BLASTX nr result
ID: Rheum21_contig00013976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013976
(603 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis] 206 3e-51
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 206 4e-51
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 199 6e-49
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 196 5e-48
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 190 2e-46
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 189 7e-46
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 189 7e-46
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 187 2e-45
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 181 1e-43
ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-li... 179 4e-43
ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-li... 179 4e-43
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao] 178 9e-43
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru... 178 9e-43
gb|AFK40175.1| unknown [Medicago truncatula] 174 2e-41
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr... 171 1e-40
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li... 168 1e-39
ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-li... 167 3e-39
ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-li... 167 3e-39
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A... 164 2e-38
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 162 7e-38
>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
Length = 670
Score = 206 bits (525), Expect = 3e-51
Identities = 98/156 (62%), Positives = 125/156 (80%), Gaps = 1/156 (0%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF + GFA++++EE++ KCLTFCINY L P D+VSSWEVYYLNRQLNGSTVQ+A+MDGF
Sbjct: 7 AEFSKVGFALDDEEEILKKCLTFCINYNLKPCDIVSSWEVYYLNRQLNGSTVQNAEMDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
LLHLQ+EQ++AIIKEEPGLH+YSS DVDMIL++E D +E + +PT + +DS
Sbjct: 67 LLHLQDEQKEAIIKEEPGLHIYSSKDVDMILNDEDGDEKEEVPGTPTRNSQDSYSEQFDS 126
Query: 476 SRKTKGTAL-SGKPSDLVTPFEQRTNKFVVQFTINN 580
+ +T G SGKPS L+TPF QRT KFVV+F+IN+
Sbjct: 127 TPQTNGKIFSSGKPSKLITPFGQRTQKFVVKFSINS 162
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 206 bits (524), Expect = 4e-51
Identities = 102/163 (62%), Positives = 132/163 (80%), Gaps = 3/163 (1%)
Frame = +2
Query: 119 EFKRSGFAI--ENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDG 292
EFK+ GF+ E +EEV+ KCLTFCINYKLSPSDLVSSWEVYYLNRQL+ S V +A MDG
Sbjct: 8 EFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVVGNALMDG 67
Query: 293 FLLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYD 472
FLLHLQNEQ++A+IKEEP LH+YSS+DVDMILS+E ++++E IL +P++R D +D
Sbjct: 68 FLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGTPSDRSGRHHADPFD 127
Query: 473 SSRKTKGTALS-GKPSDLVTPFEQRTNKFVVQFTINNQHSEKS 598
S+++T G + S GKPS+ VTPF +RT+KFVVQ T+NN S ++
Sbjct: 128 SAQRTNGNSSSYGKPSNHVTPFGKRTSKFVVQLTVNNPPSAEN 170
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 199 bits (505), Expect = 6e-49
Identities = 93/155 (60%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Frame = +2
Query: 119 EFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGFL 298
EFK+SGF+++++EEV+ KCLTFCINY L PSDLVSSWEVYYLNR L+ STV++A+MDGFL
Sbjct: 8 EFKKSGFSLDDEEEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRLLDESTVRNAEMDGFL 67
Query: 299 LHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDSS 478
LHLQNEQ++A++KEEP L++YSS DVDMIL+ +++D++E + +PT++ L+ + ++S
Sbjct: 68 LHLQNEQKEAVVKEEPNLYIYSSKDVDMILNYDEEDLKEEVPGTPTDKSLKLNSEPFNSP 127
Query: 479 RKTKGTAL-SGKPSDLVTPFEQRTNKFVVQFTINN 580
K+ G SGKPS LVTPF +RT+KFVV+F IN+
Sbjct: 128 PKSYGNGYSSGKPSKLVTPFGRRTDKFVVKFNINS 162
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 196 bits (497), Expect = 5e-48
Identities = 96/157 (61%), Positives = 125/157 (79%), Gaps = 2/157 (1%)
Frame = +2
Query: 116 AEFKRSGFAIENQEE-VINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDG 292
AEF +SGF ++++EE ++ KCLTFCINY L P+DLVSSWEVYYLNRQL+ STVQ+ +MDG
Sbjct: 7 AEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQNGEMDG 66
Query: 293 FLLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYD 472
FLLHLQNEQ++AIIKEEP LH+YSS DVDMIL++E +D++E + +PT+ L+ + +D
Sbjct: 67 FLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGTPTDESQKLNSEPFD 126
Query: 473 SSRKTKGTAL-SGKPSDLVTPFEQRTNKFVVQFTINN 580
S K+ G SGK S VTPF +RT+KFVV+F INN
Sbjct: 127 SIIKSTGNGYSSGKRSKHVTPFGRRTDKFVVKFNINN 163
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 190 bits (483), Expect = 2e-46
Identities = 91/157 (57%), Positives = 122/157 (77%), Gaps = 2/157 (1%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF +S F ++ ++E++ KCLTFCINYKL+PSDLVSSWE+YYLNRQLN V+D +M+GF
Sbjct: 7 AEFIKSDFTLDQEDEILKKCLTFCINYKLTPSDLVSSWEIYYLNRQLNEPVVRDVEMEGF 66
Query: 296 LLHLQNEQRDAI-IKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYD 472
L HLQNEQ++AI KEEPGLH+YSS+DVDMIL+ E D+ E +L +P ++ D +D
Sbjct: 67 LQHLQNEQKEAINSKEEPGLHIYSSNDVDMILNGEDVDIEETVLHTPISKSQNRYSDSFD 126
Query: 473 SSRKTKGTA-LSGKPSDLVTPFEQRTNKFVVQFTINN 580
S+ +T G SGKP+ L+TPF +RT+KFVV+F+I N
Sbjct: 127 STPQTNGNVPSSGKPTKLITPFGRRTDKFVVKFSIEN 163
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 189 bits (479), Expect = 7e-46
Identities = 95/156 (60%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF+++GF ++ EV+ KCLTFCINY L PSDLVSSWEVYYLNRQL+ STV+D +MDGF
Sbjct: 7 AEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
+LHLQNEQ++AIIKEEP LH+YSS DVDMIL+ E +++ E IL +PT+ L D DS
Sbjct: 67 MLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTDN-LKLYSDALDS 125
Query: 476 SRKTKGTALSG-KPSDLVTPFEQRTNKFVVQFTINN 580
+ K S KPS L TPF +RT K VV+F INN
Sbjct: 126 TYKANANGYSSDKPSKLATPFGRRTEKLVVKFNINN 161
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 189 bits (479), Expect = 7e-46
Identities = 95/156 (60%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF+++GF ++ EV+ KCLTFCINY L PSDLVSSWEVYYLNRQL+ STV+D +MDGF
Sbjct: 7 AEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
+LHLQNEQ++AIIKEEP LH+YSS DVDMIL+ E +++ E IL +PT+ L D DS
Sbjct: 67 MLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTDN-LKLYSDALDS 125
Query: 476 SRKTKGTALSG-KPSDLVTPFEQRTNKFVVQFTINN 580
+ K S KPS L TPF +RT K VV+F INN
Sbjct: 126 TYKANANGYSSDKPSKLATPFGRRTEKLVVKFNINN 161
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 187 bits (474), Expect = 2e-45
Identities = 90/155 (58%), Positives = 116/155 (74%), Gaps = 1/155 (0%)
Frame = +2
Query: 119 EFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGFL 298
EFKRSGF + +EE++ KC+TFC+NY L PSD+VSSWEVYYLNR L+GS V+ Q+DGFL
Sbjct: 8 EFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVELEQLDGFL 67
Query: 299 LHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDSS 478
HLQNEQ++ +IK EP LHVYSS DVD+IL++E +D+ E IL +P + +L ++ D +
Sbjct: 68 QHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLHKERLDLT 127
Query: 479 RKT-KGTALSGKPSDLVTPFEQRTNKFVVQFTINN 580
T +G SGKPS TPF QRT KFVV+F INN
Sbjct: 128 PYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNINN 162
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 181 bits (459), Expect = 1e-43
Identities = 88/160 (55%), Positives = 122/160 (76%), Gaps = 4/160 (2%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF SGF + ++E++ KC TFCIN+KL+P+DLVSSWE+YYLNRQ+NG+ V+DA+MDGF
Sbjct: 7 AEFNNSGFIFDKEKEILQKCSTFCINFKLTPTDLVSSWEIYYLNRQINGTVVEDAEMDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIY-- 469
L +LQ++Q+ AI ++E LH+YSS DVDMIL++E +D+RE +L +P P Q+ Y
Sbjct: 67 LGYLQSQQKVAIDEKELDLHIYSSRDVDMILNDEDEDIREDVLGTP---PPFKSQNHYSE 123
Query: 470 --DSSRKTKGTALSGKPSDLVTPFEQRTNKFVVQFTINNQ 583
DS+ +T G SGKPS L TPF +RT+K VV+F+INN+
Sbjct: 124 PSDSTPQTIGNISSGKPSKLATPFGRRTDKLVVKFSINNK 163
>ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Cicer
arietinum]
Length = 524
Score = 179 bits (455), Expect = 4e-43
Identities = 82/154 (53%), Positives = 116/154 (75%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFK++GF ++ +EE+++KCLTFCINY L+PSDLVSSWEVYYLNRQLN TV++A+M+GF
Sbjct: 7 SEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLNEPTVENAEMEGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
L+HLQN ++ IIKEE GLH+YS DV+MIL+ DD+++ +PTN + +D+
Sbjct: 67 LIHLQNITKEDIIKEETGLHLYSIKDVEMILNNVDDDIKDDTPSTPTNHHQNVYSPTHDT 126
Query: 476 SRKTKGTALSGKPSDLVTPFEQRTNKFVVQFTIN 577
SGKP++LVTPF +R ++F V+F+IN
Sbjct: 127 PSLYGNVLASGKPANLVTPFSKRKDRFAVKFSIN 160
>ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Cicer
arietinum]
Length = 616
Score = 179 bits (455), Expect = 4e-43
Identities = 82/154 (53%), Positives = 116/154 (75%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFK++GF ++ +EE+++KCLTFCINY L+PSDLVSSWEVYYLNRQLN TV++A+M+GF
Sbjct: 7 SEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLNEPTVENAEMEGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
L+HLQN ++ IIKEE GLH+YS DV+MIL+ DD+++ +PTN + +D+
Sbjct: 67 LIHLQNITKEDIIKEETGLHLYSIKDVEMILNNVDDDIKDDTPSTPTNHHQNVYSPTHDT 126
Query: 476 SRKTKGTALSGKPSDLVTPFEQRTNKFVVQFTIN 577
SGKP++LVTPF +R ++F V+F+IN
Sbjct: 127 PSLYGNVLASGKPANLVTPFSKRKDRFAVKFSIN 160
>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
Length = 621
Score = 178 bits (452), Expect = 9e-43
Identities = 85/156 (54%), Positives = 116/156 (74%), Gaps = 1/156 (0%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF ++GF ++ +EE++ KC FC+N+ L PSDLVSSWEVYYLNRQL+ S V+DA+MDGF
Sbjct: 7 AEFLKNGFTLDEEEEILKKCHMFCLNFSLKPSDLVSSWEVYYLNRQLDESVVKDAEMDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
HLQNEQ +A++K+EP L++YS DVDMIL E +D +E IL +PT++ L D+YDS
Sbjct: 67 SGHLQNEQVEAVVKKEPDLYMYSFKDVDMILDAEDEDTKEVILRTPTDKSEKLHSDLYDS 126
Query: 476 SRKTKGTALSGKPS-DLVTPFEQRTNKFVVQFTINN 580
++KT S + + VTPF R+NKFVV+F I+N
Sbjct: 127 AQKTNSNIYSSRRTPKQVTPFGTRSNKFVVKFNIDN 162
>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
B [Medicago truncatula]
Length = 616
Score = 178 bits (452), Expect = 9e-43
Identities = 85/154 (55%), Positives = 116/154 (75%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFK++GF + +EE+++KCLTFCINY L+PSDLVSSWEVYYLNRQL+ VQ+A+M+GF
Sbjct: 7 SEFKKAGFDFDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLDEPIVQNAEMEGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
+LHLQN +D IIKEE GLH+YS DV+MIL++ DD ++ +PTN + I+D+
Sbjct: 67 MLHLQNNVKDDIIKEETGLHLYSIGDVEMILND--DDTKDDTPSTPTNNRQDVYSPIHDT 124
Query: 476 SRKTKGTALSGKPSDLVTPFEQRTNKFVVQFTIN 577
SGKP+DLVTPF +RT++F V+F+IN
Sbjct: 125 PSLYGNILASGKPADLVTPFSKRTDRFAVKFSIN 158
>gb|AFK40175.1| unknown [Medicago truncatula]
Length = 447
Score = 174 bits (440), Expect = 2e-41
Identities = 84/154 (54%), Positives = 115/154 (74%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFK++GF + +EE+++K LTFCINY L+PSDLVSSWEVYYLNRQL+ VQ+A+M+GF
Sbjct: 7 SEFKKAGFDFDEEEEILSKRLTFCINYSLTPSDLVSSWEVYYLNRQLDEPIVQNAEMEGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
+LHLQN +D IIKEE GLH+YS DV+MIL++ DD ++ +PTN + I+D+
Sbjct: 67 MLHLQNNVKDDIIKEETGLHLYSIGDVEMILND--DDTKDDTPSTPTNNRQDVYSPIHDT 124
Query: 476 SRKTKGTALSGKPSDLVTPFEQRTNKFVVQFTIN 577
SGKP+DLVTPF +RT++F V+F+IN
Sbjct: 125 PSLYGNILASGKPADLVTPFSKRTDRFAVKFSIN 158
>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
gi|557087677|gb|ESQ28529.1| hypothetical protein
EUTSA_v10018287mg [Eutrema salsugineum]
Length = 622
Score = 171 bits (434), Expect = 1e-40
Identities = 83/155 (53%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = +2
Query: 119 EFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGFL 298
EF RSGFA+ +EE++ +C+T CINY L PS+LVSSWE+Y+LNRQ+ TV+ +MDGFL
Sbjct: 10 EFNRSGFALVEEEEILERCVTLCINYSLKPSELVSSWELYHLNRQIIDQTVKKDEMDGFL 69
Query: 299 LHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDSS 478
LHLQN+QR++I+KEE GLH+YS+ DVDMIL +D E + +PTN L D +DS
Sbjct: 70 LHLQNQQRESIMKEEAGLHIYSNRDVDMILDGIPEDTTEETVTTPTNNSQRLHPDPFDSI 129
Query: 479 RKTKGTALS-GKPSDLVTPFEQRTNKFVVQFTINN 580
++K S GK + VTPF +R +KFVV+F I N
Sbjct: 130 NRSKDYGYSTGKSAGHVTPFARRIDKFVVKFNIGN 164
>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 168 bits (425), Expect = 1e-39
Identities = 85/159 (53%), Positives = 118/159 (74%), Gaps = 5/159 (3%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFKRSGF +E+++E+++KC+T+CINY L+PSDLVSSWEVYYLNRQLN VQ+ ++DGF
Sbjct: 7 SEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQNTEIDGF 66
Query: 296 LLHLQNEQRDAII--KEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTN-RPSTLDQDI 466
LLHLQNE+++ +I KEE GLH+YS DV+MIL+ + DD ++ +P N L +
Sbjct: 67 LLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNND-DDTKDNTPGTPINHHQDPLSPAL 125
Query: 467 YDSSRKTKGTALSGKP--SDLVTPFEQRTNKFVVQFTIN 577
+S + SGKP S L+TPF +RT+KFVV+F+IN
Sbjct: 126 DTTSLMYENVLSSGKPSKSKLITPFSKRTDKFVVKFSIN 164
>ref|XP_006591473.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Glycine
max]
Length = 577
Score = 167 bits (422), Expect = 3e-39
Identities = 87/159 (54%), Positives = 117/159 (73%), Gaps = 5/159 (3%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFKRSGF +E+++E+++KC+TFCINY L+PSDLVSSWEVYYLNRQLN VQ+A++DGF
Sbjct: 7 SEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQNAEIDGF 66
Query: 296 LLHLQNEQRDAII--KEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIY 469
LLHLQNE+++ +I KEE GLH+YS DV+MIL+ + DD ++ +P N
Sbjct: 67 LLHLQNEKKEDVIKEKEEAGLHIYSIGDVEMILNND-DDTKDNTPGTPINHHQDPLSPAP 125
Query: 470 DS-SRKTKGTALSGKP--SDLVTPFEQRTNKFVVQFTIN 577
D+ S + SGKP S LVTPF +RT+KF V+F+IN
Sbjct: 126 DTPSLMYENVLSSGKPSKSKLVTPFSKRTDKFAVKFSIN 164
>ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Glycine
max]
Length = 605
Score = 167 bits (422), Expect = 3e-39
Identities = 87/159 (54%), Positives = 117/159 (73%), Gaps = 5/159 (3%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EFKRSGF +E+++E+++KC+TFCINY L+PSDLVSSWEVYYLNRQLN VQ+A++DGF
Sbjct: 7 SEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQNAEIDGF 66
Query: 296 LLHLQNEQRDAII--KEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIY 469
LLHLQNE+++ +I KEE GLH+YS DV+MIL+ + DD ++ +P N
Sbjct: 67 LLHLQNEKKEDVIKEKEEAGLHIYSIGDVEMILNND-DDTKDNTPGTPINHHQDPLSPAP 125
Query: 470 DS-SRKTKGTALSGKP--SDLVTPFEQRTNKFVVQFTIN 577
D+ S + SGKP S LVTPF +RT+KF V+F+IN
Sbjct: 126 DTPSLMYENVLSSGKPSKSKLVTPFSKRTDKFAVKFSIN 164
>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
gi|548862999|gb|ERN20355.1| hypothetical protein
AMTR_s00066p00201540 [Amborella trichopoda]
Length = 628
Score = 164 bits (414), Expect = 2e-38
Identities = 85/172 (49%), Positives = 117/172 (68%), Gaps = 10/172 (5%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
+EF + F++E+++E++NKC+ FCINYKLSPSDLVSSW VYYLN QL+GS VQ+A +DGF
Sbjct: 7 SEFIENNFSLEDEDEILNKCVAFCINYKLSPSDLVSSWVVYYLNMQLDGSKVQNAHVDGF 66
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRP-----STLDQ 460
L HLQN+Q+ I+KEE +H+YSS+DV+M+L EE D EG+LD+P + + L
Sbjct: 67 LHHLQNKQKHNILKEESNVHMYSSNDVNMLLGEEHKDGEEGMLDTPIKQSYFDNLNDLST 126
Query: 461 DI-YDSSRKTKGTALSGK----PSDLVTPFEQRTNKFVVQFTINNQHSEKST 601
I D S + G ++S K S TPF QRTNKF++Q + N+ T
Sbjct: 127 PISMDRSPERNGKSISEKSSRRTSSQATPFGQRTNKFLLQLSFNSHSKADDT 178
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 162 bits (410), Expect = 7e-38
Identities = 83/162 (51%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Frame = +2
Query: 116 AEFKRSGFAIENQEEVINKCLTFCINYKLSPSDLVSSWEVYYLNRQLNGSTVQDAQMDGF 295
AEF ++GF+++++ E++NKCLTFCI Y LSPSDLVSSW+VY LNR L TVQ + M F
Sbjct: 7 AEFLKNGFSLDDEAEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQ-LTVQSSHMGAF 65
Query: 296 LLHLQNEQRDAIIKEEPGLHVYSSHDVDMILSEEQDDVREGILDSPTNRPSTLDQDIYDS 475
L LQNE+R+ I+K+EPGLH YSS D+ M+L++E ++ +E IL +PT++ T + S
Sbjct: 66 LQQLQNERREDIVKKEPGLHFYSS-DISMMLNDEYENTKEIILGTPTDKRKTSQSETIVS 124
Query: 476 SRKTKGT-ALSGKPSDLVTPFEQRTNKFVVQFTINNQHSEKS 598
+RKT G+ + S K + +TPF QR +KFVVQFT+N + +S
Sbjct: 125 ARKTNGSISTSRKHLETITPFGQRKSKFVVQFTLNENANGES 166