BLASTX nr result
ID: Rheum21_contig00015665
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00015665
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155034.1| PREDICTED: general transcription factor IIE ... 70 2e-10
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ... 70 2e-10
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|5... 70 2e-10
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ... 70 3e-10
emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera] 70 3e-10
ref|XP_006341650.1| PREDICTED: general transcription factor IIE ... 69 6e-10
ref|XP_006341649.1| PREDICTED: general transcription factor IIE ... 69 6e-10
emb|CBI27327.3| unnamed protein product [Vitis vinifera] 69 6e-10
gb|EOX93216.1| General transcription factor IIE subunit 1 isofor... 69 8e-10
gb|EOX93215.1| General transcription factor IIE subunit 1 isofor... 69 8e-10
gb|EOX93214.1| General transcription factor IIE subunit 1 isofor... 69 8e-10
ref|XP_006485745.1| PREDICTED: general transcription factor IIE ... 67 3e-09
ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citr... 67 3e-09
ref|XP_004508577.1| PREDICTED: general transcription factor IIE ... 66 5e-09
ref|XP_004235735.1| PREDICTED: general transcription factor IIE ... 66 5e-09
ref|XP_003524511.1| PREDICTED: general transcription factor IIE ... 66 5e-09
ref|XP_004299240.1| PREDICTED: general transcription factor IIE ... 65 9e-09
ref|NP_001169634.1| hypothetical protein [Zea mays] gi|224030565... 63 5e-08
ref|NP_001141491.1| uncharacterized protein LOC100273603 [Zea ma... 63 5e-08
ref|XP_003573797.1| PREDICTED: general transcription factor IIE ... 62 6e-08
>ref|XP_004155034.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
sativus]
Length = 403
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGI 39
>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
sativus]
Length = 475
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGI 39
>ref|XP_002331723.1| predicted protein [Populus trichocarpa]
gi|566205569|ref|XP_006374149.1| transcription
initiation factor IIE alpha subunit family protein
[Populus trichocarpa] gi|550321822|gb|ERP51946.1|
transcription initiation factor IIE alpha subunit family
protein [Populus trichocarpa]
Length = 472
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGI 39
>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
product [Vitis vinifera]
Length = 475
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/39 (87%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+S+EPFN+LVKLAARAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGI 39
>emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]
Length = 729
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/39 (87%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+S+EPFN+LVKLAARAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGI 39
>ref|XP_006341650.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X2 [Solanum tuberosum]
Length = 472
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/39 (87%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDDITTKGDN PK+ RSDNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGI 39
>ref|XP_006341649.1| PREDICTED: general transcription factor IIE subunit 1-like isoform
X1 [Solanum tuberosum]
Length = 474
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/39 (87%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDDITTKGDN PK+ RSDNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGI 39
>emb|CBI27327.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/39 (87%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLA RAFYDDITTKGDN PKT RSDNRGI
Sbjct: 1 MSIEPFNRLVKLATRAFYDDITTKGDNQPKTGRSDNRGI 39
>gb|EOX93216.1| General transcription factor IIE subunit 1 isoform 3 [Theobroma
cacao]
Length = 473
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDD+TTKGDN PKT R DNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGI 39
>gb|EOX93215.1| General transcription factor IIE subunit 1 isoform 2 [Theobroma
cacao]
Length = 480
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDD+TTKGDN PKT R DNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGI 39
>gb|EOX93214.1| General transcription factor IIE subunit 1 isoform 1 [Theobroma
cacao]
Length = 475
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKLAARAFYDD+TTKGDN PKT R DNRGI
Sbjct: 1 MSIEPFNRLVKLAARAFYDDVTTKGDNQPKTGRGDNRGI 39
>ref|XP_006485745.1| PREDICTED: general transcription factor IIE subunit 1-like [Citrus
sinensis]
Length = 474
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = -1
Query: 111 SIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
SIEPFN+LVKL ARAFYDDITTKGDN PK+ RSDNRGI
Sbjct: 3 SIEPFNRLVKLVARAFYDDITTKGDNQPKSGRSDNRGI 40
>ref|XP_006440911.1| hypothetical protein CICLE_v10019993mg [Citrus clementina]
gi|557543173|gb|ESR54151.1| hypothetical protein
CICLE_v10019993mg [Citrus clementina]
Length = 474
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = -1
Query: 111 SIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
SIEPFN+LVKL ARAFYDDITTKGDN PK+ RSDNRGI
Sbjct: 3 SIEPFNRLVKLVARAFYDDITTKGDNQPKSGRSDNRGI 40
>ref|XP_004508577.1| PREDICTED: general transcription factor IIE subunit 1-like [Cicer
arietinum]
Length = 474
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/37 (86%), Positives = 35/37 (94%), Gaps = 1/37 (2%)
Frame = -1
Query: 108 IEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
IEP+NKLVKLAARAFYDD+T+KGDN PKT RSDNRGI
Sbjct: 2 IEPYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGI 38
>ref|XP_004235735.1| PREDICTED: general transcription factor IIE subunit 1-like [Solanum
lycopersicum]
Length = 472
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIE FN+LVKLAARAFYDDITTKGDN PK+ RSDNRGI
Sbjct: 1 MSIESFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGI 39
>ref|XP_003524511.1| PREDICTED: general transcription factor IIE subunit 1-like [Glycine
max]
Length = 471
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/37 (86%), Positives = 35/37 (94%), Gaps = 1/37 (2%)
Frame = -1
Query: 108 IEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
IEP+NKLVKLAARAFYDD+T+KGDN PKT RSDNRGI
Sbjct: 2 IEPYNKLVKLAARAFYDDLTSKGDNQPKTGRSDNRGI 38
>ref|XP_004299240.1| PREDICTED: general transcription factor IIE subunit 1-like
[Fragaria vesca subsp. vesca]
Length = 451
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/39 (79%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
Frame = -1
Query: 114 LSIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
+SIEPFN+LVKL ARAFYDD+ TKGDN PKT RSDNRG+
Sbjct: 1 MSIEPFNRLVKLTARAFYDDLPTKGDNQPKTGRSDNRGL 39
>ref|NP_001169634.1| hypothetical protein [Zea mays] gi|224030565|gb|ACN34358.1| unknown
[Zea mays] gi|413934288|gb|AFW68839.1| hypothetical
protein ZEAMMB73_761589 [Zea mays]
Length = 143
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = -1
Query: 111 SIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
SIEPFN+LVKLAARAFYDD++ KGDN PKT R DNRG+
Sbjct: 3 SIEPFNRLVKLAARAFYDDVSMKGDNQPKTSRGDNRGM 40
>ref|NP_001141491.1| uncharacterized protein LOC100273603 [Zea mays]
gi|194704782|gb|ACF86475.1| unknown [Zea mays]
gi|195625466|gb|ACG34563.1| RNA polymerase II
transcription factor/ transcription initiation factor
[Zea mays] gi|223947847|gb|ACN28007.1| unknown [Zea
mays] gi|413934289|gb|AFW68840.1| RNA polymerase II
transcription factor/ transcription initiation factor
[Zea mays]
Length = 460
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = -1
Query: 111 SIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
SIEPFN+LVKLAARAFYDD++ KGDN PKT R DNRG+
Sbjct: 3 SIEPFNRLVKLAARAFYDDVSMKGDNQPKTSRGDNRGM 40
>ref|XP_003573797.1| PREDICTED: general transcription factor IIE subunit 1-like
[Brachypodium distachyon]
Length = 465
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Frame = -1
Query: 111 SIEPFNKLVKLAARAFYDDITTKGDNLPKT-RSDNRGI 1
S+EPFN+LVKLAARAFYDDI+ KGDN PKT R DNRG+
Sbjct: 3 SLEPFNRLVKLAARAFYDDISMKGDNQPKTSRGDNRGM 40