BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00014748
         (1666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II tra...   492   e-136
ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citr...   489   e-135
ref|XP_002532550.1| conserved hypothetical protein [Ricinus comm...   488   e-135
ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II tra...   483   e-133
ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258...   482   e-133
gb|EMJ03370.1| hypothetical protein PRUPE_ppa006482mg [Prunus pe...   480   e-133
gb|EOY08470.1| Serine/threonine-protein kinase irlC isoform 1 [T...   473   e-130
ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Popu...   470   e-130
ref|XP_006603882.1| PREDICTED: mediator of RNA polymerase II tra...   460   e-127
ref|XP_006603884.1| PREDICTED: mediator of RNA polymerase II tra...   459   e-126
ref|XP_003554665.1| PREDICTED: mediator of RNA polymerase II tra...   459   e-126
ref|XP_006407708.1| hypothetical protein EUTSA_v10020833mg [Eutr...   456   e-125
ref|XP_004515424.1| PREDICTED: mediator of RNA polymerase II tra...   455   e-125
ref|XP_006345446.1| PREDICTED: mediator of RNA polymerase II tra...   453   e-124
ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II tra...   452   e-124
ref|NP_566345.1| uncharacterized protein [Arabidopsis thaliana] ...   452   e-124
ref|XP_002882608.1| hypothetical protein ARALYDRAFT_897068 [Arab...   451   e-124
ref|XP_006577096.1| PREDICTED: mediator of RNA polymerase II tra...   451   e-124
gb|AAM61426.1| unknown [Arabidopsis thaliana]                         450   e-123
gb|ESW34962.1| hypothetical protein PHAVU_001G195400g [Phaseolus...   449   e-123

>ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Citrus sinensis]
          Length = 441

 Score =  492 bits (1267), Expect = e-136
 Identities = 252/425 (59%), Positives = 309/425 (72%), Gaps = 14/425 (3%)
 Frame = -3

Query: 1619 ERERVRMLQQQPLTRTGAGTTTDPCG--EAPPKQVAMAMERLGQASRLIADIRIGADRLL 1446
            ++++ +  + Q L    A     P    EAPPKQVA+A+ERL QA RLIAD+R+GADRLL
Sbjct: 16   QQQQQQQQESQALANPNASPDQPPQSTTEAPPKQVALALERLAQAGRLIADVRLGADRLL 75

Query: 1445 EALYASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLH 1266
            EAL+ +++ H   KP    + E+ AMR H QDLR+IGRQLEE+GVL++ LRSRSNSWGLH
Sbjct: 76   EALFVAAQPHQSNKPLHLFIKEDAAMRQHLQDLRSIGRQLEETGVLNEPLRSRSNSWGLH 135

Query: 1265 MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-------AEP 1107
            MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQK+RFFPHLD        EP
Sbjct: 136  MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVHDQSTEP 195

Query: 1106 SLKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSA 927
              K+HC   A    NQEE SDC  L D++  LEKE P++KI T+ RL W KRAS LPSSA
Sbjct: 196  ESKKHCVPQALPASNQEELSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSA 255

Query: 926  IDDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDA 747
             +  +E    H++ S++ LRPG L  T   DKV+VIEL  PSI RAIVSLHPVG+  PDA
Sbjct: 256  NESPLELLKEHNFHSSSKLRPG-LQNTVAADKVSVIELLFPSIFRAIVSLHPVGTIEPDA 314

Query: 746  VAFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTL 567
            VAFFSPDEGG+Y+H RG SVYHVF+HITE+A  ALQ F G+  + +L   L W+ SYQTL
Sbjct: 315  VAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTL 374

Query: 566  FSKPCSKCGRLLSMDRQLSIFLPPVHRSYRQF-----SSSRISTKPNDQQLDLIQAYHTG 402
            FSK CSKCGRLL+MD++L++ LPPV R YR F     SS+++ +  N+Q  D++ AYH G
Sbjct: 375  FSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIG 434

Query: 401  CSPQD 387
            C  +D
Sbjct: 435  CFSED 439


>ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citrus clementina]
            gi|557532125|gb|ESR43308.1| hypothetical protein
            CICLE_v10011749mg [Citrus clementina]
          Length = 438

 Score =  489 bits (1260), Expect = e-135
 Identities = 252/417 (60%), Positives = 302/417 (72%), Gaps = 14/417 (3%)
 Frame = -3

Query: 1595 QQQPLTRTGAGTTTDP--CGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSE 1422
            + Q L    A     P    EAPPKQVA+A+ERL QA RLIAD+R+GADRLLEAL+ +++
Sbjct: 21   ESQALANPNASPDQPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFVAAQ 80

Query: 1421 SHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDG 1242
             H   KP    + E+ AMR H QDLR IGRQLE +GVL++ LRSRSNSWGLHMPLVCPDG
Sbjct: 81   PHQSNKPLHLFIKEDAAMRQHLQDLRTIGRQLEGTGVLNEPLRSRSNSWGLHMPLVCPDG 140

Query: 1241 AVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-------AEPSLKRHCGM 1083
            AVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQK+RFFPHLD        EP  K+HC  
Sbjct: 141  AVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVP 200

Query: 1082 LAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEAS 903
             A    NQEE SDC  L D++  LEKE P++KI T+ RL W KRAS LPSSA +  +E  
Sbjct: 201  QALPASNQEELSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELL 260

Query: 902  IGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDE 723
              H++ S++ LRPG L  T   DKVAVIEL  PSI RAIVSLHPVGS  PDAVAFFSPDE
Sbjct: 261  KEHNFHSSSKLRPG-LQNTVAADKVAVIELLFPSIFRAIVSLHPVGSIEPDAVAFFSPDE 319

Query: 722  GGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKC 543
            GG+Y+H RG SVYHVF+HITE+A  ALQ F G+  + +L   L W+ SYQTLFSK CSKC
Sbjct: 320  GGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 379

Query: 542  GRLLSMDRQLSIFLPPVHRSYRQF-----SSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            G+LL+MD++L++ LPPV R YR F     SS+++ +  N+Q  D++ AYH GC  +D
Sbjct: 380  GQLLAMDKRLALLLPPVSRPYRHFFPTVTSSAQLISSTNEQSSDVVSAYHIGCFSED 436


>ref|XP_002532550.1| conserved hypothetical protein [Ricinus communis]
            gi|223527739|gb|EEF29844.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 434

 Score =  488 bits (1255), Expect = e-135
 Identities = 251/405 (61%), Positives = 300/405 (74%), Gaps = 15/405 (3%)
 Frame = -3

Query: 1556 TDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESHHPTKPFDSILNEE 1377
            T P  +APPKQVAMAM+RL QA+RLIAD+R+GADRLLEAL+ S++ H   KP    + E+
Sbjct: 29   TPPADDAPPKQVAMAMDRLSQAARLIADVRLGADRLLEALFMSAQPHQSKKPLLLFIKED 88

Query: 1376 IAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQA 1197
             AMR H QDLR++GRQLEESGVL+D+LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQA
Sbjct: 89   AAMRQHLQDLRSVGRQLEESGVLNDSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQA 148

Query: 1196 GASAVDRTRLALKSFTDQKRRFFPHLD-------AEPSLKRHCGM--LAPGVDNQEEPSD 1044
            GASAVDRTRLALK+FTDQKRRFFPHLD        E   K+ C +  + P     EE SD
Sbjct: 149  GASAVDRTRLALKAFTDQKRRFFPHLDDGVDGQNTESVSKKQCSLQVVPPVTLLVEELSD 208

Query: 1043 CGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSYRSANSLRP 864
            C  L D+++ LEKE P++KISTF RL W KRAS LP+   ++ +E S  H++ + N LR 
Sbjct: 209  CKTLSDVLTRLEKEIPNVKISTFERLDWLKRASSLPAPVSENPIETSKEHTFHTLNKLRT 268

Query: 863  GALSG-TTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYLHPRGLSV 687
            G+ S  + P DKVAVIEL  PS+ RA+VSLHP GS  PDAVAFFSPDEGGSY+H R  SV
Sbjct: 269  GSQSAVSVPTDKVAVIELLSPSVFRALVSLHPAGSIDPDAVAFFSPDEGGSYIHARSFSV 328

Query: 686  YHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLSMDRQLSI 507
            +HVF+ ITE+A MALQHF G+  +  L + L W+ SYQTLFSK CSKCGRLL+MDR+ S+
Sbjct: 329  HHVFRQITEHAAMALQHFLGIKAEIALFTLLHWICSYQTLFSKVCSKCGRLLAMDRKSSL 388

Query: 506  FLPPVHRSYRQFS-----SSRISTKPNDQQLDLIQAYHTGCSPQD 387
             LPPVHR YR FS     S++  +   DQ LD   AYHTGC  +D
Sbjct: 389  LLPPVHRPYRHFSPLESPSTQPISSTKDQGLDFPGAYHTGCFSED 433


>ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Fragaria vesca subsp. vesca]
          Length = 408

 Score =  483 bits (1243), Expect = e-133
 Identities = 255/418 (61%), Positives = 307/418 (73%), Gaps = 14/418 (3%)
 Frame = -3

Query: 1598 LQQQPLTRTGAGTTTDP-------CGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEA 1440
            +QQQP  +T   TTT P         EAPPKQVA+AM+RLGQA RLIADIR+GADRLLEA
Sbjct: 1    MQQQPPPQT---TTTPPPPSVGSTSAEAPPKQVALAMDRLGQAGRLIADIRLGADRLLEA 57

Query: 1439 LYASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMP 1260
            ++ +++ H  TKP    LNE+ +MR H QDLR+IGRQLEESGVL+DALRSRSNSWGLHMP
Sbjct: 58   MFVAAQPHQSTKPLHLFLNEDASMRQHLQDLRSIGRQLEESGVLNDALRSRSNSWGLHMP 117

Query: 1259 LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-------AEPSL 1101
            LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+F+DQKRRFFPHLD        EP  
Sbjct: 118  LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFSDQKRRFFPHLDDGLDGQSDEPLS 177

Query: 1100 KRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAID 921
            K+ C   +    NQEE  DC  L +I+  LEK+ P++KI T+ RL W KRAS LP++  +
Sbjct: 178  KKPCVSPSSSTHNQEELLDCKTLSEILMSLEKKVPNLKIFTYERLDWLKRASSLPAN--E 235

Query: 920  DSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVA 741
              +E    H++ S++ LR  +L      DKVAVIEL  PS+ RA+VSLHP GS  PDAVA
Sbjct: 236  SPLETVKDHNFHSSSKLRSTSLVDVA-TDKVAVIELLFPSVFRAVVSLHPAGSIDPDAVA 294

Query: 740  FFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFS 561
            FFSP+EGGSY+H RG SVYHVFKHITE+A +ALQ+F GV  +  L S L W+ SYQTLF+
Sbjct: 295  FFSPEEGGSYIHARGFSVYHVFKHITEHAGLALQYFLGVQAETALYSLLLWICSYQTLFT 354

Query: 560  KPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            K CSKC RLLSMDRQ ++ LPPV+R YRQFS+S IS+      L+L + YH GC  ++
Sbjct: 355  KVCSKCERLLSMDRQSALLLPPVNRPYRQFSTSNISS-----GLNLTETYHVGCFTEE 407


>ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258667 [Vitis vinifera]
            gi|296085885|emb|CBI31209.3| unnamed protein product
            [Vitis vinifera]
          Length = 419

 Score =  482 bits (1241), Expect = e-133
 Identities = 250/419 (59%), Positives = 299/419 (71%), Gaps = 14/419 (3%)
 Frame = -3

Query: 1601 MLQQQPLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSE 1422
            M QQQ        T+ +   EAPPKQVA+AM+RL QA+RLIAD+R+GADRLLEAL+ S++
Sbjct: 1    MQQQQQTQAARNPTSAESTAEAPPKQVALAMDRLAQAARLIADVRLGADRLLEALFVSAQ 60

Query: 1421 SHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDG 1242
             H  TKP    L E+ +MR H QDLR IG+QLE+SGVL+++LRSRSNSWGLHMPLVCPDG
Sbjct: 61   PHQTTKPLHLFLKEDSSMRQHLQDLRTIGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDG 120

Query: 1241 AVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD---------AEPSLKRHC 1089
            AVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD         +E   K+HC
Sbjct: 121  AVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHC 180

Query: 1088 GMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVE 909
            G     V  QEE SD   L D++  +EK+ P++KI T+ RL W KRAS LP SA +  ++
Sbjct: 181  GSQISTVTQQEELSDYRTLSDVLMHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMD 240

Query: 908  ASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSP 729
            +S  H +  +N  R G L G    DKVAVIEL  PSI RAI+SLHP GS  PDAVAFFSP
Sbjct: 241  SSKEHDFHISNKPRLGLL-GAVAADKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSP 299

Query: 728  DEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCS 549
            DEGGSY+H RG SVYHVFKH+TE+A MALQHF G + +  L S L W+ SYQTLF++PCS
Sbjct: 300  DEGGSYVHARGFSVYHVFKHVTEHAAMALQHFLGTNTETALYSLLHWIFSYQTLFTEPCS 359

Query: 548  KCGRLLSMDRQLSIFLPPVHRSYRQF-----SSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            KC RLLSMDRQ  + LPPV+  YR F     SS +  +   +Q LD   AYH GC  ++
Sbjct: 360  KCKRLLSMDRQSDLLLPPVYHPYRSFCAIKSSSPQSISSTKNQTLDASHAYHVGCFSEE 418


>gb|EMJ03370.1| hypothetical protein PRUPE_ppa006482mg [Prunus persica]
          Length = 409

 Score =  480 bits (1235), Expect = e-133
 Identities = 253/421 (60%), Positives = 306/421 (72%), Gaps = 15/421 (3%)
 Frame = -3

Query: 1601 MLQQQPLTR--------TGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLL 1446
            M QQQP           + AG TT    EAPPKQVA+AMERL  A RLIADIR+GADRLL
Sbjct: 1    MQQQQPQATIQNHTSPSSSAGPTT---AEAPPKQVALAMERLSDAGRLIADIRLGADRLL 57

Query: 1445 EALYASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLH 1266
            EAL+ +++ H  TKP    LNE+ +MR H  DLR++GRQLEESGVL+++LRSRSNSWGLH
Sbjct: 58   EALFVAAQPHQSTKPLHLFLNEDASMRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLH 117

Query: 1265 MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLDA-------EP 1107
            MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD        E 
Sbjct: 118  MPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEGSSGQSNES 177

Query: 1106 SLKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSA 927
            + K+ C    P   +QEE  +C  L ++++ LEK  P++KI T+ RL W KRAS LP + 
Sbjct: 178  ATKKQCVSPVPAAHDQEEALECKTLSEVLARLEK-VPNLKIFTYERLDWLKRASSLPEN- 235

Query: 926  IDDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDA 747
             +   E    H++ S++ LR G L    P DKVAVIEL  PS+ RA+VSLHP GST PDA
Sbjct: 236  -ESPSETLKDHNFHSSSKLRAGPLGDVAP-DKVAVIELLFPSLFRAVVSLHPAGSTDPDA 293

Query: 746  VAFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTL 567
            VAFFSPDEGGSY+H RG S+YHV+KHITE+A MALQ+F GV  +  L + L W+ SYQTL
Sbjct: 294  VAFFSPDEGGSYIHARGFSIYHVYKHITEHAAMALQYFIGVRAETALYTLLHWICSYQTL 353

Query: 566  FSKPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            F+K CSKCGRLLSMDRQ ++ LPPV+R YRQFS+S IS+      L+L +AYH GC  ++
Sbjct: 354  FTKVCSKCGRLLSMDRQSALLLPPVYRPYRQFSASNISS-----NLNLARAYHVGCYSEE 408

Query: 386  M 384
            +
Sbjct: 409  L 409


>gb|EOY08470.1| Serine/threonine-protein kinase irlC isoform 1 [Theobroma cacao]
          Length = 429

 Score =  473 bits (1216), Expect = e-130
 Identities = 243/408 (59%), Positives = 303/408 (74%), Gaps = 12/408 (2%)
 Frame = -3

Query: 1586 PLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESHHPT 1407
            P T T   +T    GEAPPKQVA+AM+RLG A+RLIADIR+GADRLLEAL+ +++ H  +
Sbjct: 22   PATSTPPSSTA---GEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALFVAAQPHQSS 78

Query: 1406 KPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAVVAY 1227
            KP      E+ +MR H QDLR IGRQLEESGVL+++LRSRSNSWGLHMPLVCPDGAVVAY
Sbjct: 79   KPLHLFRQEDDSMRQHLQDLRTIGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAY 138

Query: 1226 AWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLDAEPS-------LKRHCGMLAPGV 1068
            AWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD E +        K+H    A   
Sbjct: 139  AWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDEQNGQGTDSVSKKHRSSQALLE 198

Query: 1067 DNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSY 888
            DNQ+  SDC  L D+++ LEK+ P++K+ T+ RL W KRAS LP+SA D+++E    H++
Sbjct: 199  DNQDNLSDCKTLSDVLTSLEKDMPNLKVLTYERLDWLKRASSLPASANDNTMEVP-KHNF 257

Query: 887  RSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYL 708
             S++ LRPG  +    +DKVAVIEL  PS+ RA+VSLHP GST PD+VAFFSPDEGGSY+
Sbjct: 258  HSSSILRPGPQT-VVSMDKVAVIELLFPSVFRAVVSLHPAGSTDPDSVAFFSPDEGGSYI 316

Query: 707  HPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLS 528
            H RG SVYHV++HITE+A +ALQ+F G+  +  L S L W+ SY++LF+  CSKCGRLL+
Sbjct: 317  HARGSSVYHVYRHITEHAAVALQYFLGIRSETALHSLLHWICSYRSLFTDICSKCGRLLA 376

Query: 527  MDRQLSIFLPPVHRSYRQFSSSRIST-----KPNDQQLDLIQAYHTGC 399
            M++Q ++ LPPVHR YR FS S++S+        DQ      AYH GC
Sbjct: 377  MEKQSALLLPPVHRPYRTFSPSKVSSTQAIASTGDQSCSAPGAYHIGC 424


>ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Populus trichocarpa]
            gi|550321025|gb|EEF05150.2| hypothetical protein
            POPTR_0016s07140g [Populus trichocarpa]
          Length = 436

 Score =  470 bits (1209), Expect = e-130
 Identities = 241/429 (56%), Positives = 308/429 (71%), Gaps = 12/429 (2%)
 Frame = -3

Query: 1634 LVFLAERERVRMLQQQPLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGAD 1455
            L+   ++++  M  Q+P              +APPKQVA+AMERLGQASRLIAD+R+GAD
Sbjct: 9    LIQQQQQQQQPMQLQEPPAAASQNPNPPYSADAPPKQVALAMERLGQASRLIADVRLGAD 68

Query: 1454 RLLEALYASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSW 1275
            RLLEAL+ ++  H   KP    + E+ +MR H QDLR++GRQLEESGVL++ LRSRSNSW
Sbjct: 69   RLLEALFIAAVPHQSNKPLQLFVKEDASMRQHLQDLRSVGRQLEESGVLNETLRSRSNSW 128

Query: 1274 GLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD------- 1116
            GLH+P+VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD       
Sbjct: 129  GLHLPVVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEGQDVQS 188

Query: 1115 AEPSLKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLP 936
             EP+ K+HC      ++ QEE SDC  L D+++CLEKE  ++K+ T+ RL W KRAS LP
Sbjct: 189  TEPASKKHCIPKDLLLNYQEELSDCKTLSDVLTCLEKEMLNLKVLTYERLDWFKRASSLP 248

Query: 935  SSAIDDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTS 756
            +SA ++ ++ S  H + S + LR  + S     DK+AVIELF PS+ RAI+SLHP GS  
Sbjct: 249  ASASENPLDTSKDHGFHSLSKLRTVSQSAAA-TDKIAVIELFFPSVFRAIISLHPAGSID 307

Query: 755  PDAVAFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSY 576
            PDAVAFFSPDEGGSY+H RG SV+HVF+ I+E+A MALQHF GV     L S + W+  Y
Sbjct: 308  PDAVAFFSPDEGGSYIHARGFSVHHVFRKISEHAAMALQHFLGVSSRTALYSIVHWICCY 367

Query: 575  QTLFSKPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI-STKPN----DQQLDLIQAY 411
            QTLF+K CSKCG+LL+MDR+  + LPPV+R Y  FS+ +I ST+ N    D  L+ + A+
Sbjct: 368  QTLFTKVCSKCGKLLAMDRKSMLLLPPVYRPYLHFSTLQIASTQTNSSAKDHGLENLGAF 427

Query: 410  HTGCSPQDM 384
            H GC  +++
Sbjct: 428  HIGCFTEEL 436


>ref|XP_006603882.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like isoform X2 [Glycine max]
            gi|571553801|ref|XP_006603883.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like isoform
            X3 [Glycine max]
          Length = 460

 Score =  460 bits (1183), Expect = e-127
 Identities = 244/428 (57%), Positives = 304/428 (71%), Gaps = 15/428 (3%)
 Frame = -3

Query: 1625 LAERERVRMLQ-QQPLTRTGAGTTTDP------CGEAPPKQVAMAMERLGQASRLIADIR 1467
            ++ + +++M Q QQ  T T   T T P        EAPPKQVA AM++LGQA R+IADIR
Sbjct: 37   ISSQPKMQMQQTQQQATATPFSTCTPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIR 96

Query: 1466 IGADRLLEALY-ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRS 1290
            IGADRLLEAL+ A+++ H   KP    L E+  MR + QDLR++G++LEESGVLS+++RS
Sbjct: 97   IGADRLLEALFVAAAQPHQGNKPLQVFLKEDACMRQYLQDLRSLGKELEESGVLSESVRS 156

Query: 1289 RSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-- 1116
            R + WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD  
Sbjct: 157  RKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDG 216

Query: 1115 ---AEPSLKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRAS 945
               +E + K+ CG     VD +E  S    L D++  LEK+ P++KI TF RL W KRAS
Sbjct: 217  LETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKILTFERLDWLKRAS 276

Query: 944  LLPSSAIDDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVG 765
             L SS  ++S+E    H+Y  +N LR G++ GT P +KVAVIEL  P + RA++SLHP G
Sbjct: 277  TLTSSTNENSLE----HNYHGSNKLRLGSV-GTVPAEKVAVIELLFPCVFRAVISLHPAG 331

Query: 764  STSPDAVAFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWL 585
            S  PDAVAFF+PDE GSY+H RG SV+HVF+HITEYA  ALQ+F G   +  L   L W+
Sbjct: 332  SMDPDAVAFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETCLYFLLHWI 391

Query: 584  GSYQTLFSKPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI--STKPNDQQLDLIQAY 411
             SYQTLFS+PCSKC RLL+MD+Q ++ LPPVHR Y QFS S+I  +    DQ  D  QAY
Sbjct: 392  CSYQTLFSRPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQNSDTTQAY 451

Query: 410  HTGCSPQD 387
            H  C  ++
Sbjct: 452  HIDCLSEE 459


>ref|XP_006603884.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like isoform X4 [Glycine max]
          Length = 450

 Score =  459 bits (1180), Expect = e-126
 Identities = 242/416 (58%), Positives = 296/416 (71%), Gaps = 14/416 (3%)
 Frame = -3

Query: 1592 QQPLTRTGAGTTTDP------CGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALY- 1434
            QQ  T T   T T P        EAPPKQVA AM++LGQA R+IADIRIGADRLLEAL+ 
Sbjct: 39   QQQATATPFSTCTPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIRIGADRLLEALFV 98

Query: 1433 ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLV 1254
            A+++ H   KP    L E+  MR + QDLR++G++LEESGVLS+++RSR + WGLHMPLV
Sbjct: 99   AAAQPHQGNKPLQVFLKEDACMRQYLQDLRSLGKELEESGVLSESVRSRKDFWGLHMPLV 158

Query: 1253 CPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-----AEPSLKRHC 1089
            CPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD     +E + K+ C
Sbjct: 159  CPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETSESASKKCC 218

Query: 1088 GMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVE 909
            G     VD +E  S    L D++  LEK+ P++KI TF RL W KRAS L SS  ++S+E
Sbjct: 219  GSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKILTFERLDWLKRASTLTSSTNENSLE 278

Query: 908  ASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSP 729
                H+Y  +N LR G++ GT P +KVAVIEL  P + RA++SLHP GS  PDAVAFF+P
Sbjct: 279  ----HNYHGSNKLRLGSV-GTVPAEKVAVIELLFPCVFRAVISLHPAGSMDPDAVAFFAP 333

Query: 728  DEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCS 549
            DE GSY+H RG SV+HVF+HITEYA  ALQ+F G   +  L   L W+ SYQTLFS+PCS
Sbjct: 334  DESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETCLYFLLHWICSYQTLFSRPCS 393

Query: 548  KCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI--STKPNDQQLDLIQAYHTGCSPQD 387
            KC RLL+MD+Q ++ LPPVHR Y QFS S+I  +    DQ  D  QAYH  C  ++
Sbjct: 394  KCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQNSDTTQAYHIDCLSEE 449


>ref|XP_003554665.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like isoform X1 [Glycine max]
            gi|571553811|ref|XP_006603885.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like isoform
            X5 [Glycine max] gi|571553815|ref|XP_006603886.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 27-like isoform X6 [Glycine max]
            gi|571553819|ref|XP_006603887.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like isoform
            X7 [Glycine max]
          Length = 418

 Score =  459 bits (1180), Expect = e-126
 Identities = 242/416 (58%), Positives = 296/416 (71%), Gaps = 14/416 (3%)
 Frame = -3

Query: 1592 QQPLTRTGAGTTTDP------CGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALY- 1434
            QQ  T T   T T P        EAPPKQVA AM++LGQA R+IADIRIGADRLLEAL+ 
Sbjct: 7    QQQATATPFSTCTPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIRIGADRLLEALFV 66

Query: 1433 ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLV 1254
            A+++ H   KP    L E+  MR + QDLR++G++LEESGVLS+++RSR + WGLHMPLV
Sbjct: 67   AAAQPHQGNKPLQVFLKEDACMRQYLQDLRSLGKELEESGVLSESVRSRKDFWGLHMPLV 126

Query: 1253 CPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-----AEPSLKRHC 1089
            CPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD     +E + K+ C
Sbjct: 127  CPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETSESASKKCC 186

Query: 1088 GMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVE 909
            G     VD +E  S    L D++  LEK+ P++KI TF RL W KRAS L SS  ++S+E
Sbjct: 187  GSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKILTFERLDWLKRASTLTSSTNENSLE 246

Query: 908  ASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSP 729
                H+Y  +N LR G++ GT P +KVAVIEL  P + RA++SLHP GS  PDAVAFF+P
Sbjct: 247  ----HNYHGSNKLRLGSV-GTVPAEKVAVIELLFPCVFRAVISLHPAGSMDPDAVAFFAP 301

Query: 728  DEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCS 549
            DE GSY+H RG SV+HVF+HITEYA  ALQ+F G   +  L   L W+ SYQTLFS+PCS
Sbjct: 302  DESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETCLYFLLHWICSYQTLFSRPCS 361

Query: 548  KCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI--STKPNDQQLDLIQAYHTGCSPQD 387
            KC RLL+MD+Q ++ LPPVHR Y QFS S+I  +    DQ  D  QAYH  C  ++
Sbjct: 362  KCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQNSDTTQAYHIDCLSEE 417


>ref|XP_006407708.1| hypothetical protein EUTSA_v10020833mg [Eutrema salsugineum]
            gi|312282481|dbj|BAJ34106.1| unnamed protein product
            [Thellungiella halophila] gi|557108854|gb|ESQ49161.1|
            hypothetical protein EUTSA_v10020833mg [Eutrema
            salsugineum]
          Length = 411

 Score =  456 bits (1173), Expect = e-125
 Identities = 236/391 (60%), Positives = 289/391 (73%), Gaps = 6/391 (1%)
 Frame = -3

Query: 1541 EAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESHHPTKPFDSILNEEIAMRG 1362
            +APPKQVA AM+RL QA+R+IADIR+GADR+LEA++ +S   H   P    L E+ +MR 
Sbjct: 26   DAPPKQVAQAMDRLNQAARVIADIRLGADRILEAMFVASHPRHTDMPLQLFLREDASMRQ 85

Query: 1361 HFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 1182
            H QDLR IG++LEESGVL+++LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV
Sbjct: 86   HLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAV 145

Query: 1181 DRTRLALKSFTDQKRRFFPHLD----AEPSLKRHCGMLAPGVDNQEEPSDCGKLEDIISC 1014
            DRTRLALK+FTDQKRRFFPH+D     EPS K+H    +P    +E+P D   L DI S 
Sbjct: 146  DRTRLALKAFTDQKRRFFPHIDDGSKMEPSSKKHHASHSPFEHGREQPVDNKTLPDIQSS 205

Query: 1013 LEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSYRSANSLRPGALSGTTPVD 834
            LE   P++K+ST+GRL+W KRA+ LP S  DD  EAS    ++S++ LR G  +     D
Sbjct: 206  LENLVPNVKVSTYGRLSWLKRANSLPVSGSDDPTEAS-KPFFQSSSKLRSGLQAEV--AD 262

Query: 833  KVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYLHPRGLSVYHVFKHITEYA 654
            KVAVIEL +PS+ RAIVSL+P GS  PDAVAFFSPDEGGSYLH RG SVYHV+KHITE+A
Sbjct: 263  KVAVIELSVPSVFRAIVSLNPPGSVDPDAVAFFSPDEGGSYLHARGFSVYHVYKHITEHA 322

Query: 653  NMALQHFRGVDMDG--TLLSFLQWLGSYQTLFSKPCSKCGRLLSMDRQLSIFLPPVHRSY 480
              ALQ+F G    G   L S L W+ S+++LFSKPCSKCGRLL+MD++ ++ LPP+HR Y
Sbjct: 323  ATALQYFLGFGTGGGTPLYSLLLWICSFESLFSKPCSKCGRLLAMDQKSALILPPLHRPY 382

Query: 479  RQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            ++        K  +  LD  +AYH GCSP D
Sbjct: 383  QELPH---VVKTGEANLDACEAYHAGCSPDD 410


>ref|XP_004515424.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like isoform X1 [Cicer arietinum]
            gi|502174052|ref|XP_004515425.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like isoform
            X2 [Cicer arietinum] gi|502174057|ref|XP_004515426.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 27-like isoform X3 [Cicer arietinum]
          Length = 414

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/414 (57%), Positives = 294/414 (71%), Gaps = 13/414 (3%)
 Frame = -3

Query: 1601 MLQQQPLTRTGAGTTTDP----CGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALY 1434
            M Q Q  T     T T P      EAPPKQVA+AM++LGQA R+IADIRIGADRLLE+L+
Sbjct: 1    MQQSQHSTAATFSTPTPPPSSSSAEAPPKQVALAMDKLGQAERIIADIRIGADRLLESLF 60

Query: 1433 --ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMP 1260
              AS   H   KP    + E+  MR HFQDLR++G++LEE+GVLS+++RSR + WGLHMP
Sbjct: 61   VAASGPPHQRNKPLQVFIQEDTCMRKHFQDLRSLGKELEEAGVLSESVRSRKDFWGLHMP 120

Query: 1259 LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLDA-----EPSLKR 1095
            LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD      E + K+
Sbjct: 121  LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETNESASKK 180

Query: 1094 HCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDS 915
            HCG     ++ +EE S    L D++  LEKE P++KISTF RL W KRAS L SS  + S
Sbjct: 181  HCGSEEVAMEPKEEVSFFRPLPDVLKSLEKEVPNVKISTFERLDWLKRASTLASSTNESS 240

Query: 914  VEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFF 735
            +E    H Y  +N LR G++    P +KVAVIEL  PSI RA++SLHP GST PDAVAFF
Sbjct: 241  LE----HHYHGSNKLRLGSMGMVVP-EKVAVIELLFPSIFRAVISLHPAGSTDPDAVAFF 295

Query: 734  SPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKP 555
            SPDE GSY+H RG SV+HV++HITEYA +ALQ+F     + +L   L W+ SYQ+LFS+ 
Sbjct: 296  SPDESGSYVHARGFSVHHVYRHITEYAAIALQYFLANQAETSLYCLLHWICSYQSLFSRS 355

Query: 554  CSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRIST--KPNDQQLDLIQAYHTGC 399
            CSKC +LL+MD+Q ++ LPPVHR Y +FS S+I +     +Q  D   AYH GC
Sbjct: 356  CSKCSKLLAMDKQSNLLLPPVHRPYWKFSFSKILSIISSKNQNSDTTMAYHIGC 409


>ref|XP_006345446.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Solanum tuberosum]
          Length = 411

 Score =  453 bits (1165), Expect = e-124
 Identities = 234/401 (58%), Positives = 293/401 (73%), Gaps = 7/401 (1%)
 Frame = -3

Query: 1568 AGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESHHPTKPFDSI 1389
            A  + +  G+APPKQVAMA+ERLGQASRLIADIRIGADRLLEAL+ S++  H +KP   I
Sbjct: 18   ATESNEVSGDAPPKQVAMALERLGQASRLIADIRIGADRLLEALFVSAQRQHSSKPLHLI 77

Query: 1388 LNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 1209
              EE +MR H QDLR++GRQLE+SGVL+D+LRSRSNSWGLHMPLVCPDGAVVAYAWKRQL
Sbjct: 78   HKEEASMRQHLQDLRSVGRQLEDSGVLNDSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 137

Query: 1208 AGQAGASAVDRTRLALKSFTDQKRRFFPHLDAEPSLKRHCG-------MLAPGVDNQEEP 1050
            AGQAGASAVDRTRLALK+F  QKRRFFPHLD       +CG       +  P    QEE 
Sbjct: 138  AGQAGASAVDRTRLALKAFNGQKRRFFPHLDT------NCGGEGVTKKLRGPPSSYQEET 191

Query: 1049 SDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSYRSANSL 870
             +     ++++ L+KE P++   ++ RL W  RA+ LPS   ++S+E S  ++++S  +L
Sbjct: 192  CELKTASEVLTHLKKEVPNVITFSYQRLDWLMRATSLPSLTSENSIELSKENTFQSTRTL 251

Query: 869  RPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYLHPRGLS 690
            R G+ S     DKVA+IEL IPS+ RAIVS+ P GS  PDAVAFFSPDEGGSY+H RG S
Sbjct: 252  RQGS-SDDDVSDKVAIIELLIPSVFRAIVSVSPAGSLDPDAVAFFSPDEGGSYIHARGFS 310

Query: 689  VYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLSMDRQLS 510
            V+HVF+H+TE+A MALQHF GV  +  LLS L W+ SYQTL SK CSKC RLLSMD++ +
Sbjct: 311  VHHVFRHMTEHAAMALQHFTGVGTETALLSLLLWVCSYQTLLSKACSKCSRLLSMDKESA 370

Query: 509  IFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            + LPPV+R YR FS+ +  +K  DQ +D  Q +H  C  ++
Sbjct: 371  VLLPPVYRPYRNFSAGKFLSK-EDQSVDSSQCFHIDCFSEE 410


>ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Cucumis sativus]
            gi|449515406|ref|XP_004164740.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27-like [Cucumis
            sativus]
          Length = 421

 Score =  452 bits (1164), Expect = e-124
 Identities = 242/423 (57%), Positives = 299/423 (70%), Gaps = 15/423 (3%)
 Frame = -3

Query: 1607 VRMLQQ--QPLTRTGAGTTTDPCG--EAPPKQVAMAMERLGQASRLIADIRIGADRLLEA 1440
            +R +QQ  Q  T T + +T  P    +APPKQVA+AM+RLG A+RLIADIR+GADRLLEA
Sbjct: 1    MRHIQQPSQGQTATVSPSTHSPPSPDDAPPKQVALAMDRLGHAARLIADIRLGADRLLEA 60

Query: 1439 LYASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMP 1260
            L  +++ H  +KP      E+ +MR H  DLRA+G+QLEESGVLS++L SRSNSWGLHMP
Sbjct: 61   LCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMP 120

Query: 1259 LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD------AEPSLK 1098
            LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHL+       EP+LK
Sbjct: 121  LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEPALK 180

Query: 1097 RHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDD 918
            + C         Q E  D   L DI+SC+EKE P++KI T+ RL W K+AS LPS A ++
Sbjct: 181  KPCFSHGVTDVKQNELIDSRSLSDILSCMEKEVPELKIFTYERLDWLKQASALPSQANEN 240

Query: 917  SVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAF 738
            S+ A   HSY S   + PGAL G TP DK  VIEL IPS+ RA+VSLHPVGS  PDA+AF
Sbjct: 241  SIGALKEHSYHSPR-MSPGAL-GATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALAF 298

Query: 737  FSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSK 558
            FSPDE GS++H RG S YH+F+H+TE+A   LQ+F G      L   L W+ SYQ LFSK
Sbjct: 299  FSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFSK 358

Query: 557  PCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRIS-----TKPNDQQLDLIQAYHTGCSP 393
             CSKCGR LS+++Q  + LPP  R Y+QF +S+ S     T   DQ+LD +QA+H  C  
Sbjct: 359  ACSKCGRRLSVNKQSDLLLPPAVRPYKQFCASKNSSVVPITSLKDQKLDSVQAFHIDCFS 418

Query: 392  QDM 384
            +++
Sbjct: 419  EEI 421


>ref|NP_566345.1| uncharacterized protein [Arabidopsis thaliana]
            gi|75158718|sp|Q8RWM3.1|MED27_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            27; AltName: Full=Mediator of RNA polymerase II
            transcription subunit 3 gi|20260202|gb|AAM12999.1|
            unknown protein [Arabidopsis thaliana]
            gi|56382015|gb|AAV85726.1| At3g09180 [Arabidopsis
            thaliana] gi|332641213|gb|AEE74734.1| uncharacterized
            protein AT3G09180 [Arabidopsis thaliana]
          Length = 402

 Score =  452 bits (1163), Expect = e-124
 Identities = 237/407 (58%), Positives = 289/407 (71%), Gaps = 4/407 (0%)
 Frame = -3

Query: 1595 QQQPLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESH 1416
            Q Q L             +APPKQVA AMERL QA+R+IADIR+GADR+LEA++ +S+  
Sbjct: 6    QSQLLQNPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPR 65

Query: 1415 HPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAV 1236
            H   P    L E+ +MR H QDLR IG++LEESGVL+++LRSRSNSWGLHMPLVCPDGAV
Sbjct: 66   HTDMPLQLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAV 125

Query: 1235 VAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD----AEPSLKRHCGMLAPGV 1068
            VAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPH+D     EPS K+H        
Sbjct: 126  VAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDDGLKMEPSSKKHRASHLLLE 185

Query: 1067 DNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSY 888
            + +EEP D   L DI S LEK  P +K+ST+GRL W KRA+ LP S  DD  EAS    +
Sbjct: 186  NGREEPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEAS-KPIF 244

Query: 887  RSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYL 708
            +S++ LR G    T  VDK+AVIEL  PS+ RAIVSL P GS  PDAVAFFSPDEGGSYL
Sbjct: 245  QSSSKLRSGL--QTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYL 302

Query: 707  HPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLS 528
            H RG SVYHV+KHITE+A  ALQ+F G      L S L W+ S++++FSKPC+KCGRLL+
Sbjct: 303  HARGFSVYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLA 362

Query: 527  MDRQLSIFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            MD++ ++ LPP+HR+Y++         P    LD+ +AYH+ CS  D
Sbjct: 363  MDKKSALILPPLHRAYQEL--------PLALNLDVCEAYHSSCSQDD 401


>ref|XP_002882608.1| hypothetical protein ARALYDRAFT_897068 [Arabidopsis lyrata subsp.
            lyrata] gi|297328448|gb|EFH58867.1| hypothetical protein
            ARALYDRAFT_897068 [Arabidopsis lyrata subsp. lyrata]
          Length = 402

 Score =  451 bits (1161), Expect = e-124
 Identities = 236/407 (57%), Positives = 291/407 (71%), Gaps = 4/407 (0%)
 Frame = -3

Query: 1595 QQQPLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESH 1416
            Q Q L  +          +APPKQVA AMERL QA+R+IADIR+GADR+LEA++ +S+  
Sbjct: 6    QSQLLHNSADAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPR 65

Query: 1415 HPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAV 1236
            H   P    L E+ +MR H QDLR IG++LEESGVL+++LRSRSNSWGLHMPLVCPDGAV
Sbjct: 66   HTDMPLQLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAV 125

Query: 1235 VAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD----AEPSLKRHCGMLAPGV 1068
            VAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPH+D     EPS K+H        
Sbjct: 126  VAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDDGLKMEPSSKKHRASHFLLE 185

Query: 1067 DNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSY 888
            + +EEP D   L DI S LEK  P++K+ST+GRL W KRA+ LP S  DD  E S    +
Sbjct: 186  NGREEPVDYKTLPDIQSRLEKLVPNVKVSTYGRLNWLKRANSLPGSGSDDPTEGS-KPIF 244

Query: 887  RSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYL 708
            +S++ LR G    T  VDK+AVIEL  PS+ RAIVSL+P GS  PDAVAFFSPDEGGSYL
Sbjct: 245  QSSSKLRSGL--QTEVVDKIAVIELSFPSLFRAIVSLNPAGSVDPDAVAFFSPDEGGSYL 302

Query: 707  HPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLS 528
            H RG SVYHV+KH+TE+A  ALQ+F G      L S L W+ S+++LFSKPC+KCGRLL+
Sbjct: 303  HARGFSVYHVYKHMTEHAATALQYFLGFGTGTALYSLLLWICSFESLFSKPCTKCGRLLA 362

Query: 527  MDRQLSIFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            MD++ ++ LPP+HR+Y++         P    LD+ +AYH+ CS  D
Sbjct: 363  MDKKSALILPPLHRAYQEL--------PLALNLDVCEAYHSSCSQDD 401


>ref|XP_006577096.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Glycine max]
          Length = 425

 Score =  451 bits (1160), Expect = e-124
 Identities = 241/421 (57%), Positives = 295/421 (70%), Gaps = 19/421 (4%)
 Frame = -3

Query: 1592 QQPLTRTGA--GTTTDP---------CGEAPPKQVAMAMERLGQASRLIADIRIGADRLL 1446
            QQ L  T A   T+T P           EAPPKQVA AM++LGQA R+IADIRIGADRLL
Sbjct: 9    QQQLQATAAPFSTSTPPPPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIRIGADRLL 68

Query: 1445 EALY-ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGL 1269
            EAL+ A+++ H   KP    L E+  MR + QDLR++G++LEESGVLS+++RSR + WGL
Sbjct: 69   EALFVAAAQPHQGNKPLQVFLKEDACMRQYLQDLRSLGKELEESGVLSESVRSRKDFWGL 128

Query: 1268 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-----AEPS 1104
            HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD     +E +
Sbjct: 129  HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETSESA 188

Query: 1103 LKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAI 924
             K+ CG     VD +E  S    L D++  LEK+ P++KI TF RL W KRAS L  S  
Sbjct: 189  SKKCCGSEEIAVDPKEGISFLRTLPDVLKSLEKDVPNLKILTFERLDWLKRASTLTLSTN 248

Query: 923  DDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAV 744
            ++ +E    H+Y  +N LR G++ GT P +KVAVIEL  P + RA++SLHP GS  PD V
Sbjct: 249  ENYLE----HNYHGSNKLRLGSV-GTVPAEKVAVIELLFPCVFRAVISLHPAGSMDPDVV 303

Query: 743  AFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLF 564
            AFF+PDE GSY+H RG SV+HVF+HITEYA  ALQ+F G   +  L   L W+ SYQTLF
Sbjct: 304  AFFAPDESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQSETCLYFLLHWICSYQTLF 363

Query: 563  SKPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI--STKPNDQQLDLIQAYHTGCSPQ 390
            SKPCSKC RLL+MD+Q ++ LPPVHR Y QFS S+I  +    DQ  D  QAYH  C  +
Sbjct: 364  SKPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLNISSKDQNSDTTQAYHIDCLSE 423

Query: 389  D 387
            +
Sbjct: 424  E 424


>gb|AAM61426.1| unknown [Arabidopsis thaliana]
          Length = 402

 Score =  450 bits (1157), Expect = e-123
 Identities = 236/407 (57%), Positives = 288/407 (70%), Gaps = 4/407 (0%)
 Frame = -3

Query: 1595 QQQPLTRTGAGTTTDPCGEAPPKQVAMAMERLGQASRLIADIRIGADRLLEALYASSESH 1416
            Q Q L             +APPKQVA AMERL QA+R+IADIR+GADR+LEA++ +S+  
Sbjct: 6    QSQLLLNPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPR 65

Query: 1415 HPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGLHMPLVCPDGAV 1236
            H   P    L E+ +MR H QDLR IG++LEESGVL+++LRSRSNSWGLHMPLVCPDGAV
Sbjct: 66   HTDMPLQLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAV 125

Query: 1235 VAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD----AEPSLKRHCGMLAPGV 1068
            VAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPH+D     EPS K+H        
Sbjct: 126  VAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDDGLKMEPSSKKHRASHLLLE 185

Query: 1067 DNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAIDDSVEASIGHSY 888
            + +EEP D   L DI S LEK  P +K+ST+GRL W KRA+ LP S  DD  EAS    +
Sbjct: 186  NGREEPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEAS-KPIF 244

Query: 887  RSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAVAFFSPDEGGSYL 708
            +S++ LR G    T  VDK+AVIEL  PS+ RAIVSL P  S  PDAVAFFSPDEGGSYL
Sbjct: 245  QSSSKLRSGL--QTEVVDKIAVIELSFPSLFRAIVSLSPAASVDPDAVAFFSPDEGGSYL 302

Query: 707  HPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLFSKPCSKCGRLLS 528
            H RG SVYHV+KHITE+A  ALQ+F G      L S L W+ S++++FSKPC+KCGRLL+
Sbjct: 303  HARGFSVYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLA 362

Query: 527  MDRQLSIFLPPVHRSYRQFSSSRISTKPNDQQLDLIQAYHTGCSPQD 387
            MD++ ++ LPP+HR+Y++         P    LD+ +AYH+ CS  D
Sbjct: 363  MDKKSALILPPLHRAYQEL--------PLALNLDVCEAYHSSCSQDD 401


>gb|ESW34962.1| hypothetical protein PHAVU_001G195400g [Phaseolus vulgaris]
          Length = 419

 Score =  449 bits (1156), Expect = e-123
 Identities = 240/422 (56%), Positives = 300/422 (71%), Gaps = 13/422 (3%)
 Frame = -3

Query: 1610 RVRMLQQQPLTRTGAGTTTDP-----CGEAPPKQVAMAMERLGQASRLIADIRIGADRLL 1446
            +++  QQQ  T   + +T  P       EAPPKQVA AM++LGQA R+IADIRIGADRLL
Sbjct: 4    QIQQTQQQATTAPISTSTPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIRIGADRLL 63

Query: 1445 EALY-ASSESHHPTKPFDSILNEEIAMRGHFQDLRAIGRQLEESGVLSDALRSRSNSWGL 1269
            EAL+ A+++ H   KP    L E+  MR + QDLR++G++LEESGVLS++LRSR + WGL
Sbjct: 64   EALFVAAAQPHQGNKPLQIFLKEDACMRQYLQDLRSLGKELEESGVLSESLRSRKDFWGL 123

Query: 1268 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFTDQKRRFFPHLD-----AEPS 1104
            HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALK+FTDQKRRFFPHLD     ++ +
Sbjct: 124  HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLETSDLA 183

Query: 1103 LKRHCGMLAPGVDNQEEPSDCGKLEDIISCLEKEFPDIKISTFGRLAWSKRASLLPSSAI 924
             K+ CG     VD +EE      L D++  +EK+ P +KI TF RL W KRAS L S A 
Sbjct: 184  SKKSCGSEEITVDPKEEIRFLRTLPDVLKSVEKDVPILKILTFERLDWLKRASTLTSLAN 243

Query: 923  DDSVEASIGHSYRSANSLRPGALSGTTPVDKVAVIELFIPSILRAIVSLHPVGSTSPDAV 744
            + S+E    H+Y  +N LR G++ GT   +KVAVIE+  PS+ RA++SLHP GST PDAV
Sbjct: 244  ESSLE----HNYHGSNKLRLGSV-GTVAEEKVAVIEMLFPSVFRAVISLHPAGSTDPDAV 298

Query: 743  AFFSPDEGGSYLHPRGLSVYHVFKHITEYANMALQHFRGVDMDGTLLSFLQWLGSYQTLF 564
            AFFSP E GSY+H RG SV+HVF+HITEYA  ALQ+F G   + +L   L W+ S+QTLF
Sbjct: 299  AFFSPYESGSYVHARGFSVHHVFRHITEYAATALQYFLGNQTETSLYCLLHWICSFQTLF 358

Query: 563  SKPCSKCGRLLSMDRQLSIFLPPVHRSYRQFSSSRI--STKPNDQQLDLIQAYHTGCSPQ 390
            SKPCSKC RLL+MD+Q ++ LPPVHR Y QFS S+I  S    DQ  D  + YH GC  +
Sbjct: 359  SKPCSKCSRLLAMDKQSTLLLPPVHRPYWQFSFSKILLSISSKDQNSD-TKTYHIGCLSE 417

Query: 389  DM 384
            ++
Sbjct: 418  EI 419