%), Positives = 103/248 (41%)
 Frame = +1

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +VY  M +R    N     ++I A C  G+++K   +   +      P       L+   
Sbjct: 325  EVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGC 384

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               GR+EE +   ++++++ ++   + ++ ++    + G +  A      +L +GFSP+ 
Sbjct: 385  AKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCETGEVNQANTFLTRLLDKGFSPDE 444

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  +  Y  +  ++E + L+ EM+   L P                           
Sbjct: 445  TTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSP--------------------------- 477

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRN 1872
                G+L    VF  L+R LC  G +EQA K L +   +  +P +  Y  LI G+ +K +
Sbjct: 478  ----GLL----VFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSD 529

Query: 1873 VEEVLKLY 1896
                L+LY
Sbjct: 530  TARALQLY 537


>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
          Length = 829

 Score =  476 bits (1226), Expect = e-131
 Identities = 230/479 (48%), Positives = 340/479 (70%), Gaps = 10/479 (2%)
 Frame = +1

Query: 493  ELLLNPKMIFLLRKRCP-ILFNLIQAPTKPPCL--------WIHQLAHVDSDRKIASSLC 645
            ELL +   + LLR+  P ++F  +++P +  C          IH +    +   +  ++C
Sbjct: 159  ELLQHDADMSLLRQIVPSLIFKSLKSPWQLCCFNPRSEPSHLIHTVTKPIAPNNVVKAIC 218

Query: 646  DFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIK 825
            +  R G  W+ LSR F  +  N+ ++E++LLE KQP +AK AL FF WAAH  NF+H ++
Sbjct: 219  NAFRSGWTWDTLSREFHHIEFNEQLIEKILLELKQPIDAKWALGFFHWAAHRVNFQHCLR 278

Query: 826  PYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDNLLDTYKDADSCPFVFDLVV 1002
             Y +AIHI VRARL  DA ALIE+VLK+N G  ++  +VD+LL  YK  DS PFVFDL+V
Sbjct: 279  SYCLAIHILVRARLNLDARALIETVLKKNAGDSSKFLVVDSLLSCYKITDSTPFVFDLLV 338

Query: 1003 QCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERR 1182
            Q YS+LRM DS F++C YL++HGF  +L+SFN  +HV++KS+  E+ ++W++Y  M  RR
Sbjct: 339  QSYSRLRMFDSGFDVCCYLEEHGFSLNLVSFNTFIHVVEKSD--ENTMVWRIYEHMIWRR 396

Query: 1183 VYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGV 1362
            +Y N++T++ +I +LCK G+LQK+V++  RIHG+ C P V+VN SLV ++  +GR+EEGV
Sbjct: 397  IYPNQSTIRTLISSLCKEGKLQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGV 456

Query: 1363 LVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTY 1542
            ++LKR++Q+NM+ DT+ YSLIVYA++++GN+ SAQ VYE MLKRGF  N FVYT FI+ Y
Sbjct: 457  VLLKRMLQRNMLFDTIAYSLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAY 516

Query: 1543 CEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNS 1722
            C+EG ++E   + ++M+ M LKPY+ETY+ +V+  A+ G+  ++L  CE M++KG +P+ 
Sbjct: 517  CKEGRIDETHCMMKDMEDMGLKPYEETYNSLVECYAKAGRLEESLRNCEVMMEKGFVPSC 576

Query: 1723 NVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
              FNE+V +LCE+G  E+AN +LT  L+KGFSP++ TY+ LI GY  K +VEEVLKL+Y
Sbjct: 577  AAFNEMVHKLCENGEAEKANAMLTRLLEKGFSPNDITYASLIVGYEKKGDVEEVLKLFY 635


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  470 bits (1210), Expect = e-130
 Identities = 234/462 (50%), Positives = 330/462 (71%), Gaps = 3/462 (0%)
 Frame = +1

Query: 523  LLRKRCPILFNL-IQAPTKPPCLWIHQLA--HVDSDRKIASSLCDFLRQGVNWNALSRHF 693
            LLR+  P L ++    PT+   L + QL     +S+ K+ + LCD LR+G+NW+AL++ F
Sbjct: 3    LLRRVIPSLISISTNNPTRTIHLHVPQLTLGETNSNSKV-NMLCDSLRRGLNWDALNQRF 61

Query: 694  SSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVRARLIN 873
             S+ L ++ V +VLLE K+P +AK+AL FF W+A CKN EH +  Y I IHI V A+L+ 
Sbjct: 62   GSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGLASYCITIHILVGAQLLM 121

Query: 874  DACALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCR 1053
            DA +L+ES LK+N   +   +VD+LL +Y    S P VFDL+VQ YSKLRM +  F++C 
Sbjct: 122  DAQSLLESTLKKNAG-SRFLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCC 180

Query: 1054 YLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMIEALCK 1233
            YL++HGF  SLISFN LLHV+QKS++    L+WK+Y  M   R Y NE +V +MI ALCK
Sbjct: 181  YLEEHGFSLSLISFNTLLHVVQKSDNYP--LVWKIYEHMIRVRKYPNEVSVSVMISALCK 238

Query: 1234 AGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVC 1413
             G LQKFVD+  RIHGK C P+V+VN  ++ RML +GR+E+G+L+LKRL+QKNM+LDT+ 
Sbjct: 239  EGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTIS 298

Query: 1414 YSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMK 1593
            YSLI YA+++ G L+SA +VYE ML RGF PN+FVYT FI ++C EG +EEA  L Q+M+
Sbjct: 299  YSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDME 358

Query: 1594 SMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVE 1773
            +  L PYDET+++++ GC++ G+  + L +CE M+Q+G++P+   FN +  +LCE G V+
Sbjct: 359  NAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVK 418

Query: 1774 QANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            +A+++LTL LDKGF PDE TYS+LI  Y     +++VLKLYY
Sbjct: 419  RADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYY 460



 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 56/260 (21%), Positives = 110/260 (42%)
 Frame = +1

Query: 1087 ISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVT 1266
            IS++ + +   K  + +S   W+VY  M  R  + N     + I + C  G +++  ++ 
Sbjct: 297  ISYSLIAYAKVKYGTLDSA--WEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELM 354

Query: 1267 SRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQI 1446
              +      P       L+      GR+EEG+ + +R+MQ+ ++     ++L+     + 
Sbjct: 355  QDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCES 414

Query: 1447 GNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETY 1626
            G ++ A ++   +L +GF P+   Y+  I +Y + G +++ + L+ EM+   L P     
Sbjct: 415  GVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP----- 469

Query: 1627 SIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLD 1806
                                      G+L     F  L+R LC+   +E+A K L +  D
Sbjct: 470  --------------------------GLL----AFESLIRSLCQCRKLEKAEKYLRIMKD 499

Query: 1807 KGFSPDETTYSHLIKGYRDK 1866
            +  +     Y  LI  Y +K
Sbjct: 500  RSIAISTCVYETLISSYFEK 519


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  470 bits (1210), Expect = e-130
 Identities = 234/462 (50%), Positives = 329/462 (71%), Gaps = 3/462 (0%)
 Frame = +1

Query: 523  LLRKRCPILFNL-IQAPTKPPCLWIHQLA--HVDSDRKIASSLCDFLRQGVNWNALSRHF 693
            LLR+  P L ++    PT+   L + QL     +S+ K+ + LCD LR+G+NW+AL++ F
Sbjct: 3    LLRRVIPSLISISTNNPTRTIHLHVPQLTLGETNSNSKV-NMLCDSLRRGLNWDALNQRF 61

Query: 694  SSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVRARLIN 873
             S+ L ++ V +VLLE K+P +AK+AL FF W+A CKN EH +  Y I IHI V A L+ 
Sbjct: 62   GSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHGVASYCITIHILVGAHLLM 121

Query: 874  DACALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCR 1053
            DA +L+ES LK+N   +   +VD+LL +Y    S P VFDL+VQ YSKLRM +  F++C 
Sbjct: 122  DAQSLLESTLKKNAG-SRFLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEICFDVCC 180

Query: 1054 YLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMIEALCK 1233
            YL++HGF  SLISFN LLHV+QKS++    L+WK+Y  M   R Y NE +V +MI ALCK
Sbjct: 181  YLEEHGFSLSLISFNXLLHVVQKSDNYP--LVWKIYEHMIRVRKYPNEVSVSVMISALCK 238

Query: 1234 AGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVC 1413
             G LQKFVD+  RIHGK C P+V+VN  ++ RML +GR+E+G+L+LKRL+QKNM+LDT+ 
Sbjct: 239  EGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTIS 298

Query: 1414 YSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMK 1593
            YSLI YA+++ G L+SA +VYE ML RGF PN+FVYT FI ++C EG +EEA  L Q+M+
Sbjct: 299  YSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDME 358

Query: 1594 SMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVE 1773
            +  L PYDET+++++ GC++ G+  + L +CE M+Q+G++P+   FN +  +LCE G V+
Sbjct: 359  NAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVK 418

Query: 1774 QANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            +A+++LTL LDKGF PDE TYS+LI  Y     +++VLKLYY
Sbjct: 419  RADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYY 460



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 57/260 (21%), Positives = 112/260 (43%)
 Frame = +1

Query: 1087 ISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVT 1266
            IS++ + +   K  + +S   W+VY  M  R  + N     + I + C  G +++  ++ 
Sbjct: 297  ISYSLIAYAKVKYGTLDSA--WEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELM 354

Query: 1267 SRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQI 1446
              +      P       L+      GR+EEG+ + +R+MQ+ ++     ++L+     + 
Sbjct: 355  QDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCES 414

Query: 1447 GNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETY 1626
            G ++ A ++   +L +GF P+   Y+  I +Y + G +++ + L+ EM+   L P     
Sbjct: 415  GVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP----- 469

Query: 1627 SIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLD 1806
                                      G+L    VF  ++R LC+   +E+A K L +  D
Sbjct: 470  --------------------------GLL----VFESIIRSLCQCRKLEKAEKYLRIMKD 499

Query: 1807 KGFSPDETTYSHLIKGYRDK 1866
            +  +     Y  LI GY +K
Sbjct: 500  RSIAISTCVYETLISGYFEK 519


>gb|EMJ15730.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
          Length = 499

 Score =  469 bits (1206), Expect = e-129
 Identities = 228/436 (52%), Positives = 319/436 (73%), Gaps = 2/436 (0%)
 Frame = +1

Query: 598  QLAHVDSDRK-IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRAL 774
            +L + DS  K +A ++ D  R   NW+ L+  F SV L+  +V+ VLLE K+P +AKRAL
Sbjct: 22   RLINTDSAPKDVAKAIRDSFRSSWNWDTLTTKFESVKLDGGLVDSVLLELKEPIDAKRAL 81

Query: 775  NFFRWAAHCKNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIF-IVDNLL 951
             FF WAAH K+FEH +  YSI IHI  RARL+ DA AL+ESVLK+       F +VD+LL
Sbjct: 82   GFFHWAAHRKSFEHGVWSYSITIHILARARLLMDARALLESVLKKTAENGSKFSVVDSLL 141

Query: 952  DTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSES 1131
             +Y+   S PFVFDL++Q Y+KLRM ++ F++C YL +HG   SLI++N LLHV+QKS+ 
Sbjct: 142  SSYEVTASNPFVFDLLLQAYAKLRMFETGFDVCCYLGEHGLPLSLITYNTLLHVVQKSD- 200

Query: 1132 CESGLIWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVN 1311
             ++ L+WK+Y  M  +R Y NE T+KI+I+ALCK G+L+K VD+  RIHGK C P V+VN
Sbjct: 201  -QTALVWKIYEHMVGKRNYPNEETIKILIDALCKEGKLKKCVDMLDRIHGKRCSPSVIVN 259

Query: 1312 ASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLK 1491
             SLV  +L  GR+EEG+++L+R++QKNM+LDT+ YSLIVYA++++G++ SA +VYE MLK
Sbjct: 260  TSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAYSLIVYAKVKLGDVCSAWEVYEEMLK 319

Query: 1492 RGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASD 1671
            RGF  NSFVYT F+  +CEEG +EEA  +  EM++MDLKP+DE+Y+++++GCA+ G+   
Sbjct: 320  RGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMENMDLKPFDESYNLLIEGCAKAGRVEA 379

Query: 1672 ALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIK 1851
            +LS  ++M++ G +P  + FNE+V +LCE G  EQAN + T+ LDKGF PD TTY HLI 
Sbjct: 380  SLSYLKKMVESGFIPCRSAFNEMVGKLCETGDAEQANTMFTILLDKGFLPDSTTYGHLID 439

Query: 1852 GYRDKRNVEEVLKLYY 1899
            GY  K  ++EV+KLYY
Sbjct: 440  GYGRKGEIQEVVKLYY 455


>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848159|gb|EEE85706.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 556

 Score =  457 bits (1177), Expect = e-126
 Identities = 224/438 (51%), Positives = 319/438 (72%), Gaps = 1/438 (0%)
 Frame = +1

Query: 589  WIHQLAHVDSDRKIASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKR 768
            ++H     +SD  + SS+CD LR+G NW+ L+R F S+ LN+ +V+ VLLE K+P +AKR
Sbjct: 34   FLHDGTKTESDT-VVSSICDSLRRGYNWDTLNRKFESLQLNNLLVKNVLLELKEPTDAKR 92

Query: 769  ALNFFRWAAHCKNFEHKIKPYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDN 945
            AL FF W+A  +NF H ++ Y + IHI ++ARLI DA AL+ES+LK++ G  T+  ++D+
Sbjct: 93   ALGFFHWSAR-RNFVHGVQSYCLMIHILIQARLIMDAQALLESLLKKSVGDPTKFLVLDS 151

Query: 946  LLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKS 1125
            LL +YK   S P VFDL+VQ Y+K RM +  F++C  L++H F  SLISFN L+HV+QKS
Sbjct: 152  LLSSYKIIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKS 211

Query: 1126 ESCESGLIWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVV 1305
            +  +S L WK+Y  M  RR Y NEAT++ MI ALCK G+LQ  V++  +IHGK C P+V+
Sbjct: 212  D--KSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVI 269

Query: 1306 VNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGM 1485
            VN  LV R+L +GR+E G+ +LK +++KNM+LDTV YSLIVYA++++GNL SA QVYE M
Sbjct: 270  VNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEM 329

Query: 1486 LKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKA 1665
            LKRGF+ NSFVYT+FI  YC+E  +EEA  L QEM++M LKPY +T++ +++GCA+ G+ 
Sbjct: 330  LKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRV 389

Query: 1666 SDALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHL 1845
             + LS C++M++ G +P+ + FNE+V +LC    V +AN++LT  LD+GF  DE TYS+L
Sbjct: 390  EETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNL 449

Query: 1846 IKGYRDKRNVEEVLKLYY 1899
            I GY     ++E+LKLYY
Sbjct: 450  ISGYAKNNQIQEMLKLYY 467



 Score = 68.9 bits (167), Expect = 7e-09
 Identities = 65/338 (19%), Positives = 138/338 (40%), Gaps = 2/338 (0%)
 Frame = +1

Query: 703  YLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVRARLINDAC 882
            Y N+A +E ++    +  + +  +N      H K     +   +  +   +    +    
Sbjct: 230  YPNEATIESMISALCKEGKLQTIVNMLD-KIHGKRCSPVVIVNTCLVFRILEEGRVEPGL 288

Query: 883  ALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLD 1062
            AL++ +L++N           +LDT          + L+V    KL  ++SA ++   + 
Sbjct: 289  ALLKMMLRKN----------MILDTV--------AYSLIVYAKVKLGNLNSAMQVYEEML 330

Query: 1063 KHGFCPSLISFNKLLHVIQKSESCESG--LIWKVYGFMTERRVYGNEATVKIMIEALCKA 1236
            K GF  +   +   +    K E  E    L+ ++       + YG+  T   ++E   KA
Sbjct: 331  KRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGL--KPYGD--TFNFLLEGCAKA 386

Query: 1237 GELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCY 1416
            G +++ +    ++      P +     +V ++     +     +L  L+ +  + D + Y
Sbjct: 387  GRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITY 446

Query: 1417 SLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKS 1596
            S ++    +   ++   ++Y  M  R  SP    +T+ I+  C  G +EEA    + M  
Sbjct: 447  SNLISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIG 506

Query: 1597 MDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGM 1710
              L P ++ Y  ++K    +G    AL++  EM+ KG+
Sbjct: 507  RSLNPREDVYEALIKVYFEKGDKRRALNLYNEMVSKGL 544



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 56/269 (20%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
 Frame = +1

Query: 811  EHKIKPYSIAIHITVRARLINDACA---LIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            E +++P    + + +R  +I D  A   ++ + +K     + + + + +L    +A+S  
Sbjct: 281  EGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANS-- 338

Query: 982  FVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVY 1161
            FV+   +  Y K   I+ A +L + ++  G  P   +FN LL    K+   E  L +   
Sbjct: 339  FVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKK 398

Query: 1162 GFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGD 1341
              M E     + +    M+  LC+  ++ +  ++ + +  +      +  ++L+     +
Sbjct: 399  --MMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKN 456

Query: 1342 GRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVY 1521
             +I+E + +   +  +++    + ++ ++      G LE A++    M+ R  +P   VY
Sbjct: 457  NQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVY 516

Query: 1522 TAFIQTYCEEGMVEEAINLFQEMKSMDLK 1608
             A I+ Y E+G    A+NL+ EM S  LK
Sbjct: 517  EALIKVYFEKGDKRRALNLYNEMVSKGLK 545


>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score =  456 bits (1174), Expect = e-125
 Identities = 223/436 (51%), Positives = 318/436 (72%), Gaps = 2/436 (0%)
 Frame = +1

Query: 598  QLAHVDSD-RKIASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRAL 774
            QL H +S    +  ++CD  + G +W+AL+  F+ V L+  +VE VLLE K P +AKRAL
Sbjct: 20   QLIHTNSTPNNVVRAICDSFKSGWSWDALTSKFACVKLDAKLVENVLLELKDPNDAKRAL 79

Query: 775  NFFRWAAHCKNFEHKIKPYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDNLL 951
             FF W +  K+F+H +  YSI IHI VRA++  DA AL+ESVLK+N G   +  +VD+LL
Sbjct: 80   GFFHWVSKRKDFDHGVWSYSITIHILVRAKMAMDARALMESVLKKNVGDSLKFSVVDSLL 139

Query: 952  DTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSES 1131
             +Y+   S PFVFDL+VQ Y+K+RM ++ F++C YL + G   SLIS+N LL V+++SE 
Sbjct: 140  SSYEVTASNPFVFDLLVQTYAKMRMFETGFDVCCYLRERGLPLSLISYNTLLRVVERSE- 198

Query: 1132 CESGLIWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVN 1311
              + L+WK+Y  M  RR Y NE TV+I+I+ALCK GEL+K+ D+  RIHGK C P V+VN
Sbjct: 199  -RNALVWKIYEHMVGRRSYPNEETVRILIDALCKEGELRKYADMLDRIHGKRCSPSVIVN 257

Query: 1312 ASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLK 1491
             SLV R+L +GR+EEG+++LKR++QKNM+LDT+ YSLIVYA++++ +L SAQQVYE MLK
Sbjct: 258  TSLVFRILEEGRVEEGMVLLKRMLQKNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLK 317

Query: 1492 RGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASD 1671
            RGF  NSFVYT FI+ +C+ G ++EA ++  EM +MDLKPYDE+Y+ +++GCA+ G+  +
Sbjct: 318  RGFRANSFVYTLFIEAHCKAGRIDEAQSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEE 377

Query: 1672 ALSICEEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIK 1851
            +++  ++M++   +P+   FNE+V +LCE G  +QAN +LT+ LDKGFSP+E TYS LI 
Sbjct: 378  SVNYMKQMMEIRFIPSLGAFNEMVGKLCEIGDADQANVMLTILLDKGFSPNEITYSLLID 437

Query: 1852 GYRDKRNVEEVLKLYY 1899
            GY  K   +EVLKL+Y
Sbjct: 438  GYARKGKSDEVLKLFY 453



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 3/330 (0%)
 Frame = +1

Query: 802  KNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            K +EH +   S     TVR         LI+++ K    E E+    ++LD        P
Sbjct: 205  KIYEHMVGRRSYPNEETVRI--------LIDALCK----EGELRKYADMLDRIHGKRCSP 252

Query: 982  FVF---DLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
             V     LV +   + R+ +    L R L K+    + I+++ +++   K E  + G   
Sbjct: 253  SVIVNTSLVFRILEEGRVEEGMVLLKRMLQKNMVLDT-IAYSLIVYAKVKLE--DLGSAQ 309

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +VY  M +R    N     + IEA CKAG + +   + + +   +  P       L+   
Sbjct: 310  QVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQSMMNEMGNMDLKPYDESYNFLIEGC 369

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               GR+EE V  +K++M+   +     ++ +V    +IG+ + A  +   +L +GFSPN 
Sbjct: 370  AKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGKLCEIGDADQANVMLTILLDKGFSPNE 429

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  I  Y  +G  +E + LF EM+S  L P    ++ ++K   + GK+ +A      
Sbjct: 430  ITYSLLIDGYARKGKSDEVLKLFYEMESRSLSPGMLVFTSLIKSFCQCGKSEEAKKYFRI 489

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQAN 1782
            M  + + P+ + +   +    E G+ E+A+
Sbjct: 490  MKDRSIAPSISTYEIFLANHFEQGNTERAD 519


>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
            gi|557532668|gb|ESR43851.1| hypothetical protein
            CICLE_v10011485mg [Citrus clementina]
          Length = 521

 Score =  454 bits (1167), Expect = e-125
 Identities = 222/425 (52%), Positives = 310/425 (72%), Gaps = 1/425 (0%)
 Frame = +1

Query: 628  IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKN 807
            + +++CD  R+G NW+ LS+ F+S++LND++VE VLLE K+P +AKRAL FF W+AH K+
Sbjct: 39   LVTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKRALGFFHWSAHHKS 98

Query: 808  FEHKIKPYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDNLLDTYKDADSCPF 984
            ++H +  YS+ IHI VRARL+ DA ALIESVL+++ G ++   +VD+LLDTY  ADS P 
Sbjct: 99   YQHNLCSYSVTIHILVRARLLVDARALIESVLEKHIGDDSRFSVVDSLLDTYNVADSIPL 158

Query: 985  VFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYG 1164
            VFDL+VQ YSK+R+ + AF++CRYL++ GF  SLISFN L+HV+ KS+  +         
Sbjct: 159  VFDLLVQTYSKMRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDL-------- 210

Query: 1165 FMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDG 1344
                                      LQ +VD+  RIHGK C PMV+VN SL+LR++ + 
Sbjct: 211  --------------------------LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 244

Query: 1345 RIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYT 1524
            RIEEG+++LKR+++KNM+ DT+ YSLIVYA++++ NLESA  VYE MLKRGFS NSFVYT
Sbjct: 245  RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 304

Query: 1525 AFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQK 1704
             FI  YCE G +EEA  L QEM++  LKPYDET++++++GCA+  +  ++LS CE+M+ +
Sbjct: 305  TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 364

Query: 1705 GMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEV 1884
             +LP+ + FNE++RRLCE G+V+QAN +LTL+LDKGFSP+E TYSHLI GY  +  ++EV
Sbjct: 365  KLLPSCSAFNEMIRRLCECGNVKQANGMLTLALDKGFSPNEMTYSHLIGGYAKEGEIQEV 424

Query: 1885 LKLYY 1899
            LKLYY
Sbjct: 425  LKLYY 429



 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 3/249 (1%)
 Frame = +1

Query: 988  FDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGF 1167
            + L+V    K+R ++SA  +   + K GF     S N  ++       CE G I +    
Sbjct: 268  YSLIVYAKVKMRNLESALVVYEEMLKRGF-----SANSFVYTTFIGAYCEYGKIEEANCL 322

Query: 1168 MTERRVYG---NEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLG 1338
            M E    G    + T  ++IE   KA  +++ +    ++  +   P       ++ R+  
Sbjct: 323  MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 382

Query: 1339 DGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFV 1518
             G +++   +L   + K    + + YS ++    + G ++   ++Y  M  +  SP    
Sbjct: 383  CGNVKQANGMLTLALDKGFSPNEMTYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 442

Query: 1519 YTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMI 1698
            YT+ I + C+ G +EEA   F+ MKS  L P  + Y  +V     +G    AL +CEEM+
Sbjct: 443  YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKVKALHLCEEMV 502

Query: 1699 QKGMLPNSN 1725
             +G+ P+++
Sbjct: 503  SEGLKPSTS 511


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  447 bits (1151), Expect = e-123
 Identities = 221/467 (47%), Positives = 328/467 (70%), Gaps = 1/467 (0%)
 Frame = +1

Query: 502  LNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNAL 681
            L+P ++      C  + NLI  P     +         +D    +S+CD L +  +W+ L
Sbjct: 8    LSPIVLSSKISLCLSIRNLISIPVADKLI---------NDDATVNSICDSLTRRQSWDTL 58

Query: 682  SRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVRA 861
            SR F  + LND +V++VLL+F+QP +AKRAL FF W+A  KNF H  + + I IHI V+A
Sbjct: 59   SRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKRKNFNHGPQSFGIMIHILVKA 118

Query: 862  RLINDACALIESVLKRN-GSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSA 1038
            RL+ DA AL+ES+LK+N G+  +  +VD+L+D+Y+   S PFVFDL+VQ  +KLR+ID A
Sbjct: 119  RLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGSSPFVFDLLVQTCAKLRLIDFA 178

Query: 1039 FELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIMI 1218
              +C +L++ GF  SLISFN L+HV++KS+  ++  +WK+Y  M  +RVY N  TV+IMI
Sbjct: 179  LCVCSHLEERGFSLSLISFNTLIHVVEKSD--QNLKVWKIYEQMIRKRVYPNAITVRIMI 236

Query: 1219 EALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMM 1398
             +LCK G+LQ+  D+ +RIHG  C   ++VNA L+ R+L +GR+E+G+ +LKR++QKNM+
Sbjct: 237  NSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMV 296

Query: 1399 LDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINL 1578
            LD + YSLIVYA+++ G++ S  +V+E M +RGF  NSF+YT FI  +C  G VEEA  L
Sbjct: 297  LDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCL 356

Query: 1579 FQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLCE 1758
             QEM++M LKPY ET++++++GCA  G + + LS+CE+M+++G LP+ +VFN  + ++CE
Sbjct: 357  MQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICE 416

Query: 1759 DGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
             G V++AN +LT+ LDKGF PDETTY++LI GYR    ++E+LKLYY
Sbjct: 417  KGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYY 463


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  447 bits (1151), Expect = e-123
 Identities = 215/429 (50%), Positives = 316/429 (73%), Gaps = 1/429 (0%)
 Frame = +1

Query: 616  SDRKIASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAA 795
            +D    +S+CD L +  +W+ LSR F  + LND +V++VLL+F+QP +AKRAL FF W+A
Sbjct: 15   NDDATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSA 74

Query: 796  HCKNFEHKIKPYSIAIHITVRARLINDACALIESVLKRN-GSETEIFIVDNLLDTYKDAD 972
              KNF H  + + I IHI V+ARL+ DA AL+ES+LK+N G+  +  +VD+L+D+Y+   
Sbjct: 75   KRKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTG 134

Query: 973  SCPFVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
            S PFVFDL+VQ  +KLR+ID A  +C +L++ GF  SLISFN L+HV++KS+  E+  +W
Sbjct: 135  SSPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSD--ENLKVW 192

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            K+Y  M  +RVY N  TV+IMI +LCK G+LQ+  D+ +RIHG  C   ++VNA L+ R+
Sbjct: 193  KIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRI 252

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
            L +GR+E+G+ +LKR++QKNM+LD + YSLIVYA+++ G++ S  +V+E M +RGF  NS
Sbjct: 253  LEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANS 312

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
            F+YT FI  +C  G VEEA  L QEM++M LKPY ET++++++GCA  G + + LS+CE+
Sbjct: 313  FIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEK 372

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRN 1872
            M+++G LP+ +VFN  + ++CE G V++AN +LT+ LDKGF PDETTY++LI GYR    
Sbjct: 373  MLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGE 432

Query: 1873 VEEVLKLYY 1899
            ++E+LKLYY
Sbjct: 433  IQEILKLYY 441


>gb|EOY14229.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            5 [Theobroma cacao]
          Length = 504

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/468 (47%), Positives = 327/468 (69%), Gaps = 1/468 (0%)
 Frame = +1

Query: 499  LLNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNA 678
            LLN K+  LL     I  N   A  K   +  H L+ ++++  I +S+ D  ++  NW  
Sbjct: 3    LLNRKLGSLLVSTS-IHHNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGT 61

Query: 679  LSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVR 858
            L++ FSSV L  ++V+QVLL+ KQP  A+ ALNFF W+A  +NF+H+I  Y IAIHI V 
Sbjct: 62   LTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHILVH 121

Query: 859  ARLINDACALIESVLKRNGSE-TEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDS 1035
            A+ + +A  L+ S LK +  + T   I+++LL +Y    S   VFDL+VQ Y+KLRM++ 
Sbjct: 122  AKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLED 181

Query: 1036 AFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIM 1215
            AFE+C YL+ HGF  +L+SFN LLH I KS   E+ ++WKVY  M E+R Y NE T++ M
Sbjct: 182  AFEVCCYLENHGFSLTLLSFNALLHGILKSG--ENVMVWKVYEHMIEKRKYPNEITIRTM 239

Query: 1216 IEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNM 1395
            I ALCK G+LQ  VD+  +I GK C P+V+VN  LV +++ +GRIE+G+ +LKR++QKN+
Sbjct: 240  ISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNL 299

Query: 1396 MLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAIN 1575
            +LD++ YS +V+ ++++GNLE A +V+E MLKRGF  NSF++++FI+ Y E G + EA N
Sbjct: 300  ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 1576 LFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLC 1755
            + +EM++M LKPYDET++ +++GCA+ G+   ++  CEEMI++G++P+ + FNE+VR LC
Sbjct: 360  VLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLC 419

Query: 1756 EDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            E G  E AN +LTL LDKGF P+ETTYSHLI GY  + N+++V KLYY
Sbjct: 420  EIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYY 467


>gb|EOY14228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            4 [Theobroma cacao]
          Length = 569

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/468 (47%), Positives = 327/468 (69%), Gaps = 1/468 (0%)
 Frame = +1

Query: 499  LLNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNA 678
            LLN K+  LL     I  N   A  K   +  H L+ ++++  I +S+ D  ++  NW  
Sbjct: 3    LLNRKLGSLLVSTS-IHHNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGT 61

Query: 679  LSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVR 858
            L++ FSSV L  ++V+QVLL+ KQP  A+ ALNFF W+A  +NF+H+I  Y IAIHI V 
Sbjct: 62   LTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHILVH 121

Query: 859  ARLINDACALIESVLKRNGSE-TEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDS 1035
            A+ + +A  L+ S LK +  + T   I+++LL +Y    S   VFDL+VQ Y+KLRM++ 
Sbjct: 122  AKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLED 181

Query: 1036 AFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIM 1215
            AFE+C YL+ HGF  +L+SFN LLH I KS   E+ ++WKVY  M E+R Y NE T++ M
Sbjct: 182  AFEVCCYLENHGFSLTLLSFNALLHGILKSG--ENVMVWKVYEHMIEKRKYPNEITIRTM 239

Query: 1216 IEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNM 1395
            I ALCK G+LQ  VD+  +I GK C P+V+VN  LV +++ +GRIE+G+ +LKR++QKN+
Sbjct: 240  ISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNL 299

Query: 1396 MLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAIN 1575
            +LD++ YS +V+ ++++GNLE A +V+E MLKRGF  NSF++++FI+ Y E G + EA N
Sbjct: 300  ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 1576 LFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLC 1755
            + +EM++M LKPYDET++ +++GCA+ G+   ++  CEEMI++G++P+ + FNE+VR LC
Sbjct: 360  VLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLC 419

Query: 1756 EDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            E G  E AN +LTL LDKGF P+ETTYSHLI GY  + N+++V KLYY
Sbjct: 420  EIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYY 467



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 80/358 (22%), Positives = 143/358 (39%), Gaps = 3/358 (0%)
 Frame = +1

Query: 802  KNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            K +EH I+       IT+R  +I+  C            E ++ +V +LLD        P
Sbjct: 219  KVYEHMIEKRKYPNEITIRT-MISALC-----------KEGKLQVVVDLLDKILGKRCSP 266

Query: 982  FVF---DLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
             V     LV +   + R+ D    L R L K+    S I+++ ++H   K  + E  L W
Sbjct: 267  IVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS-IAYSFVVHTKLKLGNLE--LAW 323

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +V+  M +R    N       I A  ++G + +  +V   +      P       L+   
Sbjct: 324  EVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGC 383

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               G ++  V   + ++++ ++     ++ +V    +IG+ E+A  +   +L +GF PN 
Sbjct: 384  AKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNE 443

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  I  Y +EG +++   L+ EM+                                 
Sbjct: 444  TTYSHLIAGYGKEGNIQQVFKLYYEME--------------------------------- 470

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDK 1866
               K + P   VF  L+R LC  G +E+A + L +  D+     E  Y  LI G+ +K
Sbjct: 471  --YKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEK 526



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 3/281 (1%)
 Frame = +1

Query: 886  LIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDK 1065
            L+  V++    E  + ++  +L      DS  + F  VV    KL  ++ A+E+   + K
Sbjct: 274  LVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSF--VVHTKLKLGNLELAWEVHEEMLK 331

Query: 1066 HGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYG---NEATVKIMIEALCKA 1236
             GF  +   F+  +         ESG I +    + E    G    + T   +IE   KA
Sbjct: 332  RGFIANSFLFSSFIRAYS-----ESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKA 386

Query: 1237 GELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCY 1416
            GE++  V     +  +   P       +V  +   G  E    +L  ++ K  + +   Y
Sbjct: 387  GEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTY 446

Query: 1417 SLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKS 1596
            S ++    + GN++   ++Y  M  +  SP   V+T+ I+  C  G +EEA    + MK 
Sbjct: 447  SHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKD 506

Query: 1597 MDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPN 1719
              +   ++ Y  ++ G   +G  + A  I  EM+ +GM P+
Sbjct: 507  RSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKPH 547


>gb|EOY14227.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            3 [Theobroma cacao]
          Length = 563

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/468 (47%), Positives = 327/468 (69%), Gaps = 1/468 (0%)
 Frame = +1

Query: 499  LLNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNA 678
            LLN K+  LL     I  N   A  K   +  H L+ ++++  I +S+ D  ++  NW  
Sbjct: 3    LLNRKLGSLLVSTS-IHHNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGT 61

Query: 679  LSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVR 858
            L++ FSSV L  ++V+QVLL+ KQP  A+ ALNFF W+A  +NF+H+I  Y IAIHI V 
Sbjct: 62   LTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHILVH 121

Query: 859  ARLINDACALIESVLKRNGSE-TEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDS 1035
            A+ + +A  L+ S LK +  + T   I+++LL +Y    S   VFDL+VQ Y+KLRM++ 
Sbjct: 122  AKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLED 181

Query: 1036 AFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIM 1215
            AFE+C YL+ HGF  +L+SFN LLH I KS   E+ ++WKVY  M E+R Y NE T++ M
Sbjct: 182  AFEVCCYLENHGFSLTLLSFNALLHGILKSG--ENVMVWKVYEHMIEKRKYPNEITIRTM 239

Query: 1216 IEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNM 1395
            I ALCK G+LQ  VD+  +I GK C P+V+VN  LV +++ +GRIE+G+ +LKR++QKN+
Sbjct: 240  ISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNL 299

Query: 1396 MLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAIN 1575
            +LD++ YS +V+ ++++GNLE A +V+E MLKRGF  NSF++++FI+ Y E G + EA N
Sbjct: 300  ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 1576 LFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLC 1755
            + +EM++M LKPYDET++ +++GCA+ G+   ++  CEEMI++G++P+ + FNE+VR LC
Sbjct: 360  VLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLC 419

Query: 1756 EDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            E G  E AN +LTL LDKGF P+ETTYSHLI GY  + N+++V KLYY
Sbjct: 420  EIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYY 467



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 80/358 (22%), Positives = 143/358 (39%), Gaps = 3/358 (0%)
 Frame = +1

Query: 802  KNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            K +EH I+       IT+R  +I+  C            E ++ +V +LLD        P
Sbjct: 219  KVYEHMIEKRKYPNEITIRT-MISALC-----------KEGKLQVVVDLLDKILGKRCSP 266

Query: 982  FVF---DLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
             V     LV +   + R+ D    L R L K+    S I+++ ++H   K  + E  L W
Sbjct: 267  IVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS-IAYSFVVHTKLKLGNLE--LAW 323

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +V+  M +R    N       I A  ++G + +  +V   +      P       L+   
Sbjct: 324  EVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGC 383

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               G ++  V   + ++++ ++     ++ +V    +IG+ E+A  +   +L +GF PN 
Sbjct: 384  AKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNE 443

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  I  Y +EG +++   L+ EM+                                 
Sbjct: 444  TTYSHLIAGYGKEGNIQQVFKLYYEME--------------------------------- 470

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDK 1866
               K + P   VF  L+R LC  G +E+A + L +  D+     E  Y  LI G+ +K
Sbjct: 471  --YKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEK 526



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 3/281 (1%)
 Frame = +1

Query: 886  LIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDK 1065
            L+  V++    E  + ++  +L      DS  + F  VV    KL  ++ A+E+   + K
Sbjct: 274  LVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSF--VVHTKLKLGNLELAWEVHEEMLK 331

Query: 1066 HGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYG---NEATVKIMIEALCKA 1236
             GF  +   F+  +         ESG I +    + E    G    + T   +IE   KA
Sbjct: 332  RGFIANSFLFSSFIRAYS-----ESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKA 386

Query: 1237 GELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCY 1416
            GE++  V     +  +   P       +V  +   G  E    +L  ++ K  + +   Y
Sbjct: 387  GEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTY 446

Query: 1417 SLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKS 1596
            S ++    + GN++   ++Y  M  +  SP   V+T+ I+  C  G +EEA    + MK 
Sbjct: 447  SHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKD 506

Query: 1597 MDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPN 1719
              +   ++ Y  ++ G   +G  + A  I  EM+ +GM P+
Sbjct: 507  RSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKPH 547


>gb|EOY14226.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
            [Theobroma cacao]
          Length = 549

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/468 (47%), Positives = 327/468 (69%), Gaps = 1/468 (0%)
 Frame = +1

Query: 499  LLNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNA 678
            LLN K+  LL     I  N   A  K   +  H L+ ++++  I +S+ D  ++  NW  
Sbjct: 3    LLNRKLGSLLVSTS-IHHNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGT 61

Query: 679  LSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVR 858
            L++ FSSV L  ++V+QVLL+ KQP  A+ ALNFF W+A  +NF+H+I  Y IAIHI V 
Sbjct: 62   LTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHILVH 121

Query: 859  ARLINDACALIESVLKRNGSE-TEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDS 1035
            A+ + +A  L+ S LK +  + T   I+++LL +Y    S   VFDL+VQ Y+KLRM++ 
Sbjct: 122  AKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLED 181

Query: 1036 AFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIM 1215
            AFE+C YL+ HGF  +L+SFN LLH I KS   E+ ++WKVY  M E+R Y NE T++ M
Sbjct: 182  AFEVCCYLENHGFSLTLLSFNALLHGILKSG--ENVMVWKVYEHMIEKRKYPNEITIRTM 239

Query: 1216 IEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNM 1395
            I ALCK G+LQ  VD+  +I GK C P+V+VN  LV +++ +GRIE+G+ +LKR++QKN+
Sbjct: 240  ISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNL 299

Query: 1396 MLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAIN 1575
            +LD++ YS +V+ ++++GNLE A +V+E MLKRGF  NSF++++FI+ Y E G + EA N
Sbjct: 300  ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 1576 LFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLC 1755
            + +EM++M LKPYDET++ +++GCA+ G+   ++  CEEMI++G++P+ + FNE+VR LC
Sbjct: 360  VLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLC 419

Query: 1756 EDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            E G  E AN +LTL LDKGF P+ETTYSHLI GY  + N+++V KLYY
Sbjct: 420  EIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYY 467



 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 3/300 (1%)
 Frame = +1

Query: 802  KNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            K +EH I+       IT+R  +I+  C            E ++ +V +LLD        P
Sbjct: 219  KVYEHMIEKRKYPNEITIRT-MISALC-----------KEGKLQVVVDLLDKILGKRCSP 266

Query: 982  FVF---DLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
             V     LV +   + R+ D    L R L K+    S I+++ ++H   K  + E  L W
Sbjct: 267  IVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS-IAYSFVVHTKLKLGNLE--LAW 323

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +V+  M +R    N       I A  ++G + +  +V   +      P       L+   
Sbjct: 324  EVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGC 383

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               G ++  V   + ++++ ++     ++ +V    +IG+ E+A  +   +L +GF PN 
Sbjct: 384  AKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNE 443

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  I  Y +EG +++   L+ EM+   L P    ++ +++     GK  +A  + ++
Sbjct: 444  TTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERVTKQ 503


>gb|EOY14225.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao]
          Length = 596

 Score =  441 bits (1133), Expect = e-121
 Identities = 223/468 (47%), Positives = 327/468 (69%), Gaps = 1/468 (0%)
 Frame = +1

Query: 499  LLNPKMIFLLRKRCPILFNLIQAPTKPPCLWIHQLAHVDSDRKIASSLCDFLRQGVNWNA 678
            LLN K+  LL     I  N   A  K   +  H L+ ++++  I +S+ D  ++  NW  
Sbjct: 3    LLNRKLGSLLVSTS-IHHNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGT 61

Query: 679  LSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKNFEHKIKPYSIAIHITVR 858
            L++ FSSV L  ++V+QVLL+ KQP  A+ ALNFF W+A  +NF+H+I  Y IAIHI V 
Sbjct: 62   LTKTFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSAKSQNFKHQIYSYCIAIHILVH 121

Query: 859  ARLINDACALIESVLKRNGSE-TEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDS 1035
            A+ + +A  L+ S LK +  + T   I+++LL +Y    S   VFDL+VQ Y+KLRM++ 
Sbjct: 122  AKQLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLED 181

Query: 1036 AFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYGNEATVKIM 1215
            AFE+C YL+ HGF  +L+SFN LLH I KS   E+ ++WKVY  M E+R Y NE T++ M
Sbjct: 182  AFEVCCYLENHGFSLTLLSFNALLHGILKSG--ENVMVWKVYEHMIEKRKYPNEITIRTM 239

Query: 1216 IEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNM 1395
            I ALCK G+LQ  VD+  +I GK C P+V+VN  LV +++ +GRIE+G+ +LKR++QKN+
Sbjct: 240  ISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNL 299

Query: 1396 MLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAIN 1575
            +LD++ YS +V+ ++++GNLE A +V+E MLKRGF  NSF++++FI+ Y E G + EA N
Sbjct: 300  ILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAEN 359

Query: 1576 LFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPNSNVFNELVRRLC 1755
            + +EM++M LKPYDET++ +++GCA+ G+   ++  CEEMI++G++P+ + FNE+VR LC
Sbjct: 360  VLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLC 419

Query: 1756 EDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVLKLYY 1899
            E G  E AN +LTL LDKGF P+ETTYSHLI GY  + N+++V KLYY
Sbjct: 420  EIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYY 467



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 80/358 (22%), Positives = 143/358 (39%), Gaps = 3/358 (0%)
 Frame = +1

Query: 802  KNFEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCP 981
            K +EH I+       IT+R  +I+  C            E ++ +V +LLD        P
Sbjct: 219  KVYEHMIEKRKYPNEITIRT-MISALC-----------KEGKLQVVVDLLDKILGKRCSP 266

Query: 982  FVF---DLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIW 1152
             V     LV +   + R+ D    L R L K+    S I+++ ++H   K  + E  L W
Sbjct: 267  IVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS-IAYSFVVHTKLKLGNLE--LAW 323

Query: 1153 KVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRM 1332
            +V+  M +R    N       I A  ++G + +  +V   +      P       L+   
Sbjct: 324  EVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGC 383

Query: 1333 LGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNS 1512
               G ++  V   + ++++ ++     ++ +V    +IG+ E+A  +   +L +GF PN 
Sbjct: 384  AKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNE 443

Query: 1513 FVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEE 1692
              Y+  I  Y +EG +++   L+ EM+                                 
Sbjct: 444  TTYSHLIAGYGKEGNIQQVFKLYYEME--------------------------------- 470

Query: 1693 MIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDK 1866
               K + P   VF  L+R LC  G +E+A + L +  D+     E  Y  LI G+ +K
Sbjct: 471  --YKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEK 526



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 3/281 (1%)
 Frame = +1

Query: 886  LIESVLKRNGSETEIFIVDNLLDTYKDADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDK 1065
            L+  V++    E  + ++  +L      DS  + F  VV    KL  ++ A+E+   + K
Sbjct: 274  LVFKVIEEGRIEDGMELLKRMLQKNLILDSIAYSF--VVHTKLKLGNLELAWEVHEEMLK 331

Query: 1066 HGFCPSLISFNKLLHVIQKSESCESGLIWKVYGFMTERRVYG---NEATVKIMIEALCKA 1236
             GF  +   F+  +         ESG I +    + E    G    + T   +IE   KA
Sbjct: 332  RGFIANSFLFSSFIRAYS-----ESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKA 386

Query: 1237 GELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGRIEEGVLVLKRLMQKNMMLDTVCY 1416
            GE++  V     +  +   P       +V  +   G  E    +L  ++ K  + +   Y
Sbjct: 387  GEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTY 446

Query: 1417 SLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTAFIQTYCEEGMVEEAINLFQEMKS 1596
            S ++    + GN++   ++Y  M  +  SP   V+T+ I+  C  G +EEA    + MK 
Sbjct: 447  SHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERYLRIMKD 506

Query: 1597 MDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKGMLPN 1719
              +   ++ Y  ++ G   +G  + A  I  EM+ +GM P+
Sbjct: 507  RSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARGMKPH 547


>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Solanum lycopersicum]
          Length = 552

 Score =  425 bits (1092), Expect = e-116
 Identities = 209/431 (48%), Positives = 306/431 (70%), Gaps = 2/431 (0%)
 Frame = +1

Query: 613  DSDRKIASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWA 792
            +S+  I +S+C+ LR+G NW  L++ F S +  D IV++VLL+ K+P +AK AL+FF W+
Sbjct: 44   NSNNSIITSMCNSLRRGENWQVLTKKFQSFHFTDPIVQEVLLQLKEPHDAKNALSFFHWS 103

Query: 793  AHCKNFEHKIKPYSIAIHITVRARLINDACALIESVL-KRNGSETEIF-IVDNLLDTYKD 966
            A   N  H +  Y I IHI  +++L+  A ALIESVL K +G +  +F ++  L+ +YK 
Sbjct: 104  AKSFNSRHGVFIYCIIIHILAKSKLVRHANALIESVLRKESGVDGHVFSVLACLIGSYKL 163

Query: 967  ADSCPFVFDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGL 1146
            ADSC FVFDL VQC +KLRMID   ++C+ LD +GF  SLIS+N LLHV+QKSE  ++ +
Sbjct: 164  ADSCSFVFDLFVQCCAKLRMIDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSE--KTSM 221

Query: 1147 IWKVYGFMTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVL 1326
            +W +Y +M E+R+Y NE T +IMI ALCK G LQ+F+DV  + HGK C P VVVN  L+ 
Sbjct: 222  VWGIYEYMIEKRIYPNEMTTRIMISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIY 281

Query: 1327 RMLGDGRIEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSP 1506
             M+ +GRIE+G+ +++R++QKNM+LDT+  SLIV A++++ +LESA  VY+ ML+RGF  
Sbjct: 282  GMIEEGRIEDGLRLMRRMLQKNMILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEG 341

Query: 1507 NSFVYTAFIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSIC 1686
            N+ VY +FI  YCEE  ++EAI L  EM+ +++KP+ ET++ ++K C+  G+  ++L IC
Sbjct: 342  NALVYDSFIGAYCEEKRIDEAIKLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKIC 401

Query: 1687 EEMIQKGMLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDK 1866
            ++MI  G+LP+   FN LV +L E+G  + ANK+LT  +DKGF PD++ YS+LI GY + 
Sbjct: 402  DKMIGNGLLPSCLSFNALVAKLSENGSAKCANKLLTTLMDKGFIPDQSIYSYLIVGYANV 461

Query: 1867 RNVEEVLKLYY 1899
             +VE  LKLYY
Sbjct: 462  GDVEGALKLYY 472


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332864|gb|EFH63282.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 539

 Score =  415 bits (1067), Expect = e-113
 Identities = 199/424 (46%), Positives = 295/424 (69%)
 Frame = +1

Query: 628  IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKN 807
            +  S+   L+   NW  LS  FSS+ L+D+++E +LL F  P  AKRAL FF W+AH +N
Sbjct: 45   LIDSISKSLQSNDNWETLSTKFSSIDLSDSLIETILLRFNSPETAKRALTFFHWSAHTRN 104

Query: 808  FEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFV 987
              H I+ Y++ IHI V+ARL+ DA ALIES L  + S+    +VD+LLDTY ++ S P V
Sbjct: 105  LRHGIRSYAVTIHILVKARLLIDARALIESSLLNSSSD----LVDSLLDTYVNSSSTPLV 160

Query: 988  FDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGF 1167
            FDL+VQCY+K+R ++  FE+ + L   GF  S+I+ N L+H   KS   +  L+W++Y F
Sbjct: 161  FDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVD--LVWRIYEF 218

Query: 1168 MTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGR 1347
              ++R+Y NE T++IMI  LCK G L++ VD+  RI+GK C P V+VN SLV R+L + R
Sbjct: 219  AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKR 278

Query: 1348 IEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTA 1527
            +EE + +LKRL+ KNM++D + YS++VYA+ + G+LE A+ V++ M++RGFS N+FVYTA
Sbjct: 279  VEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTA 338

Query: 1528 FIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKG 1707
            F++  CE G VEEA  L  EM+   + PY+ET++ ++ GCAR G+    L  CE M+ +G
Sbjct: 339  FVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARG 398

Query: 1708 MLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVL 1887
            ++P+ + FN +V+RL E  +V +AN+ILT S+DKGF PDE TYSHLI+G+ +  ++++ L
Sbjct: 399  LMPSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQAL 458

Query: 1888 KLYY 1899
            KL+Y
Sbjct: 459  KLFY 462


>ref|XP_006391386.1| hypothetical protein EUTSA_v10018418mg [Eutrema salsugineum]
            gi|557087820|gb|ESQ28672.1| hypothetical protein
            EUTSA_v10018418mg [Eutrema salsugineum]
          Length = 511

 Score =  415 bits (1066), Expect = e-113
 Identities = 204/424 (48%), Positives = 304/424 (71%)
 Frame = +1

Query: 628  IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKN 807
            +  ++ + LR   NW+ LS  +SS+  +D++V+++LL FKQP  AKRAL+FF W+A+ +N
Sbjct: 42   LIDAILESLRNSENWDTLSNKYSSIDFSDSLVKKILLRFKQPETAKRALSFFHWSANTRN 101

Query: 808  FEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFV 987
              H    Y++AIHI VRARL+ DA ALIES L  + S++++  +D+LL TY  + S P V
Sbjct: 102  LRHGTSSYAVAIHILVRARLLVDARALIESSLLNSDSDSDL--LDSLLSTYDVSCSTPLV 159

Query: 988  FDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGF 1167
            FDL+VQ Y+KLR+++S F++   L   GF  S+I+ N LLH   KS   +  L+W++Y  
Sbjct: 160  FDLLVQGYAKLRLLESGFDVFHRLCDRGFSLSVITLNTLLHFAAKSSRID--LVWRIYEL 217

Query: 1168 MTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGR 1347
             T++R+Y NE T++IMI ALCK G+L++ V +  RIHGK   P ++VN SLV R+L   R
Sbjct: 218  ATDKRIYPNETTIQIMISALCKEGKLKEVVALLDRIHGKRSSPPLIVNTSLVFRVLESNR 277

Query: 1348 IEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTA 1527
            IEEG+ +LKRL+QKNM++DT+ YSL+V AR + G+LESA++V++ ML+RGF  N+FVYTA
Sbjct: 278  IEEGMSLLKRLLQKNMVIDTIGYSLVVLARTKQGDLESARKVFDEMLQRGFDANAFVYTA 337

Query: 1528 FIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKG 1707
            FI+ Y E+G +EEA  L  EM++  + PY+ET+  V+ GCAR G+  ++L  CE M+ +G
Sbjct: 338  FIKAYTEKGDIEEAERLIAEMENSGIDPYEETFDSVIVGCARCGREEESLKYCEMMVTRG 397

Query: 1708 MLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVL 1887
            +LP+ + FNE+V+RL +  +V +AN+ILT S+DKGF+PDE TY+HLI+G+   + ++  L
Sbjct: 398  LLPSCSAFNEMVKRLSKIENVRRANEILTKSVDKGFTPDEQTYTHLIQGFAKGKCIDIAL 457

Query: 1888 KLYY 1899
            KL+Y
Sbjct: 458  KLFY 461


>ref|XP_006302104.1| hypothetical protein CARUB_v10020095mg [Capsella rubella]
            gi|482570814|gb|EOA35002.1| hypothetical protein
            CARUB_v10020095mg [Capsella rubella]
          Length = 548

 Score =  412 bits (1058), Expect = e-112
 Identities = 205/424 (48%), Positives = 295/424 (69%)
 Frame = +1

Query: 628  IASSLCDFLRQGVNWNALSRHFSSVYLNDAIVEQVLLEFKQPAEAKRALNFFRWAAHCKN 807
            + +++   L+   NW  LS  FSS+ L+D+IV Q+LL FKQP  AKRAL FF W+AH +N
Sbjct: 48   LINAISKSLQSNDNWETLSTKFSSIDLSDSIVNQILLRFKQPESAKRALTFFHWSAHTRN 107

Query: 808  FEHKIKPYSIAIHITVRARLINDACALIESVLKRNGSETEIFIVDNLLDTYKDADSCPFV 987
              H    Y++AIHI V+ARL+ DA ALIES L    S     +VD+LLDTY+ + S P V
Sbjct: 108  LRHGTTSYAVAIHILVKARLLIDARALIESSLLNPDSG----LVDSLLDTYEVSSSTPLV 163

Query: 988  FDLVVQCYSKLRMIDSAFELCRYLDKHGFCPSLISFNKLLHVIQKSESCESGLIWKVYGF 1167
            FDLVVQCY+K+R ++  FE+ + L   GF  S+++ N L+H   KS   +  L+W++Y  
Sbjct: 164  FDLVVQCYAKIRDLELGFEVFKRLCCCGFILSVVTLNTLIHYSAKSNRVD--LVWRIYEC 221

Query: 1168 MTERRVYGNEATVKIMIEALCKAGELQKFVDVTSRIHGKNCPPMVVVNASLVLRMLGDGR 1347
              ++RVY NE T++IMI  LCK G L++ VD+  RIHGK C P V+VN SLV R+L D R
Sbjct: 222  GIDKRVYPNETTIRIMIRVLCKEGRLKEVVDLLDRIHGKRCLPPVIVNTSLVFRVLEDNR 281

Query: 1348 IEEGVLVLKRLMQKNMMLDTVCYSLIVYARIQIGNLESAQQVYEGMLKRGFSPNSFVYTA 1527
            IEE + +LK+L+ KNM++DT+ YS++VYA+ + G+LESA+ V++ ML+RGFS N+FVYTA
Sbjct: 282  IEESMSLLKKLLMKNMVVDTIGYSIVVYAKTKEGDLESARNVFDEMLQRGFSGNAFVYTA 341

Query: 1528 FIQTYCEEGMVEEAINLFQEMKSMDLKPYDETYSIVVKGCARRGKASDALSICEEMIQKG 1707
            F++  CE G VEEA     EM+   + PY++T++ +++GCAR GK    L  CE M+ +G
Sbjct: 342  FVRACCERGEVEEAERWMSEMEESGINPYEDTFNCLIEGCARFGKEEKCLEYCEVMVARG 401

Query: 1708 MLPNSNVFNELVRRLCEDGHVEQANKILTLSLDKGFSPDETTYSHLIKGYRDKRNVEEVL 1887
            ++P+ + FNE+V+RL +  +V+ AN+ILT S+  GF PDE TYSH+I+G+ +  +VE+ L
Sbjct: 402  LMPSCSAFNEMVKRLSKIENVKHANEILTKSIGNGFIPDEHTYSHMIQGFINGDDVEQGL 461

Query: 1888 KLYY 1899
            KL+Y
Sbjct: 462  KLFY 465